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The map label for this gene is yodO [C]

Identifier: 46445864

GI number: 46445864

Start: 326571

End: 327614

Strand: Direct

Name: yodO [C]

Synonym: pc0230

Alternate gene names: 46445864

Gene position: 326571-327614 (Clockwise)

Preceding gene: 46445863

Following gene: 46445866

Centisome position: 13.53

GC content: 34.48

Gene sequence:

>1044_bases
ATGATTAGTGTAAAAACAACTTTTAACTTGATTGCTTCAAAATCCCAATGCTTTATTGACTTGAATTCCCCAGAATCTTG
GCGCCTTATCCAGAGAAAGAATTTCACGAATTTAAAAATTTTAGCAGATTTTTTAGCTTTAAATTTTGAGCAAAGAAAAC
AGCTTTTAGATAAACCTACCTTTGCAATTAATGTTCCTTATCGTCTCGCGCAAAAAATGACAAAAGGGAGTTTAGAAGAT
CCGCTAGTAAAACAATTTTTACCTTTCAAAAGTGAATTTGAAAATCATAATCTCTTTGTTCAAGATCCTGTGGGAGATGA
ACAATGTCGCCGCACAGCTCAATTGTTGCACAAATATCGGGGACGTGTTCTGTTGGTTTGTACAAGTGCTTGTGCTATGC
ATTGTCGTTATTGCTTTAGACAAAATTTTTCCTATCAATCTCATGATAAGACTTTTCTTAAAGAATTAGACCTCATCCGG
CAAGATTCATCCATTCATGAAGTTATTTTAAGCGGCGGGGATCCTCTTTCTTTATCTAATGATATTTTGGCTAAATTATT
CGAAGAGTTAAATGGAATTTCTCATCTTAAGCGAATTCGTTTCCATACACGTTTTCCAATTGGTATTCCAGAAAGAATAG
ATAAAGGATTTTTAAATATCATTGAAAACTGTCCTAAACAGATATTTTTTGTCATTCATTGTAACCACCCTTTAGAATTA
GATGAGGATATCTTTGAGCGTTTGAAGGCTCTTCACCTTAGAGGTTGCGTACTACTTAATCAATCAGTTTTATTAAAAGG
AGTAAATGACCGGATAGAGGTTTTAGAAGAACTCTGCGAGCTCCTTTCTGATCATGGAATTATTCCTTATTATCTTCACC
AATTAGATCGAGTAAAAGGAGCTTCTCATTTTGAATTAGGAGAAAAAGAAGGGGCAGCTTTAATTCAAGAGCTATCCAAA
CGCTTATCTGGATATGCAATACCTCGCTATGTAAGAGAGATTGCTGGAGAAGCTCACAAAACACCTATTCAATTATCATT
TTAG

Upstream 100 bases:

>100_bases
ACGATAATTTAAAATCATTATTTTAGAATTGTTAAATGCTATTTTGTAGCAGTCCTTTTTATTTTGATATTTTTCTTTAA
ACATTTCTTTAACCAATTCT

Downstream 100 bases:

>100_bases
TCATTCAATTCTACATTTTATCAACTGTTGTCAATCCAAGAATGGTTAATCCTTGTTTGAGAACTTTGGCAGTAGCTTCG
CATAAAAGTAGGCGTGTGTT

Product: simlar to L-lysine 2,3-aminomutase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 347; Mature: 347

Protein sequence:

>347_residues
MISVKTTFNLIASKSQCFIDLNSPESWRLIQRKNFTNLKILADFLALNFEQRKQLLDKPTFAINVPYRLAQKMTKGSLED
PLVKQFLPFKSEFENHNLFVQDPVGDEQCRRTAQLLHKYRGRVLLVCTSACAMHCRYCFRQNFSYQSHDKTFLKELDLIR
QDSSIHEVILSGGDPLSLSNDILAKLFEELNGISHLKRIRFHTRFPIGIPERIDKGFLNIIENCPKQIFFVIHCNHPLEL
DEDIFERLKALHLRGCVLLNQSVLLKGVNDRIEVLEELCELLSDHGIIPYYLHQLDRVKGASHFELGEKEGAALIQELSK
RLSGYAIPRYVREIAGEAHKTPIQLSF

Sequences:

>Translated_347_residues
MISVKTTFNLIASKSQCFIDLNSPESWRLIQRKNFTNLKILADFLALNFEQRKQLLDKPTFAINVPYRLAQKMTKGSLED
PLVKQFLPFKSEFENHNLFVQDPVGDEQCRRTAQLLHKYRGRVLLVCTSACAMHCRYCFRQNFSYQSHDKTFLKELDLIR
QDSSIHEVILSGGDPLSLSNDILAKLFEELNGISHLKRIRFHTRFPIGIPERIDKGFLNIIENCPKQIFFVIHCNHPLEL
DEDIFERLKALHLRGCVLLNQSVLLKGVNDRIEVLEELCELLSDHGIIPYYLHQLDRVKGASHFELGEKEGAALIQELSK
RLSGYAIPRYVREIAGEAHKTPIQLSF
>Mature_347_residues
MISVKTTFNLIASKSQCFIDLNSPESWRLIQRKNFTNLKILADFLALNFEQRKQLLDKPTFAINVPYRLAQKMTKGSLED
PLVKQFLPFKSEFENHNLFVQDPVGDEQCRRTAQLLHKYRGRVLLVCTSACAMHCRYCFRQNFSYQSHDKTFLKELDLIR
QDSSIHEVILSGGDPLSLSNDILAKLFEELNGISHLKRIRFHTRFPIGIPERIDKGFLNIIENCPKQIFFVIHCNHPLEL
DEDIFERLKALHLRGCVLLNQSVLLKGVNDRIEVLEELCELLSDHGIIPYYLHQLDRVKGASHFELGEKEGAALIQELSK
RLSGYAIPRYVREIAGEAHKTPIQLSF

Specific function: Unknown

COG id: COG1509

COG function: function code E; Lysine 2,3-aminomutase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the KamA family [H]

Homologues:

Organism=Escherichia coli, GI1790589, Length=347, Percent_Identity=38.0403458213257, Blast_Score=229, Evalue=2e-61,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003739
- InterPro:   IPR022462
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 40089; Mature: 40089

Theoretical pI: Translated: 8.12; Mature: 8.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISVKTTFNLIASKSQCFIDLNSPESWRLIQRKNFTNLKILADFLALNFEQRKQLLDKPT
CEEEHHHHHHHHCCCEEEEECCCCCCHHHHHHCCCCHHHHHHHHHHHCHHHHHHHHCCCC
FAINVPYRLAQKMTKGSLEDPLVKQFLPFKSEFENHNLFVQDPVGDEQCRRTAQLLHKYR
EEEECCHHHHHHHHCCCCCCHHHHHHCCCHHHCCCCCEEEECCCCHHHHHHHHHHHHHHC
GRVLLVCTSACAMHCRYCFRQNFSYQSHDKTFLKELDLIRQDSSIHEVILSGGDPLSLSN
CCEEEEEHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCH
DILAKLFEELNGISHLKRIRFHTRFPIGIPERIDKGFLNIIENCPKQIFFVIHCNHPLEL
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCHHHEEEEEECCCCCCC
DEDIFERLKALHLRGCVLLNQSVLLKGVNDRIEVLEELCELLSDHGIIPYYLHQLDRVKG
CHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCC
ASHFELGEKEGAALIQELSKRLSGYAIPRYVREIAGEAHKTPIQLSF
CCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHCCCEEECC
>Mature Secondary Structure
MISVKTTFNLIASKSQCFIDLNSPESWRLIQRKNFTNLKILADFLALNFEQRKQLLDKPT
CEEEHHHHHHHHCCCEEEEECCCCCCHHHHHHCCCCHHHHHHHHHHHCHHHHHHHHCCCC
FAINVPYRLAQKMTKGSLEDPLVKQFLPFKSEFENHNLFVQDPVGDEQCRRTAQLLHKYR
EEEECCHHHHHHHHCCCCCCHHHHHHCCCHHHCCCCCEEEECCCCHHHHHHHHHHHHHHC
GRVLLVCTSACAMHCRYCFRQNFSYQSHDKTFLKELDLIRQDSSIHEVILSGGDPLSLSN
CCEEEEEHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCH
DILAKLFEELNGISHLKRIRFHTRFPIGIPERIDKGFLNIIENCPKQIFFVIHCNHPLEL
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCHHHEEEEEECCCCCCC
DEDIFERLKALHLRGCVLLNQSVLLKGVNDRIEVLEELCELLSDHGIIPYYLHQLDRVKG
CHHHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCC
ASHFELGEKEGAALIQELSKRLSGYAIPRYVREIAGEAHKTPIQLSF
CCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]