Click here to switch to the map view.

The map label for this gene is 45657588

Identifier: 45657588

GI number: 45657588

Start: 2098067

End: 2098585

Strand: Direct

Name: 45657588

Synonym: LIC11722

Alternate gene names: NA

Gene position: 2098067-2098585 (Clockwise)

Preceding gene: 45657587

Following gene: 45657589

Centisome position: 49.05

GC content: 33.72

Gene sequence:

>519_bases
TTGAAAAAAATAGCAATTCCAATTTTCATTTTTTACTTTCTAATCTCGATAAATCAATGCAGACGAACCTTCCATATAGG
CATTTTAAATGATTCGAAATACGAAATCACATTGACATTAAAATTGAAGACACCCGTTTCTAAATCGGAATTTCTAACTA
CAATTCTTGAAATCCCTTCCGATGCCGATAATCATCACCTTTATTCTACTATATATTTTCGCGTGCCCGCGAATGATTCC
AATCGTTTAGATAGTAGCAAATTAGAGGCAATCTCTTCGAATGAAATTAGTTACAATCATACGTTAGGCGAAATTAAATT
GAAACTGCAACCCAGGTTTGCCTATTTTTTTCTCAATTCCCATTCGTCTAACGAACATTATGTGCATTCGATCGAAAATC
GTTTTTCCGAAATTAGAATCGATTCCCAAAATACTTCTAGCATTCTTAGGCAAAACGTAATACGCTCTCTTTTCCCCTAC
AATGAGAACTGTGAATGTTTTCTTTGGATAATCAAGTAA

Upstream 100 bases:

>100_bases
GTTTCTTTTCTCAGAAGTTCTTGAAAAACGAGAGCTTACGGAATAACGTTAGACGTCCTTTTGTGATTTTGATCCTTCCA
TAAAAAAGGAAACGATTCTC

Downstream 100 bases:

>100_bases
AGGTAAAGAAATATGATTAAAAACAAATCATTTCTAGCATTTCTTATGATTTTTGTTTCTTTTGGTTGTGGATCCCGAGA
CACTTTCGAAACGATTCAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 172; Mature: 172

Protein sequence:

>172_residues
MKKIAIPIFIFYFLISINQCRRTFHIGILNDSKYEITLTLKLKTPVSKSEFLTTILEIPSDADNHHLYSTIYFRVPANDS
NRLDSSKLEAISSNEISYNHTLGEIKLKLQPRFAYFFLNSHSSNEHYVHSIENRFSEIRIDSQNTSSILRQNVIRSLFPY
NENCECFLWIIK

Sequences:

>Translated_172_residues
MKKIAIPIFIFYFLISINQCRRTFHIGILNDSKYEITLTLKLKTPVSKSEFLTTILEIPSDADNHHLYSTIYFRVPANDS
NRLDSSKLEAISSNEISYNHTLGEIKLKLQPRFAYFFLNSHSSNEHYVHSIENRFSEIRIDSQNTSSILRQNVIRSLFPY
NENCECFLWIIK
>Mature_172_residues
MKKIAIPIFIFYFLISINQCRRTFHIGILNDSKYEITLTLKLKTPVSKSEFLTTILEIPSDADNHHLYSTIYFRVPANDS
NRLDSSKLEAISSNEISYNHTLGEIKLKLQPRFAYFFLNSHSSNEHYVHSIENRFSEIRIDSQNTSSILRQNVIRSLFPY
NENCECFLWIIK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20185; Mature: 20185

Theoretical pI: Translated: 8.46; Mature: 8.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKIAIPIFIFYFLISINQCRRTFHIGILNDSKYEITLTLKLKTPVSKSEFLTTILEIPS
CCEEHHHHHHHHHHHHHHHCCEEEEEEEECCCEEEEEEEEEEECCCCHHHHHHHHHHCCC
DADNHHLYSTIYFRVPANDSNRLDSSKLEAISSNEISYNHTLGEIKLKLQPRFAYFFLNS
CCCCCEEEEEEEEEECCCCCCCCCCHHHHEECCCCEEECEEEEEEEEEEECEEEEEEEEC
HSSNEHYVHSIENRFSEIRIDSQNTSSILRQNVIRSLFPYNENCECFLWIIK
CCCCCHHHHHHHCCHHHEEECCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEC
>Mature Secondary Structure
MKKIAIPIFIFYFLISINQCRRTFHIGILNDSKYEITLTLKLKTPVSKSEFLTTILEIPS
CCEEHHHHHHHHHHHHHHHCCEEEEEEEECCCEEEEEEEEEEECCCCHHHHHHHHHHCCC
DADNHHLYSTIYFRVPANDSNRLDSSKLEAISSNEISYNHTLGEIKLKLQPRFAYFFLNS
CCCCCEEEEEEEEEECCCCCCCCCCHHHHEECCCCEEECEEEEEEEEEEECEEEEEEEEC
HSSNEHYVHSIENRFSEIRIDSQNTSSILRQNVIRSLFPYNENCECFLWIIK
CCCCCHHHHHHHCCHHHEEECCCCHHHHHHHHHHHHHCCCCCCCEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA