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The map label for this gene is sufD [C]

Identifier: 46445825

GI number: 46445825

Start: 284663

End: 286015

Strand: Direct

Name: sufD [C]

Synonym: pc0191

Alternate gene names: 46445825

Gene position: 284663-286015 (Clockwise)

Preceding gene: 46445824

Following gene: 46445826

Centisome position: 11.79

GC content: 35.55

Gene sequence:

>1353_bases
TTGGCTCGTTCAATCACCGAAAGAGGGGGTTGTCTCATGACATTCGAATTGGGCCTAGAGCAAAAAATCTTTACAAGTTT
ATTGGAAAAGCATTTGGATGCCATTAATCAAGGAGATCCTTTGCAGAAGGCTCGTCAGAAAGCTTGGAGTCAATTTTTAG
AGCGAGGTTTACCAACAAAGCAGTCGGAGGCTTATCGCTATATTAAGCTTAGACATCTATTTTCTCAGAATTATGAATTT
CCTAAAGAAGAGAGCATCACTAAAGATCAAATTGCTTCTTTGGTTTATCCTGAATGCCAACACTCATTTCTCGTTTTTAT
CAATGGTCAGTTTTGTTCCGAATTTTCGGAGACAAAAAATTTACCTTCGCAGGTAATAATTTCTACTTTACAAGAAGCAA
ATCAGACATTTGGAACTTTTTTTAATAATTATTGGTCGAAATCTCTTAAAGAAGAAAATGACTCATTTGCTCTAATCAAT
AGTGCTTTGCATCATCAGGGGGCGTTTATTTATATTCCCCCTAAAACTATTGTCGAAACCCCCATTCAAATTTTGCATTT
GGTGCAAGCGCAAGGTCAATTATTGATGTTGATGCCAAGAATAAATGTCTGTGTTGGAGCTCAGGCAGAAGTTAAATTTG
TTTCTTCTATTCATCAAAAATCCATGAATGGATATTTTATTAATCAAGTCACCGATTTTCTTGTTGAAGATCAAGCATAT
GTTCACTACACGCAAATTTTGAATGAGGAGCACGTTCAGGCATGGCATTTTGAAGCCGTTAGAGCACATCTAAAAAAACA
ATCGACGTTCAAGACAGTGTGTATTACTGAAGGGGGAATGACAGTTCGTAATGATTATCATATTTCTCTCTCTGGAGAAA
ATGCAGAAGTTTTGCTGAATGGAATTTCGATGTTAGAAGATAAAAGAGAAGTACATACACACATTTTTATTGATCATCAA
GCACCAAATTGCCGCTCTTACCAGCTTTTTAAAGCTGTATTAAACGACTTTAGTCGATCAAGTTTTGAAGGAAAAATTAT
GGTTCGACAAAAAGCGCAAAAAACAGAAGCTTTTCAACTGAATAATAATTTGTTATTAAGTGATCATGCCCATGCAGATA
GCAAACCTAATTTAGAAATTTTTGCAGATGATGTAAAAGCTTCTCATGGAGCAACTGTCGGTCAACTGGATGCAGAACAG
CTTTTTTATATGAAAACCCGTGGATTTCCTGAAATGGCTGCTAAAAATTTATTAATTTATGGTTTTGCTGAACAAGTCAT
CGAAATGATTCCTATCAATTCTATTAAAGAAGCAATTTCTCAAAGGGCGCATCGTTATCTAACAAAAGGTTGA

Upstream 100 bases:

>100_bases
ATTATATTAAACCTCATTTTGTGCATGTCATGTTAGGTGGAAAAATTGTTCAATCAGGTGGGCCTGAGCTTGCTCTCGAA
TTGGAAAGTAAAGGATATGA

Downstream 100 bases:

>100_bases
TTATGAATCCTTTAGAAAAATCTGCTGTTAACAGGCTCAGGCAAGACTTTCCCATGTTGAATAAAATGATGCATGGACAT
CCTCTTATTTATTTCGATTC

Product: putative sufD

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 450; Mature: 449

Protein sequence:

>450_residues
MARSITERGGCLMTFELGLEQKIFTSLLEKHLDAINQGDPLQKARQKAWSQFLERGLPTKQSEAYRYIKLRHLFSQNYEF
PKEESITKDQIASLVYPECQHSFLVFINGQFCSEFSETKNLPSQVIISTLQEANQTFGTFFNNYWSKSLKEENDSFALIN
SALHHQGAFIYIPPKTIVETPIQILHLVQAQGQLLMLMPRINVCVGAQAEVKFVSSIHQKSMNGYFINQVTDFLVEDQAY
VHYTQILNEEHVQAWHFEAVRAHLKKQSTFKTVCITEGGMTVRNDYHISLSGENAEVLLNGISMLEDKREVHTHIFIDHQ
APNCRSYQLFKAVLNDFSRSSFEGKIMVRQKAQKTEAFQLNNNLLLSDHAHADSKPNLEIFADDVKASHGATVGQLDAEQ
LFYMKTRGFPEMAAKNLLIYGFAEQVIEMIPINSIKEAISQRAHRYLTKG

Sequences:

>Translated_450_residues
MARSITERGGCLMTFELGLEQKIFTSLLEKHLDAINQGDPLQKARQKAWSQFLERGLPTKQSEAYRYIKLRHLFSQNYEF
PKEESITKDQIASLVYPECQHSFLVFINGQFCSEFSETKNLPSQVIISTLQEANQTFGTFFNNYWSKSLKEENDSFALIN
SALHHQGAFIYIPPKTIVETPIQILHLVQAQGQLLMLMPRINVCVGAQAEVKFVSSIHQKSMNGYFINQVTDFLVEDQAY
VHYTQILNEEHVQAWHFEAVRAHLKKQSTFKTVCITEGGMTVRNDYHISLSGENAEVLLNGISMLEDKREVHTHIFIDHQ
APNCRSYQLFKAVLNDFSRSSFEGKIMVRQKAQKTEAFQLNNNLLLSDHAHADSKPNLEIFADDVKASHGATVGQLDAEQ
LFYMKTRGFPEMAAKNLLIYGFAEQVIEMIPINSIKEAISQRAHRYLTKG
>Mature_449_residues
ARSITERGGCLMTFELGLEQKIFTSLLEKHLDAINQGDPLQKARQKAWSQFLERGLPTKQSEAYRYIKLRHLFSQNYEFP
KEESITKDQIASLVYPECQHSFLVFINGQFCSEFSETKNLPSQVIISTLQEANQTFGTFFNNYWSKSLKEENDSFALINS
ALHHQGAFIYIPPKTIVETPIQILHLVQAQGQLLMLMPRINVCVGAQAEVKFVSSIHQKSMNGYFINQVTDFLVEDQAYV
HYTQILNEEHVQAWHFEAVRAHLKKQSTFKTVCITEGGMTVRNDYHISLSGENAEVLLNGISMLEDKREVHTHIFIDHQA
PNCRSYQLFKAVLNDFSRSSFEGKIMVRQKAQKTEAFQLNNNLLLSDHAHADSKPNLEIFADDVKASHGATVGQLDAEQL
FYMKTRGFPEMAAKNLLIYGFAEQVIEMIPINSIKEAISQRAHRYLTKG

Specific function: FhuF function [C]

COG id: COG0719

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0051 (ycf24) family [H]

Homologues:

Organism=Escherichia coli, GI1787971, Length=404, Percent_Identity=27.970297029703, Blast_Score=140, Evalue=2e-34,
Organism=Escherichia coli, GI87081955, Length=327, Percent_Identity=19.8776758409786, Blast_Score=71, Evalue=1e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000825
- InterPro:   IPR011542 [H]

Pfam domain/function: PF01458 UPF0051 [H]

EC number: NA

Molecular weight: Translated: 51420; Mature: 51289

Theoretical pI: Translated: 6.93; Mature: 6.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARSITERGGCLMTFELGLEQKIFTSLLEKHLDAINQGDPLQKARQKAWSQFLERGLPTK
CCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCC
QSEAYRYIKLRHLFSQNYEFPKEESITKDQIASLVYPECQHSFLVFINGQFCSEFSETKN
HHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHC
LPSQVIISTLQEANQTFGTFFNNYWSKSLKEENDSFALINSALHHQGAFIYIPPKTIVET
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEECCHHHHHH
PIQILHLVQAQGQLLMLMPRINVCVGAQAEVKFVSSIHQKSMNGYFINQVTDFLVEDQAY
HHHHHHHHHHCCCEEEEECCCCEEECCCHHHHHHHHHHHHHCCCEEHHHHHHHHHCCCHH
VHYTQILNEEHVQAWHFEAVRAHLKKQSTFKTVCITEGGMTVRNDYHISLSGENAEVLLN
HHHHHHHCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCEEEECEEEEEECCCCHHHHHH
GISMLEDKREVHTHIFIDHQAPNCRSYQLFKAVLNDFSRSSFEGKIMVRQKAQKTEAFQL
HHHHHHHHHHHEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEHHHHHCHHEEE
NNNLLLSDHAHADSKPNLEIFADDVKASHGATVGQLDAEQLFYMKTRGFPEMAAKNLLIY
CCCEEEECCCCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHCCEEEE
GFAEQVIEMIPINSIKEAISQRAHRYLTKG
HHHHHHHHHCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
ARSITERGGCLMTFELGLEQKIFTSLLEKHLDAINQGDPLQKARQKAWSQFLERGLPTK
CCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCC
QSEAYRYIKLRHLFSQNYEFPKEESITKDQIASLVYPECQHSFLVFINGQFCSEFSETKN
HHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHC
LPSQVIISTLQEANQTFGTFFNNYWSKSLKEENDSFALINSALHHQGAFIYIPPKTIVET
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCEEEECCHHHHHH
PIQILHLVQAQGQLLMLMPRINVCVGAQAEVKFVSSIHQKSMNGYFINQVTDFLVEDQAY
HHHHHHHHHHCCCEEEEECCCCEEECCCHHHHHHHHHHHHHCCCEEHHHHHHHHHCCCHH
VHYTQILNEEHVQAWHFEAVRAHLKKQSTFKTVCITEGGMTVRNDYHISLSGENAEVLLN
HHHHHHHCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCEEEECEEEEEECCCCHHHHHH
GISMLEDKREVHTHIFIDHQAPNCRSYQLFKAVLNDFSRSSFEGKIMVRQKAQKTEAFQL
HHHHHHHHHHHEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEHHHHHCHHEEE
NNNLLLSDHAHADSKPNLEIFADDVKASHGATVGQLDAEQLFYMKTRGFPEMAAKNLLIY
CCCEEEECCCCCCCCCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHCCEEEE
GFAEQVIEMIPINSIKEAISQRAHRYLTKG
HHHHHHHHHCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]