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The map label for this gene is 45658400

Identifier: 45658400

GI number: 45658400

Start: 3100454

End: 3100975

Strand: Reverse

Name: 45658400

Synonym: LIC12559

Alternate gene names: NA

Gene position: 3100975-3100454 (Counterclockwise)

Preceding gene: 45658401

Following gene: 45658395

Centisome position: 72.5

GC content: 36.21

Gene sequence:

>522_bases
ATGGATATTCTTTTATTAGATGACGGTCAAAAAATTCAATCTTCCTTGATAGAAGGTTCTGTCGGAACGGATTCTCTTTT
GGTTCCAGGTGTTTATTGGAATCGTTTGAATCTGCAAGAGAAAAAAGCACTTCGTAATAAACTTCCTTTTTTATTGAGAA
AATATTCTAAACAAATCGCGTCGATGAAGCGGCTTCATAATAAGGCAGGTAAAATCAAATACAATCGGGGTGTAGGTAAG
ATGAAAAAATTGAGTATTCGAGTTCATTCTGGTGTTTGGGCAACTTTAGGTGTGCTGGCCGCGGCTCATGGTGTTTCGAG
GTGTTATCTTTTTAATTATATGCTCTGGCTGGATGAACAAGGGGATTTTTTTGTAAAAACTTTGAACCGGGGAGTTCCTA
TTTTTCACTGGACTTACAAAATGATTTGGAAGATTGACAGGAGACAAAACTTCATATCGAGAGAATTACAATTTGAACCA
AATCCAATGACGAATCAATATCCGTACTATTTAAAAGAATAG

Upstream 100 bases:

>100_bases
TTAGTTACTTACGTCTAATTCATGTTAAAATATTTTATTTTCTTTAAAAAATTTTTCATAAATTGTTCCACGTCGAAGGA
TCCAAGAACCGTTTTCTAAT

Downstream 100 bases:

>100_bases
AAAAATCAATGTAAAAAAATCTAATTTCTCCATAAAAATTTACTATAAGTTAAAAGAAAGTTTGTATTAAGCACAGAATT
TAAACTGTACTACTAAAATC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 173; Mature: 173

Protein sequence:

>173_residues
MDILLLDDGQKIQSSLIEGSVGTDSLLVPGVYWNRLNLQEKKALRNKLPFLLRKYSKQIASMKRLHNKAGKIKYNRGVGK
MKKLSIRVHSGVWATLGVLAAAHGVSRCYLFNYMLWLDEQGDFFVKTLNRGVPIFHWTYKMIWKIDRRQNFISRELQFEP
NPMTNQYPYYLKE

Sequences:

>Translated_173_residues
MDILLLDDGQKIQSSLIEGSVGTDSLLVPGVYWNRLNLQEKKALRNKLPFLLRKYSKQIASMKRLHNKAGKIKYNRGVGK
MKKLSIRVHSGVWATLGVLAAAHGVSRCYLFNYMLWLDEQGDFFVKTLNRGVPIFHWTYKMIWKIDRRQNFISRELQFEP
NPMTNQYPYYLKE
>Mature_173_residues
MDILLLDDGQKIQSSLIEGSVGTDSLLVPGVYWNRLNLQEKKALRNKLPFLLRKYSKQIASMKRLHNKAGKIKYNRGVGK
MKKLSIRVHSGVWATLGVLAAAHGVSRCYLFNYMLWLDEQGDFFVKTLNRGVPIFHWTYKMIWKIDRRQNFISRELQFEP
NPMTNQYPYYLKE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20284; Mature: 20284

Theoretical pI: Translated: 10.56; Mature: 10.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDILLLDDGQKIQSSLIEGSVGTDSLLVPGVYWNRLNLQEKKALRNKLPFLLRKYSKQIA
CEEEEECCCHHHHHHHHCCCCCCCCEEECCEEECCCCHHHHHHHHHHHHHHHHHHHHHHH
SMKRLHNKAGKIKYNRGVGKMKKLSIRVHSGVWATLGVLAAAHGVSRCYLFNYMLWLDEQ
HHHHHHHHHCCEEECCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHEEEECCC
GDFFVKTLNRGVPIFHWTYKMIWKIDRRQNFISRELQFEPNPMTNQYPYYLKE
CCEEEEHHHCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECC
>Mature Secondary Structure
MDILLLDDGQKIQSSLIEGSVGTDSLLVPGVYWNRLNLQEKKALRNKLPFLLRKYSKQIA
CEEEEECCCHHHHHHHHCCCCCCCCEEECCEEECCCCHHHHHHHHHHHHHHHHHHHHHHH
SMKRLHNKAGKIKYNRGVGKMKKLSIRVHSGVWATLGVLAAAHGVSRCYLFNYMLWLDEQ
HHHHHHHHHCCEEECCCCCCEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHEEEECCC
GDFFVKTLNRGVPIFHWTYKMIWKIDRRQNFISRELQFEPNPMTNQYPYYLKE
CCEEEEHHHCCCCEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA