| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is tyrP_2 [H]
Identifier: 46445803
GI number: 46445803
Start: 248122
End: 249321
Strand: Direct
Name: tyrP_2 [H]
Synonym: pc0169
Alternate gene names: 46445803
Gene position: 248122-249321 (Clockwise)
Preceding gene: 46445802
Following gene: 46445804
Centisome position: 10.28
GC content: 37.25
Gene sequence:
>1200_bases ATGACCAATGATAAATATCGTTTATTAGGCGGTATTCTCCTTGTTGCTGGAACGACAATAGGAGCAGGGATGCTCGCTCT TCCAATTGTAACAGGATTTGCAGGGTTTATTCCTTCGATTGTTCTGTTTGTGATTTATTGGGTTTTTATGACTTTCACAG CCCTTTTGATGTTAGAGGTTAACTTATGGATGGGAGAGCATACTAATCTGATTACGATGGCTAAAAAAACGCTTGGAAGA GGTGGACAAGCGATTAGTTGGATGATTTACCTCTTCCTTTTATATACATTGACAACTGCGTATGTAGCGGGGGGAGGTCA TATCATTGTTGATTTTGCAAGGCAAGTTACTGAATGGAATCTGCCAAGCTGGATAGGGCCTCTTCCTTTGTTGGGAATTT TTGGTTTTTTTGTTTATAAAGGAGCTCGTTCAGTAGATTATGTTAATCGAATTTTGATGGGCGGATTAGTTTTGACTTAT GTTTGCATGGTCTTCTTTTTATCATCTCATATACAACCGATTCTTTTAAAACATCAAAGGTGGGATGCGCTTTGGATTGC AGTCCCTATTGTGTCAACCTCATTTGGTTTTCATATTATTATTCCTACCCTGACTGACTATTTGAAACGAGATGTCAAGC AAATTAGAAATGTCATTTTAATCGGCGGTGCAATCCCGCTTTTGATTTACGTTAGCTGGGAATTGCTAACACTTGGAATT ATTCCATTGCAGGGAGAAAATGGGTTGTTAATGGGATATGAAAAAGGTTTAGATGGGGCCACTTTAATGAGTCAATTACT TGAACACTCTGAACTTTCTCTTTTAGCAAGGTTGTTTTCCCTTTTTGCCATTCTAACTTCATTTTTAGGGGTCTCATTGA GTTTGCGAGATTTTTTATCTGACGGATTGAAAATTCAAAAATCAAATAAAGGAAGATTTGTTCTTTATTTACTGACATTT ATTCCTCCTCTTCTTCTAACTTTAACAGATCCACGGGCGTTTTTAAATGCCTTAGAATACGCTGGGGCATTTGGAGTTGT TACCTTACTTGGCTTGATTCCTATTTTAATGGTTTGGCGTGGACGTTATCATTTAAAATTGCCTTCAACTTTTAAAGCTC CTGGAGGCAAAATAGCTTTAATCTTAGCATTACTTGTGTCATTAGGCGTGATTGGAATGGAAATTTTTAATAAAGTGTAG
Upstream 100 bases:
>100_bases ATTGTTCCCGGAGGGAGGCCACTTTTAATTGGCGTCATTCTATTTTCTCTATGGATTATGGCCCTTCAACTTATTTAATA AATACTCAGGATGTAGCGAA
Downstream 100 bases:
>100_bases GATAAACGGAATATATCATATGACAGAAAAAAAACGGATTTTAACAGGAGACCGTCCAACAGGTCTTCTGCATTTGGGAC ATTATGTCGGCTCCTTAAAA
Product: putative tyrosine/tryptophan transport protein
Products: Proton [Cytoplasm]; L-tyrosine [Cytoplasm] [C]
Alternate protein names: Tyrosine permease [H]
Number of amino acids: Translated: 399; Mature: 398
Protein sequence:
>399_residues MTNDKYRLLGGILLVAGTTIGAGMLALPIVTGFAGFIPSIVLFVIYWVFMTFTALLMLEVNLWMGEHTNLITMAKKTLGR GGQAISWMIYLFLLYTLTTAYVAGGGHIIVDFARQVTEWNLPSWIGPLPLLGIFGFFVYKGARSVDYVNRILMGGLVLTY VCMVFFLSSHIQPILLKHQRWDALWIAVPIVSTSFGFHIIIPTLTDYLKRDVKQIRNVILIGGAIPLLIYVSWELLTLGI IPLQGENGLLMGYEKGLDGATLMSQLLEHSELSLLARLFSLFAILTSFLGVSLSLRDFLSDGLKIQKSNKGRFVLYLLTF IPPLLLTLTDPRAFLNALEYAGAFGVVTLLGLIPILMVWRGRYHLKLPSTFKAPGGKIALILALLVSLGVIGMEIFNKV
Sequences:
>Translated_399_residues MTNDKYRLLGGILLVAGTTIGAGMLALPIVTGFAGFIPSIVLFVIYWVFMTFTALLMLEVNLWMGEHTNLITMAKKTLGR GGQAISWMIYLFLLYTLTTAYVAGGGHIIVDFARQVTEWNLPSWIGPLPLLGIFGFFVYKGARSVDYVNRILMGGLVLTY VCMVFFLSSHIQPILLKHQRWDALWIAVPIVSTSFGFHIIIPTLTDYLKRDVKQIRNVILIGGAIPLLIYVSWELLTLGI IPLQGENGLLMGYEKGLDGATLMSQLLEHSELSLLARLFSLFAILTSFLGVSLSLRDFLSDGLKIQKSNKGRFVLYLLTF IPPLLLTLTDPRAFLNALEYAGAFGVVTLLGLIPILMVWRGRYHLKLPSTFKAPGGKIALILALLVSLGVIGMEIFNKV >Mature_398_residues TNDKYRLLGGILLVAGTTIGAGMLALPIVTGFAGFIPSIVLFVIYWVFMTFTALLMLEVNLWMGEHTNLITMAKKTLGRG GQAISWMIYLFLLYTLTTAYVAGGGHIIVDFARQVTEWNLPSWIGPLPLLGIFGFFVYKGARSVDYVNRILMGGLVLTYV CMVFFLSSHIQPILLKHQRWDALWIAVPIVSTSFGFHIIIPTLTDYLKRDVKQIRNVILIGGAIPLLIYVSWELLTLGII PLQGENGLLMGYEKGLDGATLMSQLLEHSELSLLARLFSLFAILTSFLGVSLSLRDFLSDGLKIQKSNKGRFVLYLLTFI PPLLLTLTDPRAFLNALEYAGAFGVVTLLGLIPILMVWRGRYHLKLPSTFKAPGGKIALILALLVSLGVIGMEIFNKV
Specific function: Involved in transporting tyrosine across the cytoplasmic membrane [H]
COG id: COG0814
COG function: function code E; Amino acid permeases
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the amino acid/polyamine transporter 2 family. Mtr/TnaB/TyrP permease subfamily [H]
Homologues:
Organism=Escherichia coli, GI1788218, Length=398, Percent_Identity=36.9346733668342, Blast_Score=216, Evalue=2e-57, Organism=Escherichia coli, GI1789552, Length=371, Percent_Identity=32.0754716981132, Blast_Score=140, Evalue=1e-34, Organism=Escherichia coli, GI1790145, Length=407, Percent_Identity=28.7469287469287, Blast_Score=132, Evalue=4e-32,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002091 - InterPro: IPR013061 - InterPro: IPR013059 - InterPro: IPR018227 [H]
Pfam domain/function: PF03222 Trp_Tyr_perm [H]
EC number: NA
Molecular weight: Translated: 44145; Mature: 44014
Theoretical pI: Translated: 9.90; Mature: 9.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNDKYRLLGGILLVAGTTIGAGMLALPIVTGFAGFIPSIVLFVIYWVFMTFTALLMLEV CCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NLWMGEHTNLITMAKKTLGRGGQAISWMIYLFLLYTLTTAYVAGGGHIIVDFARQVTEWN HHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCC LPSWIGPLPLLGIFGFFVYKGARSVDYVNRILMGGLVLTYVCMVFFLSSHIQPILLKHQR CCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCC WDALWIAVPIVSTSFGFHIIIPTLTDYLKRDVKQIRNVILIGGAIPLLIYVSWELLTLGI CCEEEEEEEHHHCCCCCEEEHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHHHHHHHEEE IPLQGENGLLMGYEKGLDGATLMSQLLEHSELSLLARLFSLFAILTSFLGVSLSLRDFLS EEEECCCCEEEEHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH DGLKIQKSNKGRFVLYLLTFIPPLLLTLTDPRAFLNALEYAGAFGVVTLLGLIPILMVWR CCCEEEECCCCCEEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GRYHLKLPSTFKAPGGKIALILALLVSLGVIGMEIFNKV CCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure TNDKYRLLGGILLVAGTTIGAGMLALPIVTGFAGFIPSIVLFVIYWVFMTFTALLMLEV CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH NLWMGEHTNLITMAKKTLGRGGQAISWMIYLFLLYTLTTAYVAGGGHIIVDFARQVTEWN HHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCC LPSWIGPLPLLGIFGFFVYKGARSVDYVNRILMGGLVLTYVCMVFFLSSHIQPILLKHQR CCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCC WDALWIAVPIVSTSFGFHIIIPTLTDYLKRDVKQIRNVILIGGAIPLLIYVSWELLTLGI CCEEEEEEEHHHCCCCCEEEHHHHHHHHHHHHHHHHHEEEECCHHHHHHHHHHHHHHEEE IPLQGENGLLMGYEKGLDGATLMSQLLEHSELSLLARLFSLFAILTSFLGVSLSLRDFLS EEEECCCCEEEEHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH DGLKIQKSNKGRFVLYLLTFIPPLLLTLTDPRAFLNALEYAGAFGVVTLLGLIPILMVWR CCCEEEECCCCCEEEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GRYHLKLPSTFKAPGGKIALILALLVSLGVIGMEIFNKV CCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; L-tyrosine [Periplasm] [C]
Specific reaction: Proton [Periplasm] + L-tyrosine [Periplasm] = Proton [Cytoplasm] + L-tyrosine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 3049553; 9097040; 9278503 [H]