Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46445966

Identifier: 46445966

GI number: 46445966

Start: 451857

End: 452843

Strand: Direct

Name: 46445966

Synonym: pc0332

Alternate gene names: NA

Gene position: 451857-452843 (Clockwise)

Preceding gene: 46445965

Following gene: 46445974

Centisome position: 18.71

GC content: 34.35

Gene sequence:

>987_bases
ATGAAAAATATTTTTTTTTGGTCAATTTTAATGATACTATTAACTTCCTCAGTTTATACCAATGAATTAATGCATCGATC
TCTTTTGGTAACGGAGAAAAAACAAGATATTTTTGTTTGGGAAGAAATGCTATTAAATTCTTTTGATGAATTAATTGTAT
CTTGGGATGCAAAAAGGCCAGTAGAGGGGTCATACTTAATTCAAGTAAGTTTGTTTATTAAAGAATGGTCTCCATGGCTT
GATTATGCGTTTTGGGGTGCCCATGATCAATATACATTTAAAAAAAAATTATCTAAAGCAAACTTACAAGTCTGTCAAAA
TATTGTTGAGGTTCTAAAAGGCAATAAAGCGAACGGATTCCGAATTCGTGTAATAGCGAAAGATAATGCTTCTTTAGAGC
AATTTAGAACGTTGCATATTTCTGCTACAGATCATACTACACATAAAGTTATTGCAACCGCTTTCGAAAATATATTCATT
AACTTAGAAATTGCTGGACTTTCTCAAATTACTTTACCCGATGAACGTCACTTGCGTTTATGCTCGCCAACTTCTACAAC
TGCTGTAATACGGTTTTTATCAAATTCTTTGAATCTCTCACCGCTTGAATTTGCAGATACCGTTATAGACTCTGCATTCG
ATATATATGGGAGCTGGATTTTAAACACTGCACAAGCTTCCCACAAACTCGGAAATCCTTGGAATTGCTTTGTAGCTCGC
TTTACAAATTTTAACCAAATTGTTGATCAATTACGTAAAGGATATCCTGTTGTAGTAAGCGTAAAAGGACCATTAAAAGG
CAGTGCTCTTCCTTATGAGTCAGGACACTTATTAGTGGTGAAAGGGTATGATTCAAAAAAACAAGAAGTATTTTGTATAG
ATCCAGCGTTTTCTACAAATGAGTTAACCCATGTCACATATGCTTTGGATGATTTTCTGGTAGCTTGGGGTAGACGAAAA
GGAATCGCTTACGTTTTCGATCAGTAA

Upstream 100 bases:

>100_bases
AGTTTTAAGATAACAAAAAGAAGTTCAAAATATATATATAACCCTATAGTTTTATATATATTTTAATTTTGTTTTTTATT
TTTAGAATGCAAGGCTTTTG

Downstream 100 bases:

>100_bases
GATTTTAAATCAAATCTTCATAAGTAAACTATTTTTTGCCCTGTCATCTATGAATCTTTGATTTTAAGTAATTGCTTATT
CAATTGAAGGAGGTTAATAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 328; Mature: 328

Protein sequence:

>328_residues
MKNIFFWSILMILLTSSVYTNELMHRSLLVTEKKQDIFVWEEMLLNSFDELIVSWDAKRPVEGSYLIQVSLFIKEWSPWL
DYAFWGAHDQYTFKKKLSKANLQVCQNIVEVLKGNKANGFRIRVIAKDNASLEQFRTLHISATDHTTHKVIATAFENIFI
NLEIAGLSQITLPDERHLRLCSPTSTTAVIRFLSNSLNLSPLEFADTVIDSAFDIYGSWILNTAQASHKLGNPWNCFVAR
FTNFNQIVDQLRKGYPVVVSVKGPLKGSALPYESGHLLVVKGYDSKKQEVFCIDPAFSTNELTHVTYALDDFLVAWGRRK
GIAYVFDQ

Sequences:

>Translated_328_residues
MKNIFFWSILMILLTSSVYTNELMHRSLLVTEKKQDIFVWEEMLLNSFDELIVSWDAKRPVEGSYLIQVSLFIKEWSPWL
DYAFWGAHDQYTFKKKLSKANLQVCQNIVEVLKGNKANGFRIRVIAKDNASLEQFRTLHISATDHTTHKVIATAFENIFI
NLEIAGLSQITLPDERHLRLCSPTSTTAVIRFLSNSLNLSPLEFADTVIDSAFDIYGSWILNTAQASHKLGNPWNCFVAR
FTNFNQIVDQLRKGYPVVVSVKGPLKGSALPYESGHLLVVKGYDSKKQEVFCIDPAFSTNELTHVTYALDDFLVAWGRRK
GIAYVFDQ
>Mature_328_residues
MKNIFFWSILMILLTSSVYTNELMHRSLLVTEKKQDIFVWEEMLLNSFDELIVSWDAKRPVEGSYLIQVSLFIKEWSPWL
DYAFWGAHDQYTFKKKLSKANLQVCQNIVEVLKGNKANGFRIRVIAKDNASLEQFRTLHISATDHTTHKVIATAFENIFI
NLEIAGLSQITLPDERHLRLCSPTSTTAVIRFLSNSLNLSPLEFADTVIDSAFDIYGSWILNTAQASHKLGNPWNCFVAR
FTNFNQIVDQLRKGYPVVVSVKGPLKGSALPYESGHLLVVKGYDSKKQEVFCIDPAFSTNELTHVTYALDDFLVAWGRRK
GIAYVFDQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37441; Mature: 37441

Theoretical pI: Translated: 7.63; Mature: 7.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNIFFWSILMILLTSSVYTNELMHRSLLVTEKKQDIFVWEEMLLNSFDELIVSWDAKRP
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHEECCCCCC
VEGSYLIQVSLFIKEWSPWLDYAFWGAHDQYTFKKKLSKANLQVCQNIVEVLKGNKANGF
CCCCEEEEEEEEEECCCHHHCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCE
RIRVIAKDNASLEQFRTLHISATDHTTHKVIATAFENIFINLEIAGLSQITLPDERHLRL
EEEEEECCCCCCCCEEEEEEEECCCCHHHHHHHHHCEEEEEEEEECCEEECCCCCCCEEE
CSPTSTTAVIRFLSNSLNLSPLEFADTVIDSAFDIYGSWILNTAQASHKLGNPWNCFVAR
ECCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEE
FTNFNQIVDQLRKGYPVVVSVKGPLKGSALPYESGHLLVVKGYDSKKQEVFCIDPAFSTN
CCCHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCEEEEECCCCCCC
ELTHVTYALDDFLVAWGRRKGIAYVFDQ
CCEEEEHHHHHHHHHHCCCCCEEEEECC
>Mature Secondary Structure
MKNIFFWSILMILLTSSVYTNELMHRSLLVTEKKQDIFVWEEMLLNSFDELIVSWDAKRP
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHEECCCCCC
VEGSYLIQVSLFIKEWSPWLDYAFWGAHDQYTFKKKLSKANLQVCQNIVEVLKGNKANGF
CCCCEEEEEEEEEECCCHHHCEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCE
RIRVIAKDNASLEQFRTLHISATDHTTHKVIATAFENIFINLEIAGLSQITLPDERHLRL
EEEEEECCCCCCCCEEEEEEEECCCCHHHHHHHHHCEEEEEEEEECCEEECCCCCCCEEE
CSPTSTTAVIRFLSNSLNLSPLEFADTVIDSAFDIYGSWILNTAQASHKLGNPWNCFVAR
ECCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEE
FTNFNQIVDQLRKGYPVVVSVKGPLKGSALPYESGHLLVVKGYDSKKQEVFCIDPAFSTN
CCCHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCEEEEECCCCCCC
ELTHVTYALDDFLVAWGRRKGIAYVFDQ
CCEEEEHHHHHHHHHHCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA