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The map label for this gene is ypdP [H]

Identifier: 45657587

GI number: 45657587

Start: 2097132

End: 2097908

Strand: Direct

Name: ypdP [H]

Synonym: LIC11721

Alternate gene names: 45657587

Gene position: 2097132-2097908 (Clockwise)

Preceding gene: 45657584

Following gene: 45657588

Centisome position: 49.03

GC content: 37.19

Gene sequence:

>777_bases
ATGAGAGACTGTCAAACGGTTCTTTTTTACAAGTTGACGAATTCGTGTGATAAGGATAAAAAATCGCTTATGCAACTTTC
TAAATCCGTGAAATTATTTATTATCTTAAATGCGTTCTTTTTATCTTTTTTAATTTTAGCGGAAGTAACCGGTTCCAAAC
TTTTTGTCTCATTTGGTTTTACCCTTACGATGGGAGTTATTCCGTTTCCGGTGACGTTTATTGTAACCGACCTTTTAAAC
GAATATTTTGGGAGAAAAGGAGTTCGTTTTACTACACTTGTCGGAATGGTTATGATCTTTGTGGCCTATTTTCTTTTGGT
GTTGGATATGTCTATTCCTGCGGCACCCAATTCTCCTGTAGACGATCATTCTTTTAACGTAGTTTTTGGGAATTCAGGAA
AGGTAATCGTAGGTTCGATTGTGGCGTATTTAATCGGTCAATTGATTGATATTCAGATCTTTCATTTTTTACGCGTAAAA
ACGAATAATAAATATATTTGGTTACGTGCCACAGGTTCTACAATCGTTTCTCAACTTGTGGATTCTTTTGTAGTGATTTA
TATCGCGCTCGGAGGGGGTAAACTTAGTTTTCAAGAATTGAATCAAATTTCCACTAATAACTTTCTTTATAAATGTGGGG
TGGCGATTGCAATTACTCCTTTGATCTACGTGGCTCATAGTTTGATCGATTGGTATTTAGGACCGATGGCGAAAACGATG
ATCCAAGAGGCGTTGGAACAAGGACGTTCGGATGTGGAACCAATTTCACCGGGATGA

Upstream 100 bases:

>100_bases
TGCCATCGGTTTTATAGTTTCATTATCGAATCAAAAACTAAGAAAATAAAGAAGTTTCTTAAATCGATGAACTGGAAACT
CACTTCCAAAAATTTATTAG

Downstream 100 bases:

>100_bases
ATCGAAATGGATTGAATTCGACAAAGTGTTTTTTTACGTTAAAGAATGGATAATCTTTGTTTCTTTTCTCAGAAGTTCTT
GAAAAACGAGAGCTTACGGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 258; Mature: 258

Protein sequence:

>258_residues
MRDCQTVLFYKLTNSCDKDKKSLMQLSKSVKLFIILNAFFLSFLILAEVTGSKLFVSFGFTLTMGVIPFPVTFIVTDLLN
EYFGRKGVRFTTLVGMVMIFVAYFLLVLDMSIPAAPNSPVDDHSFNVVFGNSGKVIVGSIVAYLIGQLIDIQIFHFLRVK
TNNKYIWLRATGSTIVSQLVDSFVVIYIALGGGKLSFQELNQISTNNFLYKCGVAIAITPLIYVAHSLIDWYLGPMAKTM
IQEALEQGRSDVEPISPG

Sequences:

>Translated_258_residues
MRDCQTVLFYKLTNSCDKDKKSLMQLSKSVKLFIILNAFFLSFLILAEVTGSKLFVSFGFTLTMGVIPFPVTFIVTDLLN
EYFGRKGVRFTTLVGMVMIFVAYFLLVLDMSIPAAPNSPVDDHSFNVVFGNSGKVIVGSIVAYLIGQLIDIQIFHFLRVK
TNNKYIWLRATGSTIVSQLVDSFVVIYIALGGGKLSFQELNQISTNNFLYKCGVAIAITPLIYVAHSLIDWYLGPMAKTM
IQEALEQGRSDVEPISPG
>Mature_258_residues
MRDCQTVLFYKLTNSCDKDKKSLMQLSKSVKLFIILNAFFLSFLILAEVTGSKLFVSFGFTLTMGVIPFPVTFIVTDLLN
EYFGRKGVRFTTLVGMVMIFVAYFLLVLDMSIPAAPNSPVDDHSFNVVFGNSGKVIVGSIVAYLIGQLIDIQIFHFLRVK
TNNKYIWLRATGSTIVSQLVDSFVVIYIALGGGKLSFQELNQISTNNFLYKCGVAIAITPLIYVAHSLIDWYLGPMAKTM
IQEALEQGRSDVEPISPG

Specific function: Unknown

COG id: COG1738

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003744 [H]

Pfam domain/function: PF02592 DUF165 [H]

EC number: NA

Molecular weight: Translated: 28672; Mature: 28672

Theoretical pI: Translated: 8.75; Mature: 8.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRDCQTVLFYKLTNSCDKDKKSLMQLSKSVKLFIILNAFFLSFLILAEVTGSKLFVSFGF
CCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECH
TLTMGVIPFPVTFIVTDLLNEYFGRKGVRFTTLVGMVMIFVAYFLLVLDMSIPAAPNSPV
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
DDHSFNVVFGNSGKVIVGSIVAYLIGQLIDIQIFHFLRVKTNNKYIWLRATGSTIVSQLV
CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEECCEEEEEEECHHHHHHHHH
DSFVVIYIALGGGKLSFQELNQISTNNFLYKCGVAIAITPLIYVAHSLIDWYLGPMAKTM
HHHHHHHEEECCCCCCHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IQEALEQGRSDVEPISPG
HHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MRDCQTVLFYKLTNSCDKDKKSLMQLSKSVKLFIILNAFFLSFLILAEVTGSKLFVSFGF
CCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECH
TLTMGVIPFPVTFIVTDLLNEYFGRKGVRFTTLVGMVMIFVAYFLLVLDMSIPAAPNSPV
HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC
DDHSFNVVFGNSGKVIVGSIVAYLIGQLIDIQIFHFLRVKTNNKYIWLRATGSTIVSQLV
CCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHEEEEECCEEEEEEECHHHHHHHHH
DSFVVIYIALGGGKLSFQELNQISTNNFLYKCGVAIAITPLIYVAHSLIDWYLGPMAKTM
HHHHHHHEEECCCCCCHHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IQEALEQGRSDVEPISPG
HHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]