| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46445867
Identifier: 46445867
GI number: 46445867
Start: 331122
End: 331856
Strand: Direct
Name: 46445867
Synonym: pc0233
Alternate gene names: NA
Gene position: 331122-331856 (Clockwise)
Preceding gene: 46445866
Following gene: 46445868
Centisome position: 13.71
GC content: 33.33
Gene sequence:
>735_bases ATGACAAAAGTTGTTATAACTGATGAACAAAAAAAAATGTTAGAACAATTTCTCGATGAAAATCGCCCAGCTGAATTAAT CAATACCTATCTGCATTTTATTGAGAGCAAATTCCAACTACAACCCGTACTTTTTCCTAAAGATAAAATTATCTATCAAA GTGCGGAAGATTGTATCAAAAACCTAGAAAGGGAAGGAAAACTTTGGCATGAAACAGAAATTAAAATTGGTTTTGGTCAT GCAAGTGTTAATGAGGAAACTAAAAAAGTTTACATTTGCCCATTCACGGGAAAAGTATTTGGAGATAACACGCATCCAAA CCCTCAAGATGCTATTTACGATTGGGTATCTAAATGTCCAGAAAATACTGAAAGGATTGGCGGTTTGAGAGTCAAACGTT TCTTTGTTTCAGAAGATCCAGAGGTCATCAAAAGTTATATCGATAAAACTAAATCACGCAGAGATGCCATTAAGAAAGTT GTTTACTCTTCGGTTTTAAGTGGGAAACTCTTCAATAGTAAAGAAGCTGTGATCGAAGACTTTAAACGAAATTATTTGAA AAAATTGTCTTTAGTCGAAGTACAAATTCAAAATAAATTTAAAATTGAGGATCACTTTTTGGCCTTTATTCAAAAACATT TAGTAGAAGATAAAATCGCATCATTTGTGGAAGCATTAGCGGAGTTTGATGAATTTCTGCCATACGTTGAGCGTTGGGTA GAAGCAGAAGATTAA
Upstream 100 bases:
>100_bases TCTAAAATTAGGCTTAAAACCGATTTTTTAAAACCAATAAAGAAAAGAATAGTTCGCTCAAAAGTATAATTTTAATCTTA AATTTCCGGTAGAGGTTTTC
Downstream 100 bases:
>100_bases TGCAATGAATTGTTTGCTTAATTTGATTTGTGATGCTCTATGTCTACATTAATACACTATTATTCAAATTCTGCTGAAGA AACACAAGAAGTTGGATTTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 244; Mature: 243
Protein sequence:
>244_residues MTKVVITDEQKKMLEQFLDENRPAELINTYLHFIESKFQLQPVLFPKDKIIYQSAEDCIKNLEREGKLWHETEIKIGFGH ASVNEETKKVYICPFTGKVFGDNTHPNPQDAIYDWVSKCPENTERIGGLRVKRFFVSEDPEVIKSYIDKTKSRRDAIKKV VYSSVLSGKLFNSKEAVIEDFKRNYLKKLSLVEVQIQNKFKIEDHFLAFIQKHLVEDKIASFVEALAEFDEFLPYVERWV EAED
Sequences:
>Translated_244_residues MTKVVITDEQKKMLEQFLDENRPAELINTYLHFIESKFQLQPVLFPKDKIIYQSAEDCIKNLEREGKLWHETEIKIGFGH ASVNEETKKVYICPFTGKVFGDNTHPNPQDAIYDWVSKCPENTERIGGLRVKRFFVSEDPEVIKSYIDKTKSRRDAIKKV VYSSVLSGKLFNSKEAVIEDFKRNYLKKLSLVEVQIQNKFKIEDHFLAFIQKHLVEDKIASFVEALAEFDEFLPYVERWV EAED >Mature_243_residues TKVVITDEQKKMLEQFLDENRPAELINTYLHFIESKFQLQPVLFPKDKIIYQSAEDCIKNLEREGKLWHETEIKIGFGHA SVNEETKKVYICPFTGKVFGDNTHPNPQDAIYDWVSKCPENTERIGGLRVKRFFVSEDPEVIKSYIDKTKSRRDAIKKVV YSSVLSGKLFNSKEAVIEDFKRNYLKKLSLVEVQIQNKFKIEDHFLAFIQKHLVEDKIASFVEALAEFDEFLPYVERWVE AED
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the chlamydial CPn_0658/CT_538/TC_0825 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28604; Mature: 28473
Theoretical pI: Translated: 6.00; Mature: 6.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKVVITDEQKKMLEQFLDENRPAELINTYLHFIESKFQLQPVLFPKDKIIYQSAEDCIK CCEEEEECHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH NLEREGKLWHETEIKIGFGHASVNEETKKVYICPFTGKVFGDNTHPNPQDAIYDWVSKCP HHHHCCCCEEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCC ENTERIGGLRVKRFFVSEDPEVIKSYIDKTKSRRDAIKKVVYSSVLSGKLFNSKEAVIED CCHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHCCCHHHHHHH FKRNYLKKLSLVEVQIQNKFKIEDHFLAFIQKHLVEDKIASFVEALAEFDEFLPYVERWV HHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EAED CCCC >Mature Secondary Structure TKVVITDEQKKMLEQFLDENRPAELINTYLHFIESKFQLQPVLFPKDKIIYQSAEDCIK CEEEEECHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHH NLEREGKLWHETEIKIGFGHASVNEETKKVYICPFTGKVFGDNTHPNPQDAIYDWVSKCP HHHHCCCCEEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHCC ENTERIGGLRVKRFFVSEDPEVIKSYIDKTKSRRDAIKKVVYSSVLSGKLFNSKEAVIED CCHHHHCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHCCCHHHHHHH FKRNYLKKLSLVEVQIQNKFKIEDHFLAFIQKHLVEDKIASFVEALAEFDEFLPYVERWV HHHHHHHHHHHHHEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EAED CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9784136 [H]