| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is yjeE [C]
Identifier: 46445868
GI number: 46445868
Start: 331896
End: 332336
Strand: Direct
Name: yjeE [C]
Synonym: pc0234
Alternate gene names: 46445868
Gene position: 331896-332336 (Clockwise)
Preceding gene: 46445867
Following gene: 46445869
Centisome position: 13.75
GC content: 34.47
Gene sequence:
>441_bases ATGTCTACATTAATACACTATTATTCAAATTCTGCTGAAGAAACACAAGAAGTTGGATTTAATTTTGGTTTAACATTGCC CGCCAACTCTGTCATCTGTTTTTTTGGTGATCTAGCTGCTGGCAAAACAACTTTTATTAAAGGTTTGGTTGCAGGAGCAT CTCAACTTGATCCAAATATTGTGCAAAGTCCAACTTTTTCTTATCTTCACATTTATGAGGGAAAGCAAATTGTTTACCAC TTTGATTTATATCGCTTGAAAGATGTAGATGAGTTTCTGAGCATGGGATTTGATGAATATTTTGAATCTGGCGGAATTTG TTGTGTGGAATGGTCTGAACGAATTCATTCGATACTCCCTCCTAATTGCTTATTTGTGATATTAACTCATCAAACAGAGA ACCGCAGAGAAATTAAGATTATTGAGAAGGATACAAAATGA
Upstream 100 bases:
>100_bases ATTAGCGGAGTTTGATGAATTTCTGCCATACGTTGAGCGTTGGGTAGAAGCAGAAGATTAATGCAATGAATTGTTTGCTT AATTTGATTTGTGATGCTCT
Downstream 100 bases:
>100_bases AAAAGGCGGTTCAGGCTAAGTTTATTAAAACTGCTATTTTGAATAAAGATTATCCTATAATCCGTTCTCCGTCTGGTGAT ATTCTTCCCGAAGTCGCAGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 146; Mature: 145
Protein sequence:
>146_residues MSTLIHYYSNSAEETQEVGFNFGLTLPANSVICFFGDLAAGKTTFIKGLVAGASQLDPNIVQSPTFSYLHIYEGKQIVYH FDLYRLKDVDEFLSMGFDEYFESGGICCVEWSERIHSILPPNCLFVILTHQTENRREIKIIEKDTK
Sequences:
>Translated_146_residues MSTLIHYYSNSAEETQEVGFNFGLTLPANSVICFFGDLAAGKTTFIKGLVAGASQLDPNIVQSPTFSYLHIYEGKQIVYH FDLYRLKDVDEFLSMGFDEYFESGGICCVEWSERIHSILPPNCLFVILTHQTENRREIKIIEKDTK >Mature_145_residues STLIHYYSNSAEETQEVGFNFGLTLPANSVICFFGDLAAGKTTFIKGLVAGASQLDPNIVQSPTFSYLHIYEGKQIVYHF DLYRLKDVDEFLSMGFDEYFESGGICCVEWSERIHSILPPNCLFVILTHQTENRREIKIIEKDTK
Specific function: Unknown
COG id: COG0802
COG function: function code R; Predicted ATPase or kinase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0079 family [H]
Homologues:
Organism=Escherichia coli, GI1790610, Length=124, Percent_Identity=34.6774193548387, Blast_Score=79, Evalue=1e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003442 [H]
Pfam domain/function: PF02367 UPF0079 [H]
EC number: NA
Molecular weight: Translated: 16614; Mature: 16483
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTLIHYYSNSAEETQEVGFNFGLTLPANSVICFFGDLAAGKTTFIKGLVAGASQLDPNI CCCEEEECCCCHHHHHHCCCCCEEECCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCC VQSPTFSYLHIYEGKQIVYHFDLYRLKDVDEFLSMGFDEYFESGGICCVEWSERIHSILP CCCCCCEEEEEECCCEEEEEECCHHHCCHHHHHHCCHHHHHHCCCEEEEEHHHHHHHHCC PNCLFVILTHQTENRREIKIIEKDTK CCEEEEEEECCCCCCEEEEEEECCCC >Mature Secondary Structure STLIHYYSNSAEETQEVGFNFGLTLPANSVICFFGDLAAGKTTFIKGLVAGASQLDPNI CCEEEECCCCHHHHHHCCCCCEEECCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCCCC VQSPTFSYLHIYEGKQIVYHFDLYRLKDVDEFLSMGFDEYFESGGICCVEWSERIHSILP CCCCCCEEEEEECCCEEEEEECCHHHCCHHHHHHCCHHHHHHCCCEEEEEHHHHHHHHCC PNCLFVILTHQTENRREIKIIEKDTK CCEEEEEEECCCCCCEEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP [C]
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9665876 [H]