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The map label for this gene is 45657563

Identifier: 45657563

GI number: 45657563

Start: 2062735

End: 2063931

Strand: Reverse

Name: 45657563

Synonym: LIC11697

Alternate gene names: NA

Gene position: 2063931-2062735 (Counterclockwise)

Preceding gene: 45657564

Following gene: 45657557

Centisome position: 48.25

GC content: 33.42

Gene sequence:

>1197_bases
ATGTTAAGCGAAGAAGAATCATCGGAACTTTTCAGGACAATTTCCGAAATTAAAAAAAACGGAATTGAGTCTGAAGTAAT
TGAACGGAAATTTAGAACGATTCGTATTATTTTTTCGATCGGATTTTTTACATTCCTAGGCACTGTTTCCGCTCTTACTC
TAACCAATAAAATCTTTAAATTAGAAGCTACCGTAGAAAAACAAACACTTCATATTACCGATTTGGAAGAAACGTTAACC
TCTCTTCGTCTTGAAGAACAACAAAAAGAAGAAGAACTTCTGAAATTCAAATCGGATCTTTATGAGACAATCCCGGATGG
AGATTTATCCGATCAGGTTGCACAAAACAAAACAAACTTAGAAACACTTGCGGGTTCCGAAATTGGAAAAAATATCAATC
GGGGAAATACACGCTTTAAAGAAATTGCACTTACATTTGATCTTGGAACCGGAGAAGACTTAAAACTGATTTATGAATAC
CTTTCTCAATTTCCAATTAAAATTACTTTGTTTGTTTCAAACGAAAATCCAGCTCTTAAAAATGGTTCCTTCTTTAGTAA
TACCAATTTATATTATTTAAAAAAATTATCGGAATTAGGAAATAGAGTCGTTTTTGGAAATCATACTTGGAGTCATTATA
ATATTCCAAGAAGTTTATATGAAACCTCTCTTCACAAAAGAGCTCTACTAAGTTACATTTCCAATGAAGTTCCAGATGCA
AATTTTCTCCAACAAGAAATGAAAATGGTAGAAGAGAAATTCCAATCTATTACCGGGAAACCATTGACTAAATACTACAG
GCTTCCTTATGGAGGGTTTGACCCTTTGGTGATACAAACCTTCGGAAGATTAGGTTACACACACCATATTTTTTGGAGCA
ACAACTCGGAGGGCTCTTTAGATATTCCAGATTTTGTATATAAGAAATTTATTTATAAAAAAGATCCTCAAACCGGAAAA
ACCAGAATCGTCCCCAATCCAAACTATAAAACCAAAGCAGAAACTCTCGATTTTCTATATCGTTGGGAAGAAGCAGACAA
AAATGGTATGAATGGAGCAATCATTTTAATGCACTTGGGTTCTCCTAGACAATCAGAAAAACTGATTTACATTCTACCAG
ATTTTATTCAAGAAATGCTTTCTAAAGGATATAGTTTTGTAACCGTTCCGGAAATCATTAATGATCGCCAAGATTAA

Upstream 100 bases:

>100_bases
AGAATATCTAGTGAGGCAGGGGAAAAAAGGGAAATTTTTAAAAATTATTTCCTAAAAATGATTTGAAGGATTCGAAATTC
CTTATTTCAATCGAGTCTTT

Downstream 100 bases:

>100_bases
TTCTACTTACTGGCATTCAAAGTAAATCTATGTTAATTTTCTAAAAATAGATAGAATTTCCTGAAATCATTTACAGTAAC
AACTTTTTATCGGGAAACTT

Product: xylanase/chitin deacetylase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 398; Mature: 398

Protein sequence:

>398_residues
MLSEEESSELFRTISEIKKNGIESEVIERKFRTIRIIFSIGFFTFLGTVSALTLTNKIFKLEATVEKQTLHITDLEETLT
SLRLEEQQKEEELLKFKSDLYETIPDGDLSDQVAQNKTNLETLAGSEIGKNINRGNTRFKEIALTFDLGTGEDLKLIYEY
LSQFPIKITLFVSNENPALKNGSFFSNTNLYYLKKLSELGNRVVFGNHTWSHYNIPRSLYETSLHKRALLSYISNEVPDA
NFLQQEMKMVEEKFQSITGKPLTKYYRLPYGGFDPLVIQTFGRLGYTHHIFWSNNSEGSLDIPDFVYKKFIYKKDPQTGK
TRIVPNPNYKTKAETLDFLYRWEEADKNGMNGAIILMHLGSPRQSEKLIYILPDFIQEMLSKGYSFVTVPEIINDRQD

Sequences:

