| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is yaeL [C]
Identifier: 46445895
GI number: 46445895
Start: 367144
End: 369105
Strand: Direct
Name: yaeL [C]
Synonym: pc0261
Alternate gene names: 46445895
Gene position: 367144-369105 (Clockwise)
Preceding gene: 46445894
Following gene: 46445896
Centisome position: 15.21
GC content: 35.22
Gene sequence:
>1962_bases ATGGTTGTCAGTATTCTTTATGTGATCTTAGCTATTCTAGGCTTAAGCTTTTTGATTTTTATCCATGAATTAGGCCATTA CTATATGGCTCGTCGATTGGGAATGAAAGTAGAGACTTTTTCGATTGGCTTCGGAAGACCTATTTATTCGTGGGAAAGAG ATGGTGTCAAATGGCAAGTTGGTTGGTTGTTATTTGGAGGTTATGTCAAAATTGCTGGCATGGATATCTCTGATCAAAAA GACCTTTATGACATCCAAGATGGTTTTTTTGGAAAAAGCCCATGGGATAGAATTAAAGTAGCTTTTATGGGCCCTTTCGT GAACATCGTATTTGCATTGTTAGCCTTTAGTGCTCTTTGGTTGGCCGGTGGGCGTGAGAAAAAATTTAGTGAATATACTA GTAAAATTGGTTGGATAGATCCGAAATCTGAATTATATGTAAAAGGAGTTCGACCTGGTGATGAAATTACAAGTTACAAC GGACAAATTTTTCAAGGCTCAAAAGACCATTTGTCAGCCCCAATGACTTCAACGAGTGATATTGAAATAGCTGGTAATTA TGTCAATTTTATGACAAAAGAAAAAACTCCTTTTCGTTATACTGTCAAAACATATCCTCATCCTAGTGCTCTTGAAAAAG ACATTTTGACAGCCGGAATTTTGAATTCTGCTAATTATGTTGTGTATGATCGTTTCTCTAATGGGGAAGAAAATCCATTG CCAGAAGGGTCTCCTATGAAATATAGCGGAATTGAATATGGCGATCGAATTGTTTGGATAGATGGCTTACCAGTTTATTC CCTTCAACAACTTTCTCATATTTTAAATGATTCTAAGGCATTGGTGACTATCCAACGCGGACAAGAAACACTTTTGCGTC GTATCCCTAGAATTCGTGTGGAAGAACTTAAGCTGGATTCAGAAGTAAGGGAAGAATTGATCGATTGGCAATTTGAAGCA GAATTAAACGGAACAAAAATTCAAAAATTATTTACGATTCCTTACAACCTTAACAATGAATGTGTAGTGGAAGGTTTTGT GAAATTTATCGATAAGGAAAAAGAGTTAGAGGCATTTCCTTCTAATCCGTTTTCAATTTTGGAAACTCCTTTAGAAGTAG GGGATATTATTTTAGCTGTAGATGGTATTCAAGTGAGCTATTCATTTGAAATTTTATCTCGACTACAACAAAAACGAGTC AACGTGATTGTCGAGCGTTCGAAACAGCCTACTTTAGTTCCTTCATGGAAATTAGCTGATCAGCTTTTTGATGAAGAATT TAACCCAAACGATTTAGAAAAACTTGTTTCTCAAATAGGTTTAACAAATGAACCTAAATCTATCGGAAACCTTTATTTAC TCGACCCAATTGTACCAAAAATGCGAAAGAATTTTGATTTAAATGAAGAAAGTCAAGTCGCATTTATTGCAGAATTAGAA GCGCAACGTAAAGAAATTGAAAGTATTGAAGATCCTGAAAAAAGAGCCCATGCCCGACTTTTACTTGAAAATAGAGATAA TCAACTACTTTTAGGACTACCTGCTGTCAAGGATAAATCAGTTAATTACAACCCTAATCCTTTAGTTTTATTTAACAAGG TATTCGAAGAAATTTGGCATACCCTGAAAGCTTTATTTACAGGATCTTTAAATCCGAAATGGATGAGCGGTCCGATTGGG ATTGTGCAAGTTGTCCACGATCATTCCATGGTTAGTTGGAAAGAAGCAGTATTTTGGTTAGGAGCAATTAGCTTGAATCT AGGCTTTTTAAATCTTTTACCTTTACCAGTATTAGACGGAGGAACTATTTGCTTTGCTCTTTATGAATTGATCACAGGGC GTCGCTTAAAATCTAAAACAATAGAAAAATTGATCATTCCATTTGCCATTTTGTTAATCGGATTTTTTATTTTTCTAACT TATCATGATTTAAGTCGACTTCTTCATACTTTCTTCCATTAG
Upstream 100 bases:
>100_bases TGCTCTTGCTCGGGAAGAGGCTGCAAGGTCTAAACTAATATCAACGAAATAGATATTTTCGATTGATATAACCCGTTTTT AATATAAGGTTTGTATTATT
Downstream 100 bases:
>100_bases AATCTATACGCAAAGGCAAGCCATTAAGGCTTGCCTTTGAATTCACTAAAATCTACTTGCTCTCTTACTTTTTATTCAAA AATTAAGGTTTCTCCAAGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 653; Mature: 653
Protein sequence:
>653_residues MVVSILYVILAILGLSFLIFIHELGHYYMARRLGMKVETFSIGFGRPIYSWERDGVKWQVGWLLFGGYVKIAGMDISDQK DLYDIQDGFFGKSPWDRIKVAFMGPFVNIVFALLAFSALWLAGGREKKFSEYTSKIGWIDPKSELYVKGVRPGDEITSYN GQIFQGSKDHLSAPMTSTSDIEIAGNYVNFMTKEKTPFRYTVKTYPHPSALEKDILTAGILNSANYVVYDRFSNGEENPL PEGSPMKYSGIEYGDRIVWIDGLPVYSLQQLSHILNDSKALVTIQRGQETLLRRIPRIRVEELKLDSEVREELIDWQFEA ELNGTKIQKLFTIPYNLNNECVVEGFVKFIDKEKELEAFPSNPFSILETPLEVGDIILAVDGIQVSYSFEILSRLQQKRV NVIVERSKQPTLVPSWKLADQLFDEEFNPNDLEKLVSQIGLTNEPKSIGNLYLLDPIVPKMRKNFDLNEESQVAFIAELE AQRKEIESIEDPEKRAHARLLLENRDNQLLLGLPAVKDKSVNYNPNPLVLFNKVFEEIWHTLKALFTGSLNPKWMSGPIG IVQVVHDHSMVSWKEAVFWLGAISLNLGFLNLLPLPVLDGGTICFALYELITGRRLKSKTIEKLIIPFAILLIGFFIFLT YHDLSRLLHTFFH
Sequences:
>Translated_653_residues MVVSILYVILAILGLSFLIFIHELGHYYMARRLGMKVETFSIGFGRPIYSWERDGVKWQVGWLLFGGYVKIAGMDISDQK DLYDIQDGFFGKSPWDRIKVAFMGPFVNIVFALLAFSALWLAGGREKKFSEYTSKIGWIDPKSELYVKGVRPGDEITSYN GQIFQGSKDHLSAPMTSTSDIEIAGNYVNFMTKEKTPFRYTVKTYPHPSALEKDILTAGILNSANYVVYDRFSNGEENPL PEGSPMKYSGIEYGDRIVWIDGLPVYSLQQLSHILNDSKALVTIQRGQETLLRRIPRIRVEELKLDSEVREELIDWQFEA ELNGTKIQKLFTIPYNLNNECVVEGFVKFIDKEKELEAFPSNPFSILETPLEVGDIILAVDGIQVSYSFEILSRLQQKRV NVIVERSKQPTLVPSWKLADQLFDEEFNPNDLEKLVSQIGLTNEPKSIGNLYLLDPIVPKMRKNFDLNEESQVAFIAELE AQRKEIESIEDPEKRAHARLLLENRDNQLLLGLPAVKDKSVNYNPNPLVLFNKVFEEIWHTLKALFTGSLNPKWMSGPIG IVQVVHDHSMVSWKEAVFWLGAISLNLGFLNLLPLPVLDGGTICFALYELITGRRLKSKTIEKLIIPFAILLIGFFIFLT YHDLSRLLHTFFH >Mature_653_residues MVVSILYVILAILGLSFLIFIHELGHYYMARRLGMKVETFSIGFGRPIYSWERDGVKWQVGWLLFGGYVKIAGMDISDQK DLYDIQDGFFGKSPWDRIKVAFMGPFVNIVFALLAFSALWLAGGREKKFSEYTSKIGWIDPKSELYVKGVRPGDEITSYN GQIFQGSKDHLSAPMTSTSDIEIAGNYVNFMTKEKTPFRYTVKTYPHPSALEKDILTAGILNSANYVVYDRFSNGEENPL PEGSPMKYSGIEYGDRIVWIDGLPVYSLQQLSHILNDSKALVTIQRGQETLLRRIPRIRVEELKLDSEVREELIDWQFEA ELNGTKIQKLFTIPYNLNNECVVEGFVKFIDKEKELEAFPSNPFSILETPLEVGDIILAVDGIQVSYSFEILSRLQQKRV NVIVERSKQPTLVPSWKLADQLFDEEFNPNDLEKLVSQIGLTNEPKSIGNLYLLDPIVPKMRKNFDLNEESQVAFIAELE AQRKEIESIEDPEKRAHARLLLENRDNQLLLGLPAVKDKSVNYNPNPLVLFNKVFEEIWHTLKALFTGSLNPKWMSGPIG IVQVVHDHSMVSWKEAVFWLGAISLNLGFLNLLPLPVLDGGTICFALYELITGRRLKSKTIEKLIIPFAILLIGFFIFLT YHDLSRLLHTFFH
Specific function: Unknown
COG id: COG0750
COG function: function code M; Predicted membrane-associated Zn-dependent proteases 1
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M50B family [H]
Homologues:
Organism=Escherichia coli, GI1786373, Length=294, Percent_Identity=25.5102040816327, Blast_Score=76, Evalue=6e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008915 [H]
Pfam domain/function: PF02163 Peptidase_M50 [H]
EC number: NA
Molecular weight: Translated: 74537; Mature: 74537
Theoretical pI: Translated: 5.71; Mature: 5.71
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVVSILYVILAILGLSFLIFIHELGHYYMARRLGMKVETFSIGFGRPIYSWERDGVKWQV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCCEEEE GWLLFGGYVKIAGMDISDQKDLYDIQDGFFGKSPWDRIKVAFMGPFVNIVFALLAFSALW EEEEECCEEEEEECCCCCCCCHHHHHCCCCCCCCHHHEEEEEECHHHHHHHHHHHHHHHH LAGGREKKFSEYTSKIGWIDPKSELYVKGVRPGDEITSYNGQIFQGSKDHLSAPMTSTSD HCCCCCHHHHHHHHHCCCCCCCCCEEEECCCCCHHHHCCCCEEECCCHHHCCCCCCCCCC IEIAGNYVNFMTKEKTPFRYTVKTYPHPSALEKDILTAGILNSANYVVYDRFSNGEENPL EEEECCHHHHEECCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCC PEGSPMKYSGIEYGDRIVWIDGLPVYSLQQLSHILNDSKALVTIQRGQETLLRRIPRIRV CCCCCCEECCCCCCCEEEEECCCCHHHHHHHHHHHCCCCEEEEEECCHHHHHHHCCCCCH EELKLDSEVREELIDWQFEAELNGTKIQKLFTIPYNLNNECVVEGFVKFIDKEKELEAFP HHHHCCHHHHHHHHCEEEEECCCCCEEEEEEEECCCCCCHHHHHHHHHHHCCCHHHHCCC SNPFSILETPLEVGDIILAVDGIQVSYSFEILSRLQQKRVNVIVERSKQPTLVPSWKLAD CCCHHHHHCCHHHCCEEEEECCEEEEEHHHHHHHHHHHHHHHHEECCCCCCCCCCHHHHH QLFDEEFNPNDLEKLVSQIGLTNEPKSIGNLYLLDPIVPKMRKNFDLNEESQVAFIAELE HHHCCCCCHHHHHHHHHHCCCCCCCHHHCCEEEECCHHHHHHCCCCCCCCCCEEHHHHHH AQRKEIESIEDPEKRAHARLLLENRDNQLLLGLPAVKDKSVNYNPNPLVLFNKVFEEIWH HHHHHHHCCCCHHHHHHHHHHEECCCCEEEEECCCCCCCCCCCCCCCEEEHHHHHHHHHH TLKALFTGSLNPKWMSGPIGIVQVVHDHSMVSWKEAVFWLGAISLNLGFLNLLPLPVLDG HHHHHHCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCC GTICFALYELITGRRLKSKTIEKLIIPFAILLIGFFIFLTYHDLSRLLHTFFH CHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MVVSILYVILAILGLSFLIFIHELGHYYMARRLGMKVETFSIGFGRPIYSWERDGVKWQV CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCCCCCEEEE GWLLFGGYVKIAGMDISDQKDLYDIQDGFFGKSPWDRIKVAFMGPFVNIVFALLAFSALW EEEEECCEEEEEECCCCCCCCHHHHHCCCCCCCCHHHEEEEEECHHHHHHHHHHHHHHHH LAGGREKKFSEYTSKIGWIDPKSELYVKGVRPGDEITSYNGQIFQGSKDHLSAPMTSTSD HCCCCCHHHHHHHHHCCCCCCCCCEEEECCCCCHHHHCCCCEEECCCHHHCCCCCCCCCC IEIAGNYVNFMTKEKTPFRYTVKTYPHPSALEKDILTAGILNSANYVVYDRFSNGEENPL EEEECCHHHHEECCCCCEEEEEECCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCC PEGSPMKYSGIEYGDRIVWIDGLPVYSLQQLSHILNDSKALVTIQRGQETLLRRIPRIRV CCCCCCEECCCCCCCEEEEECCCCHHHHHHHHHHHCCCCEEEEEECCHHHHHHHCCCCCH EELKLDSEVREELIDWQFEAELNGTKIQKLFTIPYNLNNECVVEGFVKFIDKEKELEAFP HHHHCCHHHHHHHHCEEEEECCCCCEEEEEEEECCCCCCHHHHHHHHHHHCCCHHHHCCC SNPFSILETPLEVGDIILAVDGIQVSYSFEILSRLQQKRVNVIVERSKQPTLVPSWKLAD CCCHHHHHCCHHHCCEEEEECCEEEEEHHHHHHHHHHHHHHHHEECCCCCCCCCCHHHHH QLFDEEFNPNDLEKLVSQIGLTNEPKSIGNLYLLDPIVPKMRKNFDLNEESQVAFIAELE HHHCCCCCHHHHHHHHHHCCCCCCCHHHCCEEEECCHHHHHHCCCCCCCCCCEEHHHHHH AQRKEIESIEDPEKRAHARLLLENRDNQLLLGLPAVKDKSVNYNPNPLVLFNKVFEEIWH HHHHHHHCCCCHHHHHHHHHHEECCCCEEEEECCCCCCCCCCCCCCCEEEHHHHHHHHHH TLKALFTGSLNPKWMSGPIGIVQVVHDHSMVSWKEAVFWLGAISLNLGFLNLLPLPVLDG HHHHHHCCCCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCHHHHCCCCCCCC GTICFALYELITGRRLKSKTIEKLIIPFAILLIGFFIFLTYHDLSRLLHTFFH CHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10684935 [H]