Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46445982

Identifier: 46445982

GI number: 46445982

Start: 473214

End: 475064

Strand: Direct

Name: 46445982

Synonym: pc0348

Alternate gene names: NA

Gene position: 473214-475064 (Clockwise)

Preceding gene: 46445980

Following gene: 46445984

Centisome position: 19.6

GC content: 30.36

Gene sequence:

>1851_bases
TTGGTTGTTAAATTAATTTTTAAAATTTTAATGGTTTTTATGTATAATAATTGTTTTTTTACAAATAATTTTTTTAGTGA
ATTAGATTTTACATTTGATATTTTTAATTTCCCAAAAAGTTGCGAAAATAGTTTAAATAATTTTATTAGCAAGGAAGATA
AACGAAATTATTCTTCCTTTCGTAAAATTAAAAAAGTAAGAGAAAAAGGTATTTCATCTAAAACACAAATATTTAAAAGA
AGGGTTTTTAATGAAAGAAGTATTCCGACAGATTTTCTATCTAAAAGAAAGAAAAAACCTGTAATTATAAGAAAATCTTC
TTTGAACCTTACAAGTTTATCAAAAATGGCAAGGATTCCCCATTTGTGCGAAGATACGACAAAGGAACATATCGATAACA
AATTTGATGGAAAGAATAGCCAAGTTTTAAATGTTTGTTTTCTAGACAGTCAATTAACTATTAATTATTCACCGATTAGA
TTTTCTGAAAGTAAGGAATCAGAATCGAACGAAAGGATGTCCACTGAATTTAAATTTGATGAAGCTTCAATTGATTATTC
TTCAGAAGGTAATGAATCAACTATTGCTTATTCACCGATTAGATTTTCTGAAAGTAGGGAATCAGAATCGAATGAAAGGA
TGTCCACTGAATTTAAACTTGATGAAGCTTCAATTGATTATTCGTCAGAAGTTAATGAATCAACTGTTGATTATTCACCG
ATTAGGTTTTTTGAAAGTGAGGAATTAGAATCGACTGAAAGGATGTTCGTAGAATCTAAATTTGATGAAGCTTCAATTGA
TTATTCGTCAGAAGGTAATGAATCAACTATTGATTATTCAATTTCTGCAGCCTTGCAAGAATTTGAACCTGTAAGTTTAG
ATAGCGATTTTTTTGAACAGCAAAAACCAAAAGAATGGTTTCCCATTAAAATCGATGGGAATAATAAAATAAGTTTTTCG
ATTAATGCAAATGCTAAAAAAATCAAACAATTGATTTACATATTTAGAAATCATACAACTGACGAAATTGCTTTAATAGG
GAAAACAGGAACTTCTTTTTCTGCTCGGATGAATCATTACAAAACTAAATTTAATAAAAGTGTTAAACCATCCAATCAAA
GTAAAAAGAAATTTATTACTGCAGTTCAAAACAATCCTACTCATTTTGAAGTGGCTATTTTATATGTTTTAAAAGAAGGG
GAAAATTTAGATACGTTTGAAACAGGTTTTATTAAAAGTAAAAAACCTCTCTATAATCAGCGAAACGGAGGAGGGGGTGG
TTTAACTCATTCGGAAGAAGTATCAGCAATTTATGCAATTCCAAAAAATCCCCTTCTTTTAACTCCAGAAAAAAGGTTTC
GTTTTAGAGTAATTGACACTTCTATTAGACCTGAAATTGATCAAGAAATTTATAAAAAGATGCTTTCAATCGCTGATAAA
GTTCAAGGAATTTTATATTCCATTAAAGAAATAGGAACTGAAAAACGTTATATTGGCTACACGACAGGGAATAATCCACA
CACCCGTATTAGACAACATGGTTATCAAGCTCAAACCTTTTTTCCTTTTAGCGATCAATATGATCCTGAAGAGAAGGATG
GAGCATTGCATCCAGCCATGGGACAGAATCCTGAAGGGTTTAGTTTTGGATTTTTACCTATATTACATGATTTGAGTGAA
ATGAAACTTGACGAATTAAATGAATATGCAATTGTTTCAACCATTGGTGAAGCAGAAAAAACCGCCATCAAAATTTTAAA
AACTTTGGTTAGTCAAGGAGGATTTAATTGCAATGGCGGCGGTGGCGGGCCGATTTCAGGGGGTATTGCCCGAAGATTGA
ATTTTGATTAG

Upstream 100 bases:

>100_bases
TTTAAACGAATACAATTAGTAAATTCAATTTTTAATTATTATTAAACTATATAGATTTTAATTTTTATACTAATTAAAAC
GGCATATTTTATATAATTAA

Downstream 100 bases:

>100_bases
ACAAAACTTTAATTTTGAAACTTCTTTTCATTTATTATGATTCAATGAAACTCTCTACTTAAAATGATTTAGAGTTAAAA
ATTTTTCGCTTTTATATAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 616; Mature: 616

Protein sequence:

>616_residues
MVVKLIFKILMVFMYNNCFFTNNFFSELDFTFDIFNFPKSCENSLNNFISKEDKRNYSSFRKIKKVREKGISSKTQIFKR
RVFNERSIPTDFLSKRKKKPVIIRKSSLNLTSLSKMARIPHLCEDTTKEHIDNKFDGKNSQVLNVCFLDSQLTINYSPIR
FSESKESESNERMSTEFKFDEASIDYSSEGNESTIAYSPIRFSESRESESNERMSTEFKLDEASIDYSSEVNESTVDYSP
IRFFESEELESTERMFVESKFDEASIDYSSEGNESTIDYSISAALQEFEPVSLDSDFFEQQKPKEWFPIKIDGNNKISFS
INANAKKIKQLIYIFRNHTTDEIALIGKTGTSFSARMNHYKTKFNKSVKPSNQSKKKFITAVQNNPTHFEVAILYVLKEG
ENLDTFETGFIKSKKPLYNQRNGGGGGLTHSEEVSAIYAIPKNPLLLTPEKRFRFRVIDTSIRPEIDQEIYKKMLSIADK
VQGILYSIKEIGTEKRYIGYTTGNNPHTRIRQHGYQAQTFFPFSDQYDPEEKDGALHPAMGQNPEGFSFGFLPILHDLSE
MKLDELNEYAIVSTIGEAEKTAIKILKTLVSQGGFNCNGGGGGPISGGIARRLNFD

Sequences:

>Translated_616_residues
MVVKLIFKILMVFMYNNCFFTNNFFSELDFTFDIFNFPKSCENSLNNFISKEDKRNYSSFRKIKKVREKGISSKTQIFKR
RVFNERSIPTDFLSKRKKKPVIIRKSSLNLTSLSKMARIPHLCEDTTKEHIDNKFDGKNSQVLNVCFLDSQLTINYSPIR
FSESKESESNERMSTEFKFDEASIDYSSEGNESTIAYSPIRFSESRESESNERMSTEFKLDEASIDYSSEVNESTVDYSP
IRFFESEELESTERMFVESKFDEASIDYSSEGNESTIDYSISAALQEFEPVSLDSDFFEQQKPKEWFPIKIDGNNKISFS
INANAKKIKQLIYIFRNHTTDEIALIGKTGTSFSARMNHYKTKFNKSVKPSNQSKKKFITAVQNNPTHFEVAILYVLKEG
ENLDTFETGFIKSKKPLYNQRNGGGGGLTHSEEVSAIYAIPKNPLLLTPEKRFRFRVIDTSIRPEIDQEIYKKMLSIADK
VQGILYSIKEIGTEKRYIGYTTGNNPHTRIRQHGYQAQTFFPFSDQYDPEEKDGALHPAMGQNPEGFSFGFLPILHDLSE
MKLDELNEYAIVSTIGEAEKTAIKILKTLVSQGGFNCNGGGGGPISGGIARRLNFD
>Mature_616_residues
MVVKLIFKILMVFMYNNCFFTNNFFSELDFTFDIFNFPKSCENSLNNFISKEDKRNYSSFRKIKKVREKGISSKTQIFKR
RVFNERSIPTDFLSKRKKKPVIIRKSSLNLTSLSKMARIPHLCEDTTKEHIDNKFDGKNSQVLNVCFLDSQLTINYSPIR
FSESKESESNERMSTEFKFDEASIDYSSEGNESTIAYSPIRFSESRESESNERMSTEFKLDEASIDYSSEVNESTVDYSP
IRFFESEELESTERMFVESKFDEASIDYSSEGNESTIDYSISAALQEFEPVSLDSDFFEQQKPKEWFPIKIDGNNKISFS
INANAKKIKQLIYIFRNHTTDEIALIGKTGTSFSARMNHYKTKFNKSVKPSNQSKKKFITAVQNNPTHFEVAILYVLKEG
ENLDTFETGFIKSKKPLYNQRNGGGGGLTHSEEVSAIYAIPKNPLLLTPEKRFRFRVIDTSIRPEIDQEIYKKMLSIADK
VQGILYSIKEIGTEKRYIGYTTGNNPHTRIRQHGYQAQTFFPFSDQYDPEEKDGALHPAMGQNPEGFSFGFLPILHDLSE
MKLDELNEYAIVSTIGEAEKTAIKILKTLVSQGGFNCNGGGGGPISGGIARRLNFD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 70503; Mature: 70503

Theoretical pI: Translated: 6.86; Mature: 6.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVVKLIFKILMVFMYNNCFFTNNFFSELDFTFDIFNFPKSCENSLNNFISKEDKRNYSSF
CHHHHHHHHHHHHHHCCEEEECCHHHHCCCEEEECCCCHHHHHHHHHHHCCHHHCCHHHH
RKIKKVREKGISSKTQIFKRRVFNERSIPTDFLSKRKKKPVIIRKSSLNLTSLSKMARIP
HHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHCCCCCEEEEECCCCHHHHHHHHHCC
HLCEDTTKEHIDNKFDGKNSQVLNVCFLDSQLTINYSPIRFSESKESESNERMSTEFKFD
HHHHHHHHHHCCCCCCCCCCCEEEEEEECCEEEEEECCEEECCCCCCCCHHHHCCEEEEC
EASIDYSSEGNESTIAYSPIRFSESRESESNERMSTEFKLDEASIDYSSEVNESTVDYSP
CCCCCCCCCCCCCEEEECCEECCCCCCCCCHHHHCCEEEECCCCCCCCCCCCCCCCCCCC
IRFFESEELESTERMFVESKFDEASIDYSSEGNESTIDYSISAALQEFEPVSLDSDFFEQ
CEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEHHHHHHHHHCCCCCCCHHHHHH
QKPKEWFPIKIDGNNKISFSINANAKKIKQLIYIFRNHTTDEIALIGKTGTSFSARMNHY
CCCCCCCCEEECCCCEEEEEECCCHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHH
KTKFNKSVKPSNQSKKKFITAVQNNPTHFEVAILYVLKEGENLDTFETGFIKSKKPLYNQ
HHHHCCCCCCCCCCHHHEEEEECCCCCEEEEEEEEEEECCCCCCCHHHCCCCCCCCCCCC
RNGGGGGLTHSEEVSAIYAIPKNPLLLTPEKRFRFRVIDTSIRPEIDQEIYKKMLSIADK
CCCCCCCCCCCCCCEEEEEECCCCEEECCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHH
VQGILYSIKEIGTEKRYIGYTTGNNPHTRIRQHGYQAQTFFPFSDQYDPEEKDGALHPAM
HHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCC
GQNPEGFSFGFLPILHDLSEMKLDELNEYAIVSTIGEAEKTAIKILKTLVSQGGFNCNGG
CCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEHHHCHHHHHHHHHHHHHHHCCCCCCCCC
GGGPISGGIARRLNFD
CCCCCCCCHHHCCCCC
>Mature Secondary Structure
MVVKLIFKILMVFMYNNCFFTNNFFSELDFTFDIFNFPKSCENSLNNFISKEDKRNYSSF
CHHHHHHHHHHHHHHCCEEEECCHHHHCCCEEEECCCCHHHHHHHHHHHCCHHHCCHHHH
RKIKKVREKGISSKTQIFKRRVFNERSIPTDFLSKRKKKPVIIRKSSLNLTSLSKMARIP
HHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHCCCCCEEEEECCCCHHHHHHHHHCC
HLCEDTTKEHIDNKFDGKNSQVLNVCFLDSQLTINYSPIRFSESKESESNERMSTEFKFD
HHHHHHHHHHCCCCCCCCCCCEEEEEEECCEEEEEECCEEECCCCCCCCHHHHCCEEEEC
EASIDYSSEGNESTIAYSPIRFSESRESESNERMSTEFKLDEASIDYSSEVNESTVDYSP
CCCCCCCCCCCCCEEEECCEECCCCCCCCCHHHHCCEEEECCCCCCCCCCCCCCCCCCCC
IRFFESEELESTERMFVESKFDEASIDYSSEGNESTIDYSISAALQEFEPVSLDSDFFEQ
CEECCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEHHHHHHHHHCCCCCCCHHHHHH
QKPKEWFPIKIDGNNKISFSINANAKKIKQLIYIFRNHTTDEIALIGKTGTSFSARMNHY
CCCCCCCCEEECCCCEEEEEECCCHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHH
KTKFNKSVKPSNQSKKKFITAVQNNPTHFEVAILYVLKEGENLDTFETGFIKSKKPLYNQ
HHHHCCCCCCCCCCHHHEEEEECCCCCEEEEEEEEEEECCCCCCCHHHCCCCCCCCCCCC
RNGGGGGLTHSEEVSAIYAIPKNPLLLTPEKRFRFRVIDTSIRPEIDQEIYKKMLSIADK
CCCCCCCCCCCCCCEEEEEECCCCEEECCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHH
VQGILYSIKEIGTEKRYIGYTTGNNPHTRIRQHGYQAQTFFPFSDQYDPEEKDGALHPAM
HHHHHHHHHHHCCCCEEEEEECCCCCHHHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCC
GQNPEGFSFGFLPILHDLSEMKLDELNEYAIVSTIGEAEKTAIKILKTLVSQGGFNCNGG
CCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEHHHCHHHHHHHHHHHHHHHCCCCCCCCC
GGGPISGGIARRLNFD
CCCCCCCCHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA