Definition Candidatus Protochlamydia amoebophila UWE25, complete genome.
Accession NC_005861
Length 2,414,465

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The map label for this gene is 46445896

Identifier: 46445896

GI number: 46445896

Start: 369607

End: 371316

Strand: Direct

Name: 46445896

Synonym: pc0262

Alternate gene names: NA

Gene position: 369607-371316 (Clockwise)

Preceding gene: 46445895

Following gene: 46445897

Centisome position: 15.31

GC content: 37.78

Gene sequence:

>1710_bases
TTGGCATTTGCGATAGCAGGTTATAGTTCATTTTGGCTGATTTTAGCTGTTTGTGTGTTAATTGCTTTTGTAGGAATTAA
CTATATTACGATTTGTAAATTTAGCCCCACAGGAGGGGGAGTTTATGCTTCAGCGAGAAGGAAATCGGAAGTATTGGCTC
TAATAGGAGCTTTTTTTTTAATTGCTGATTATCTCATTACTGCAGGACTAAGTTCTTTATCCTGTTTTGAATACCTGGGT
GTAGAGCATCCCGCTTATTGGGCAATCGGCTCTATTGTATGCATTGGAGCTTTTAATTTTTTTGGGCCGCGCCATACAGG
TAATCTTGCCTTAGGAATTGCTGTTTTTACTTTTATAACAGTTCTTATTTTAGCCCTTTTGTCTCTCCCTTTTTTGAAAG
ATGCGATTGATTCTATCAAACCTCTTGAAGGGGGGATTCTCAAAAACTGGAATAGCTTTGTGGGAATTATTGTTGCATTA
TCGGGTGTAGAGGCCATCGCTAATACAACAGGTGTGATGAAGCTTGATTTAGGCAGTACAGATGCTCATCCTTCAGTCCA
TCAGACATCTAAAAAAGCTATTTTATGGGTCATGATCGAAGTTTGTCTTTTTACAGGCCTATTTGGCCTTGCCATGAATG
CAATTCCACATTTACAGTTTATTGATGGTCATATTGTGACACCTGATGGAACCAATATTCGTGATGCGATGCTTCGTTAT
ATGGGAAATTATTTTGTAACGAATCAATGGGGATCTGAATCGATTGGTTATTTTGTTGGTTATGCTATTAGCTTAGCTTT
TGCCATTTTGCTCCTTTCCGCGGTTAATACAGCTATTAATGCACTGATTTCATTAATGTTTGTGATGTCTCGTGATGGAG
AAATGCCTGCTGTATTTCAAAAACTTAATGCCTTTGGAGTTCCTATTGTTCCACTCTTAATTGCAACAGGTGCTGCTTCG
TTTGTTCTTATTTTTGTACATGATGTTGCTGCTTTAGCGGATCTTTATGCTGTGGGATTTGTAGGAGCCATTGCGACTAA
TTTAGGCGTTAATGCTTATGATTCCACAATTCCCATGAGTAAATGGGAGAGAAGTTTCATGTCGTTAACATTTTTTGTGA
TGATTATCATTGAAATCACTCTTTTGATAGATAAACCTAACGCTCGCTTTTTTGCGATTTATATCATGGCTGTTGGTTTA
GTGTTACGCGCATTGGTGATTGAACATCGGCAAAAACAGTGGGCATCAAAAAAGGTGACCCTAAAGCATGCTTCACTATA
CACTGATGATACGCGAGCTTCTTTACATCATGGAGCAATTTTATGCGCTGTTAGAACTATAGGCAAAACGTTAAATTTTT
CTCTTCAAGAAGCCAAAAAACAGGGGCAACCTCTTTATATCTTGTTTATTAGGGAACAAAAAATTGTGACAGATGAAGAT
AAAAATCGGACTTGGCTTGATGATCATGAGGCTTGCCGAATTTTTGATTATGCAAAAGAAAGCTCTCATGAAATGACAAT
TAAATTTTTTTATGTTGTGAGTGCTTCACCTGTTAACTCAATTGTCGATATGGCCGAAAAACTGCAAGTGTCTAGAATTA
TTTTAGGTAGGCCGCGACACAGTACGTTGCTACAGATGCTCAGAGGTAATATTGTGCAAGAAGTTTCTGAAGTTCTTACC
CCCAATATTGACCTTTTAGTTATCTCTTAA

Upstream 100 bases:

>100_bases
GCAAACATCAATTACTAAAAGACCTCGCAACGTTGGCCCCTTTCAAGCAGCAGCTCTCTTATATGGAGACTGGGGAACAA
GTAAAGCTTATGTCATTGGA

Downstream 100 bases:

>100_bases
AGTTTCGATATTCATTTAAATAAGTATTTTTTGTAAAATCCATTTTTAGATAGTTAATCCTAGAATTTGATTCTTCTCAA
GAAACTCTATACAATTAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 569; Mature: 568

Protein sequence:

>569_residues
MAFAIAGYSSFWLILAVCVLIAFVGINYITICKFSPTGGGVYASARRKSEVLALIGAFFLIADYLITAGLSSLSCFEYLG
VEHPAYWAIGSIVCIGAFNFFGPRHTGNLALGIAVFTFITVLILALLSLPFLKDAIDSIKPLEGGILKNWNSFVGIIVAL
SGVEAIANTTGVMKLDLGSTDAHPSVHQTSKKAILWVMIEVCLFTGLFGLAMNAIPHLQFIDGHIVTPDGTNIRDAMLRY
MGNYFVTNQWGSESIGYFVGYAISLAFAILLLSAVNTAINALISLMFVMSRDGEMPAVFQKLNAFGVPIVPLLIATGAAS
FVLIFVHDVAALADLYAVGFVGAIATNLGVNAYDSTIPMSKWERSFMSLTFFVMIIIEITLLIDKPNARFFAIYIMAVGL
VLRALVIEHRQKQWASKKVTLKHASLYTDDTRASLHHGAILCAVRTIGKTLNFSLQEAKKQGQPLYILFIREQKIVTDED
KNRTWLDDHEACRIFDYAKESSHEMTIKFFYVVSASPVNSIVDMAEKLQVSRIILGRPRHSTLLQMLRGNIVQEVSEVLT
PNIDLLVIS

Sequences:

>Translated_569_residues
MAFAIAGYSSFWLILAVCVLIAFVGINYITICKFSPTGGGVYASARRKSEVLALIGAFFLIADYLITAGLSSLSCFEYLG
VEHPAYWAIGSIVCIGAFNFFGPRHTGNLALGIAVFTFITVLILALLSLPFLKDAIDSIKPLEGGILKNWNSFVGIIVAL
SGVEAIANTTGVMKLDLGSTDAHPSVHQTSKKAILWVMIEVCLFTGLFGLAMNAIPHLQFIDGHIVTPDGTNIRDAMLRY
MGNYFVTNQWGSESIGYFVGYAISLAFAILLLSAVNTAINALISLMFVMSRDGEMPAVFQKLNAFGVPIVPLLIATGAAS
FVLIFVHDVAALADLYAVGFVGAIATNLGVNAYDSTIPMSKWERSFMSLTFFVMIIIEITLLIDKPNARFFAIYIMAVGL
VLRALVIEHRQKQWASKKVTLKHASLYTDDTRASLHHGAILCAVRTIGKTLNFSLQEAKKQGQPLYILFIREQKIVTDED
KNRTWLDDHEACRIFDYAKESSHEMTIKFFYVVSASPVNSIVDMAEKLQVSRIILGRPRHSTLLQMLRGNIVQEVSEVLT
PNIDLLVIS
>Mature_568_residues
AFAIAGYSSFWLILAVCVLIAFVGINYITICKFSPTGGGVYASARRKSEVLALIGAFFLIADYLITAGLSSLSCFEYLGV
EHPAYWAIGSIVCIGAFNFFGPRHTGNLALGIAVFTFITVLILALLSLPFLKDAIDSIKPLEGGILKNWNSFVGIIVALS
GVEAIANTTGVMKLDLGSTDAHPSVHQTSKKAILWVMIEVCLFTGLFGLAMNAIPHLQFIDGHIVTPDGTNIRDAMLRYM
GNYFVTNQWGSESIGYFVGYAISLAFAILLLSAVNTAINALISLMFVMSRDGEMPAVFQKLNAFGVPIVPLLIATGAASF
VLIFVHDVAALADLYAVGFVGAIATNLGVNAYDSTIPMSKWERSFMSLTFFVMIIIEITLLIDKPNARFFAIYIMAVGLV
LRALVIEHRQKQWASKKVTLKHASLYTDDTRASLHHGAILCAVRTIGKTLNFSLQEAKKQGQPLYILFIREQKIVTDEDK
NRTWLDDHEACRIFDYAKESSHEMTIKFFYVVSASPVNSIVDMAEKLQVSRIILGRPRHSTLLQMLRGNIVQEVSEVLTP
NIDLLVIS

Specific function: Unknown

COG id: COG0531

COG function: function code E; Amino acid transporters

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 62407; Mature: 62276

Theoretical pI: Translated: 7.62; Mature: 7.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAFAIAGYSSFWLILAVCVLIAFVGINYITICKFSPTGGGVYASARRKSEVLALIGAFFL
CEEEECCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCEEEHHHHHHHHHHHHHHHHH
IADYLITAGLSSLSCFEYLGVEHPAYWAIGSIVCIGAFNFFGPRHTGNLALGIAVFTFIT
HHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
VLILALLSLPFLKDAIDSIKPLEGGILKNWNSFVGIIVALSGVEAIANTTGVMKLDLGST
HHHHHHHHCHHHHHHHHHCCCCCCCHHHCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCC
DAHPSVHQTSKKAILWVMIEVCLFTGLFGLAMNAIPHLQFIDGHIVTPDGTNIRDAMLRY
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCEEECCCCCCHHHHHHHH
MGNYFVTNQWGSESIGYFVGYAISLAFAILLLSAVNTAINALISLMFVMSRDGEMPAVFQ
HCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
KLNAFGVPIVPLLIATGAASFVLIFVHDVAALADLYAVGFVGAIATNLGVNAYDSTIPMS
HHHHCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHH
KWERSFMSLTFFVMIIIEITLLIDKPNARFFAIYIMAVGLVLRALVIEHRQKQWASKKVT
HHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE
LKHASLYTDDTRASLHHGAILCAVRTIGKTLNFSLQEAKKQGQPLYILFIREQKIVTDED
EEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCEEEEEEECCCEECCCC
KNRTWLDDHEACRIFDYAKESSHEMTIKFFYVVSASPVNSIVDMAEKLQVSRIILGRPRH
CCCCCCCCCCHHHHHHHHHCCCCEEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCH
STLLQMLRGNIVQEVSEVLTPNIDLLVIS
HHHHHHHHHHHHHHHHHHHCCCCCEEEEC
>Mature Secondary Structure 
AFAIAGYSSFWLILAVCVLIAFVGINYITICKFSPTGGGVYASARRKSEVLALIGAFFL
EEEECCHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCEEEHHHHHHHHHHHHHHHHH
IADYLITAGLSSLSCFEYLGVEHPAYWAIGSIVCIGAFNFFGPRHTGNLALGIAVFTFIT
HHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHH
VLILALLSLPFLKDAIDSIKPLEGGILKNWNSFVGIIVALSGVEAIANTTGVMKLDLGST
HHHHHHHHCHHHHHHHHHCCCCCCCHHHCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCC
DAHPSVHQTSKKAILWVMIEVCLFTGLFGLAMNAIPHLQFIDGHIVTPDGTNIRDAMLRY
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCEEECCCCCCHHHHHHHH
MGNYFVTNQWGSESIGYFVGYAISLAFAILLLSAVNTAINALISLMFVMSRDGEMPAVFQ
HCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHH
KLNAFGVPIVPLLIATGAASFVLIFVHDVAALADLYAVGFVGAIATNLGVNAYDSTIPMS
HHHHCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHH
KWERSFMSLTFFVMIIIEITLLIDKPNARFFAIYIMAVGLVLRALVIEHRQKQWASKKVT
HHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE
LKHASLYTDDTRASLHHGAILCAVRTIGKTLNFSLQEAKKQGQPLYILFIREQKIVTDED
EEEEEEECCCHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCCCEEEEEEECCCEECCCC
KNRTWLDDHEACRIFDYAKESSHEMTIKFFYVVSASPVNSIVDMAEKLQVSRIILGRPRH
CCCCCCCCCCHHHHHHHHHCCCCEEEEEEEEEEECCHHHHHHHHHHHHHHHHHHHCCCCH
STLLQMLRGNIVQEVSEVLTPNIDLLVIS
HHHHHHHHHHHHHHHHHHHCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA