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The map label for this gene is sufC [C]

Identifier: 46445824

GI number: 46445824

Start: 283938

End: 284702

Strand: Direct

Name: sufC [C]

Synonym: pc0190

Alternate gene names: 46445824

Gene position: 283938-284702 (Clockwise)

Preceding gene: 46445823

Following gene: 46445825

Centisome position: 11.76

GC content: 38.3

Gene sequence:

>765_bases
ATGCTAAAAATTAAAGAATTAACAGCAACCGTAGAGGGAACTCCGATTTTAAAAGGGGTTAATCTTCATATCAAAACGGG
AGAAATTCATGCGATTATGGGCCCAAATGGGGCAGGTAAATCGACTTTGGCAAAAGTATTAGCTGGCCATCCTGCTTATG
AAGTAACAGGGGGGGAAGTTTGGTTTAAAGGACAGAACTTACTTGAGTTAGAACCTGAAGAACGCGCTCATTTAGGTTTG
TTTATGAGTTTTCAATATCCTGTTGAAATTCCTGGTGTTAGTAATAGCCAATTTCTTCAAATTGCTTTGAATGCCAAACT
TAAAGCTGAGGGGAAATCAGAACTGACAACGGCTGAATTTGAAAGGTTACTAAACGAGAAAATGAAGCAAATGGAAATTA
AGCCAGAACTTCGATCGCGTAATGTAAATGAAAATTTTTCGGGCGGCGAAAAAAAACGGAATGAAATTTTACAAATGGCG
GTTTTAAACCCAAATCTTGCTTTATTGGATGAAACTGACTCAGGTTTAGATATTGATGCGATGCGCGTTGTGGCAAAAGG
AGTCAATCAATTAATGAATCCTGAAATGGGTTTATTATTGATCACTCATTATCAACGGCTTCTTGATTATATTAAACCTC
ATTTTGTGCATGTCATGTTAGGTGGAAAAATTGTTCAATCAGGTGGGCCTGAGCTTGCTCTCGAATTGGAAAGTAAAGGA
TATGATTGGCTCGTTCAATCACCGAAAGAGGGGGTTGTCTCATGA

Upstream 100 bases:

>100_bases
ATTTATTGCGCTGTTCAGTTTACTTATTAAAGTGCTTTTGGCGCTAAAATAGAATGAAAGAGAGATTAAAAATCTTTAGA
TATTAGATTAGGAATGAATC

Downstream 100 bases:

>100_bases
CATTCGAATTGGGCCTAGAGCAAAAAATCTTTACAAGTTTATTGGAAAAGCATTTGGATGCCATTAATCAAGGAGATCCT
TTGCAGAAGGCTCGTCAGAA

Product: ABC transporter ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 254; Mature: 254

Protein sequence:

>254_residues
MLKIKELTATVEGTPILKGVNLHIKTGEIHAIMGPNGAGKSTLAKVLAGHPAYEVTGGEVWFKGQNLLELEPEERAHLGL
FMSFQYPVEIPGVSNSQFLQIALNAKLKAEGKSELTTAEFERLLNEKMKQMEIKPELRSRNVNENFSGGEKKRNEILQMA
VLNPNLALLDETDSGLDIDAMRVVAKGVNQLMNPEMGLLLITHYQRLLDYIKPHFVHVMLGGKIVQSGGPELALELESKG
YDWLVQSPKEGVVS

Sequences:

>Translated_254_residues
MLKIKELTATVEGTPILKGVNLHIKTGEIHAIMGPNGAGKSTLAKVLAGHPAYEVTGGEVWFKGQNLLELEPEERAHLGL
FMSFQYPVEIPGVSNSQFLQIALNAKLKAEGKSELTTAEFERLLNEKMKQMEIKPELRSRNVNENFSGGEKKRNEILQMA
VLNPNLALLDETDSGLDIDAMRVVAKGVNQLMNPEMGLLLITHYQRLLDYIKPHFVHVMLGGKIVQSGGPELALELESKG
YDWLVQSPKEGVVS
>Mature_254_residues
MLKIKELTATVEGTPILKGVNLHIKTGEIHAIMGPNGAGKSTLAKVLAGHPAYEVTGGEVWFKGQNLLELEPEERAHLGL
FMSFQYPVEIPGVSNSQFLQIALNAKLKAEGKSELTTAEFERLLNEKMKQMEIKPELRSRNVNENFSGGEKKRNEILQMA
VLNPNLALLDETDSGLDIDAMRVVAKGVNQLMNPEMGLLLITHYQRLLDYIKPHFVHVMLGGKIVQSGGPELALELESKG
YDWLVQSPKEGVVS

Specific function: Unknown

COG id: COG0396

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, ATPase component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI42741659, Length=215, Percent_Identity=26.046511627907, Blast_Score=66, Evalue=2e-11,
Organism=Homo sapiens, GI9961252, Length=220, Percent_Identity=25.9090909090909, Blast_Score=65, Evalue=5e-11,
Organism=Homo sapiens, GI4505771, Length=220, Percent_Identity=25.9090909090909, Blast_Score=65, Evalue=6e-11,
Organism=Homo sapiens, GI9665248, Length=241, Percent_Identity=26.1410788381743, Blast_Score=64, Evalue=1e-10,
Organism=Escherichia coli, GI1787972, Length=246, Percent_Identity=56.9105691056911, Blast_Score=291, Evalue=2e-80,
Organism=Escherichia coli, GI87082267, Length=233, Percent_Identity=30.0429184549356, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1789593, Length=207, Percent_Identity=27.536231884058, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1787792, Length=229, Percent_Identity=26.2008733624454, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI87081791, Length=242, Percent_Identity=28.099173553719, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1789962, Length=223, Percent_Identity=29.1479820627803, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1789864, Length=238, Percent_Identity=27.3109243697479, Blast_Score=69, Evalue=2e-13,
Organism=Escherichia coli, GI1787029, Length=239, Percent_Identity=23.8493723849372, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI87081782, Length=235, Percent_Identity=25.531914893617, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1787500, Length=218, Percent_Identity=29.3577981651376, Blast_Score=66, Evalue=3e-12,
Organism=Escherichia coli, GI48995001, Length=207, Percent_Identity=28.0193236714976, Blast_Score=65, Evalue=3e-12,
Organism=Escherichia coli, GI1786398, Length=225, Percent_Identity=29.7777777777778, Blast_Score=65, Evalue=4e-12,
Organism=Escherichia coli, GI1787370, Length=233, Percent_Identity=24.4635193133047, Blast_Score=65, Evalue=6e-12,
Organism=Escherichia coli, GI1788053, Length=183, Percent_Identity=28.9617486338798, Blast_Score=64, Evalue=7e-12,
Organism=Escherichia coli, GI87081709, Length=238, Percent_Identity=23.5294117647059, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1788225, Length=245, Percent_Identity=25.7142857142857, Blast_Score=62, Evalue=3e-11,
Organism=Escherichia coli, GI1790467, Length=240, Percent_Identity=28.3333333333333, Blast_Score=61, Evalue=6e-11,
Organism=Escherichia coli, GI1786319, Length=208, Percent_Identity=28.3653846153846, Blast_Score=60, Evalue=1e-10,
Organism=Escherichia coli, GI1790525, Length=215, Percent_Identity=28.8372093023256, Blast_Score=60, Evalue=1e-10,
Organism=Caenorhabditis elegans, GI17541710, Length=219, Percent_Identity=28.7671232876712, Blast_Score=71, Evalue=6e-13,
Organism=Caenorhabditis elegans, GI71996809, Length=238, Percent_Identity=28.1512605042017, Blast_Score=67, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17558664, Length=217, Percent_Identity=25.8064516129032, Blast_Score=66, Evalue=1e-11,
Organism=Saccharomyces cerevisiae, GI6324498, Length=222, Percent_Identity=27.027027027027, Blast_Score=65, Evalue=8e-12,
Organism=Drosophila melanogaster, GI161076682, Length=180, Percent_Identity=32.7777777777778, Blast_Score=71, Evalue=6e-13,
Organism=Drosophila melanogaster, GI161076684, Length=180, Percent_Identity=32.7777777777778, Blast_Score=71, Evalue=7e-13,
Organism=Drosophila melanogaster, GI24581617, Length=180, Percent_Identity=32.7777777777778, Blast_Score=71, Evalue=7e-13,
Organism=Drosophila melanogaster, GI24581615, Length=180, Percent_Identity=32.7777777777778, Blast_Score=71, Evalue=7e-13,
Organism=Drosophila melanogaster, GI24662800, Length=223, Percent_Identity=30.9417040358744, Blast_Score=68, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR010230 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 28036; Mature: 28036

Theoretical pI: Translated: 6.17; Mature: 6.17

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKIKELTATVEGTPILKGVNLHIKTGEIHAIMGPNGAGKSTLAKVLAGHPAYEVTGGEV
CEEEHHEEEEECCCEEEECCEEEEECCEEEEEECCCCCCHHHHHHHHHCCCCEEECCCEE
WFKGQNLLELEPEERAHLGLFMSFQYPVEIPGVSNSQFLQIALNAKLKAEGKSELTTAEF
EECCCCEEEECCCCCCEEEEEEEEECCEECCCCCCCCEEEEEECCEEECCCCCCCCHHHH
ERLLNEKMKQMEIKPELRSRNVNENFSGGEKKRNEILQMAVLNPNLALLDETDSGLDIDA
HHHHHHHHHHCCCCCHHHCCCCCCCCCCCHHHHHHHEEEEEECCCEEEEECCCCCCCHHH
MRVVAKGVNQLMNPEMGLLLITHYQRLLDYIKPHFVHVMLGGKIVQSGGPELALELESKG
HHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHCHHEEEEEECCEEEECCCCEEEEEECCCC
YDWLVQSPKEGVVS
CEEEEECCCCCCCC
>Mature Secondary Structure
MLKIKELTATVEGTPILKGVNLHIKTGEIHAIMGPNGAGKSTLAKVLAGHPAYEVTGGEV
CEEEHHEEEEECCCEEEECCEEEEECCEEEEEECCCCCCHHHHHHHHHCCCCEEECCCEE
WFKGQNLLELEPEERAHLGLFMSFQYPVEIPGVSNSQFLQIALNAKLKAEGKSELTTAEF
EECCCCEEEECCCCCCEEEEEEEEECCEECCCCCCCCEEEEEECCEEECCCCCCCCHHHH
ERLLNEKMKQMEIKPELRSRNVNENFSGGEKKRNEILQMAVLNPNLALLDETDSGLDIDA
HHHHHHHHHHCCCCCHHHCCCCCCCCCCCHHHHHHHEEEEEECCCEEEEECCCCCCCHHH
MRVVAKGVNQLMNPEMGLLLITHYQRLLDYIKPHFVHVMLGGKIVQSGGPELALELESKG
HHHHHHHHHHHCCCCCCEEHHHHHHHHHHHHCHHEEEEEECCEEEECCCCEEEEEECCCC
YDWLVQSPKEGVVS
CEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]