>Translated_398_residues
MLSEEESSELFRTISEIKKNGIESEVIERKFRTIRIIFSIGFFTFLGTVSALTLTNKIFKLEATVEKQTLHITDLEETLT
SLRLEEQQKEEELLKFKSDLYETIPDGDLSDQVAQNKTNLETLAGSEIGKNINRGNTRFKEIALTFDLGTGEDLKLIYEY
LSQFPIKITLFVSNENPALKNGSFFSNTNLYYLKKLSELGNRVVFGNHTWSHYNIPRSLYETSLHKRALLSYISNEVPDA
NFLQQEMKMVEEKFQSITGKPLTKYYRLPYGGFDPLVIQTFGRLGYTHHIFWSNNSEGSLDIPDFVYKKFIYKKDPQTGK
TRIVPNPNYKTKAETLDFLYRWEEADKNGMNGAIILMHLGSPRQSEKLIYILPDFIQEMLSKGYSFVTVPEIINDRQD
>Mature_398_residues
MLSEEESSELFRTISEIKKNGIESEVIERKFRTIRIIFSIGFFTFLGTVSALTLTNKIFKLEATVEKQTLHITDLEETLT
SLRLEEQQKEEELLKFKSDLYETIPDGDLSDQVAQNKTNLETLAGSEIGKNINRGNTRFKEIALTFDLGTGEDLKLIYEY
LSQFPIKITLFVSNENPALKNGSFFSNTNLYYLKKLSELGNRVVFGNHTWSHYNIPRSLYETSLHKRALLSYISNEVPDA
NFLQQEMKMVEEKFQSITGKPLTKYYRLPYGGFDPLVIQTFGRLGYTHHIFWSNNSEGSLDIPDFVYKKFIYKKDPQTGK
TRIVPNPNYKTKAETLDFLYRWEEADKNGMNGAIILMHLGSPRQSEKLIYILPDFIQEMLSKGYSFVTVPEIINDRQD

Specific function: Unknown

COG id: COG0726

COG function: function code G; Predicted xylanase/chitin deacetylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46018; Mature: 46018

Theoretical pI: Translated: 5.98; Mature: 5.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLSEEESSELFRTISEIKKNGIESEVIERKFRTIRIIFSIGFFTFLGTVSALTLTNKIFK
CCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE
LEATVEKQTLHITDLEETLTSLRLEEQQKEEELLKFKSDLYETIPDGDLSDQVAQNKTNL
EEEECCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCH
ETLAGSEIGKNINRGNTRFKEIALTFDLGTGEDLKLIYEYLSQFPIKITLFVSNENPALK
HHHHCHHHHCCCCCCCCEEEEEEEEEECCCCCHHHHHHHHHHCCCEEEEEEEECCCCCCC
NGSFFSNTNLYYLKKLSELGNRVVFGNHTWSHYNIPRSLYETSLHKRALLSYISNEVPDA
CCCEECCCCHHHHHHHHHHCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCH
NFLQQEMKMVEEKFQSITGKPLTKYYRLPYGGFDPLVIQTFGRLGYTHHIFWSNNSEGSL
HHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCHHHHHHHHHCCCEEEEEECCCCCCCC
DIPDFVYKKFIYKKDPQTGKTRIVPNPNYKTKAETLDFLYRWEEADKNGMNGAIILMHLG
CCHHHHHHHHHHCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECC
SPRQSEKLIYILPDFIQEMLSKGYSFVTVPEIINDRQD
CCCCCCCEEEECHHHHHHHHHCCCCEEECHHHHCCCCC
>Mature Secondary Structure
MLSEEESSELFRTISEIKKNGIESEVIERKFRTIRIIFSIGFFTFLGTVSALTLTNKIFK
CCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE
LEATVEKQTLHITDLEETLTSLRLEEQQKEEELLKFKSDLYETIPDGDLSDQVAQNKTNL
EEEECCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCH
ETLAGSEIGKNINRGNTRFKEIALTFDLGTGEDLKLIYEYLSQFPIKITLFVSNENPALK
HHHHCHHHHCCCCCCCCEEEEEEEEEECCCCCHHHHHHHHHHCCCEEEEEEEECCCCCCC
NGSFFSNTNLYYLKKLSELGNRVVFGNHTWSHYNIPRSLYETSLHKRALLSYISNEVPDA
CCCEECCCCHHHHHHHHHHCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCH
NFLQQEMKMVEEKFQSITGKPLTKYYRLPYGGFDPLVIQTFGRLGYTHHIFWSNNSEGSL
HHHHHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCHHHHHHHHHCCCEEEEEECCCCCCCC
DIPDFVYKKFIYKKDPQTGKTRIVPNPNYKTKAETLDFLYRWEEADKNGMNGAIILMHLG
CCHHHHHHHHHHCCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECC
SPRQSEKLIYILPDFIQEMLSKGYSFVTVPEIINDRQD
CCCCCCCEEEECHHHHHHHHHCCCCEEECHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA