| Definition | Candidatus Protochlamydia amoebophila UWE25, complete genome. |
|---|---|
| Accession | NC_005861 |
| Length | 2,414,465 |
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The map label for this gene is 46445779
Identifier: 46445779
GI number: 46445779
Start: 219609
End: 220355
Strand: Reverse
Name: 46445779
Synonym: pc0145
Alternate gene names: NA
Gene position: 220355-219609 (Counterclockwise)
Preceding gene: 46445781
Following gene: 46445773
Centisome position: 9.13
GC content: 36.95
Gene sequence:
>747_bases ATGAGATCTTCTAATCCTGCTCTTGCTGGGAATCCATTTTCAGGATTTGGCATTGCGTCCAAATCCAGTGCCATGACAAT TCGTGGAACAATCAACAAAACAGCTATCTTACTCCTACTAGTATTTCTTCCTGCCATCTGGGTTTGGAAAACTTTTTTTA ATGCTGGACAAAATCCAGCTGCTATTCAAACTTGGATGATGGTTGGCTTGATCGGCGGATTTGTTTTATCTTTAGTCACT GTGTTTAAAAAAGAGTGGGCTCCATTATCAGCGCCCTTATATGCTATTATGGAAGGTCTATTCTTAGGAGGAATTTCAAG TATTTTTGAAACTTCTTATCCAGGAATTGTCATGCAAGCAATAAGTTTGACACTTGCTACTTTACTTGCCATGTTAGTTA TTTACCAAACCGGACTAGTTAAACCAACTGAAAATTTTAAACTAGGAGTCATGGCCGCTACAGGAGGAATTGCTCTTGTT TATTTAGTCGCTATTGTCTTAGGATTTTTTGGAATCAATGTTTCTTTTATTAACGGAAGTGGTTTATTTAGCATTCTTTT TAGCTTGTTTGTCGTAGGAATTGCTGCTTTAAATTTTATTATTGATTTTGATTTCATTGAACAAGGGGCGCGAGCCAACG TTCCTAAATATATGGAATGGTATGGGGCATTTGCTTTGATGGTAACGCTTGTTTGGCTTTATATTGAAATGTTACGTTTG CTTGCTAAACTTAACGATCGTCGTTAA
Upstream 100 bases:
>100_bases CTTTTCTTTCAAAGCTTTTAATCCTCTCGTAAAGACTTGTCAAATAAGGCTCTGAAGAAGTAATCTATTTTTTTTACAAC CAAAGTATAAGGAGTGCTCT
Downstream 100 bases:
>100_bases TTCTCAATCAGTCGTCGATGTAGGCTATCTACATCGACTTACTTATAATAAAGATAGTCATAGAAATCGGCTTCATTAGT CAACAAAATACTATGATAAA
Product: hypothetical protein
Products: NA
Alternate protein names: Transmembrane Protein; Permease Of Facilitator Superfamily Protein; Membrane Spanning Protein
Number of amino acids: Translated: 248; Mature: 248
Protein sequence:
>248_residues MRSSNPALAGNPFSGFGIASKSSAMTIRGTINKTAILLLLVFLPAIWVWKTFFNAGQNPAAIQTWMMVGLIGGFVLSLVT VFKKEWAPLSAPLYAIMEGLFLGGISSIFETSYPGIVMQAISLTLATLLAMLVIYQTGLVKPTENFKLGVMAATGGIALV YLVAIVLGFFGINVSFINGSGLFSILFSLFVVGIAALNFIIDFDFIEQGARANVPKYMEWYGAFALMVTLVWLYIEMLRL LAKLNDRR
Sequences:
>Translated_248_residues MRSSNPALAGNPFSGFGIASKSSAMTIRGTINKTAILLLLVFLPAIWVWKTFFNAGQNPAAIQTWMMVGLIGGFVLSLVT VFKKEWAPLSAPLYAIMEGLFLGGISSIFETSYPGIVMQAISLTLATLLAMLVIYQTGLVKPTENFKLGVMAATGGIALV YLVAIVLGFFGINVSFINGSGLFSILFSLFVVGIAALNFIIDFDFIEQGARANVPKYMEWYGAFALMVTLVWLYIEMLRL LAKLNDRR >Mature_248_residues MRSSNPALAGNPFSGFGIASKSSAMTIRGTINKTAILLLLVFLPAIWVWKTFFNAGQNPAAIQTWMMVGLIGGFVLSLVT VFKKEWAPLSAPLYAIMEGLFLGGISSIFETSYPGIVMQAISLTLATLLAMLVIYQTGLVKPTENFKLGVMAATGGIALV YLVAIVLGFFGINVSFINGSGLFSILFSLFVVGIAALNFIIDFDFIEQGARANVPKYMEWYGAFALMVTLVWLYIEMLRL LAKLNDRR
Specific function: Unknown
COG id: COG4760
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26976; Mature: 26976
Theoretical pI: Translated: 9.95; Mature: 9.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSSNPALAGNPFSGFGIASKSSAMTIRGTINKTAILLLLVFLPAIWVWKTFFNAGQNPA CCCCCCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH AIQTWMMVGLIGGFVLSLVTVFKKEWAPLSAPLYAIMEGLFLGGISSIFETSYPGIVMQA HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHH ISLTLATLLAMLVIYQTGLVKPTENFKLGVMAATGGIALVYLVAIVLGFFGINVSFINGS HHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCEEEEECCC GLFSILFSLFVVGIAALNFIIDFDFIEQGARANVPKYMEWYGAFALMVTLVWLYIEMLRL CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LAKLNDRR HHHHCCCC >Mature Secondary Structure MRSSNPALAGNPFSGFGIASKSSAMTIRGTINKTAILLLLVFLPAIWVWKTFFNAGQNPA CCCCCCCCCCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH AIQTWMMVGLIGGFVLSLVTVFKKEWAPLSAPLYAIMEGLFLGGISSIFETSYPGIVMQA HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHH ISLTLATLLAMLVIYQTGLVKPTENFKLGVMAATGGIALVYLVAIVLGFFGINVSFINGS HHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCEEEEECCC GLFSILFSLFVVGIAALNFIIDFDFIEQGARANVPKYMEWYGAFALMVTLVWLYIEMLRL CHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH LAKLNDRR HHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA