| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46445798
Identifier: 46445798
GI number: 46445798
Start: 243195
End: 243659
Strand: Reverse
Name: 46445798
Synonym: pc0164
Alternate gene names: NA
Gene position: 243659-243195 (Counterclockwise)
Preceding gene: 46445799
Following gene: 46445794
Centisome position: 10.09
GC content: 33.12
Gene sequence:
>465_bases ATGATTCAAGGGTTTTATAACACTGTAGTGGCAGATGTTGAATATTTAAAGGTTTTCTTTCAAAAAAATCCTGAGCAAAG GTCATTTGATCTGAAAGTGAATTTGATAGCACTACGTTTTTTAAGTTTAGGCTTAATGGCTGTCGGTGTAATTAGAACAT ATACAGCTCTAACTTCAGCTTCTCCAGCAATTTTTAGAGCTGTTAGTGGATTTTTTGTTTTTGCTATTGGACATGATTTG TTTGTCATAAGTCAAAATATGACAAAAGATGATGAAAATAAATTTGTCGGTTTTACAAATACCCTTATGAGTTCATTGAG AGATCTCGGCCATGCATTTAATGGCAATTCTCAAAGAGTTGGAGAAGGAAGGGTATCTATTTTGACACGTAGAACATTTT TCCCCTCGTTTTGGAATTGTATTCTTCAAAATTCTTTTTCTACAAATACCCAAACTTCGAGATAA
Upstream 100 bases:
>100_bases ACAACCAAATGAGATTACTTTAAACAAGTTTTTGTTAAATTTTTTTGTCAAAGTTGATTTGAATTAAATTATTATTAATA AAGAAATATGATGAGGTATT
Downstream 100 bases:
>100_bases ATTCAATTAGGATTGAATGAAGTAGAATTTACGAAAATCCATCGCAAATTCTACTAATGGTGATGAAAAGTGGATAAGTC TGGTATTACCATAAGGCTTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 154; Mature: 154
Protein sequence:
>154_residues MIQGFYNTVVADVEYLKVFFQKNPEQRSFDLKVNLIALRFLSLGLMAVGVIRTYTALTSASPAIFRAVSGFFVFAIGHDL FVISQNMTKDDENKFVGFTNTLMSSLRDLGHAFNGNSQRVGEGRVSILTRRTFFPSFWNCILQNSFSTNTQTSR
Sequences:
>Translated_154_residues MIQGFYNTVVADVEYLKVFFQKNPEQRSFDLKVNLIALRFLSLGLMAVGVIRTYTALTSASPAIFRAVSGFFVFAIGHDL FVISQNMTKDDENKFVGFTNTLMSSLRDLGHAFNGNSQRVGEGRVSILTRRTFFPSFWNCILQNSFSTNTQTSR >Mature_154_residues MIQGFYNTVVADVEYLKVFFQKNPEQRSFDLKVNLIALRFLSLGLMAVGVIRTYTALTSASPAIFRAVSGFFVFAIGHDL FVISQNMTKDDENKFVGFTNTLMSSLRDLGHAFNGNSQRVGEGRVSILTRRTFFPSFWNCILQNSFSTNTQTSR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17372; Mature: 17372
Theoretical pI: Translated: 10.28; Mature: 10.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIQGFYNTVVADVEYLKVFFQKNPEQRSFDLKVNLIALRFLSLGLMAVGVIRTYTALTSA CCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCC SPAIFRAVSGFFVFAIGHDLFVISQNMTKDDENKFVGFTNTLMSSLRDLGHAFNGNSQRV CHHHHHHHHHHEEEEECCEEEEEECCCCCCCCCCEECHHHHHHHHHHHHHHHCCCCCCCC GEGRVSILTRRTFFPSFWNCILQNSFSTNTQTSR CCCCEEEEEHHHCCHHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure MIQGFYNTVVADVEYLKVFFQKNPEQRSFDLKVNLIALRFLSLGLMAVGVIRTYTALTSA CCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCC SPAIFRAVSGFFVFAIGHDLFVISQNMTKDDENKFVGFTNTLMSSLRDLGHAFNGNSQRV CHHHHHHHHHHEEEEECCEEEEEECCCCCCCCCCEECHHHHHHHHHHHHHHHCCCCCCCC GEGRVSILTRRTFFPSFWNCILQNSFSTNTQTSR CCCCEEEEEHHHCCHHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA