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The map label for this gene is 45657545

Identifier: 45657545

GI number: 45657545

Start: 2041033

End: 2041524

Strand: Reverse

Name: 45657545

Synonym: LIC11677

Alternate gene names: NA

Gene position: 2041524-2041033 (Counterclockwise)

Preceding gene: 45657546

Following gene: 45657544

Centisome position: 47.73

GC content: 35.16

Gene sequence:

>492_bases
ATGAAATCTGTAGAAACCTGGTTAGACGAGTACGGGGAAAGTCATCAAAATCCTATCAATAAAAACATACATTGGATTTG
TGTTCCTTCGATTTATTTTACGGTCGTTGGACTTCTTTGGGCAATCCCAGTTCCTTCAATTTTTCTATCCGTACCTTACT
TAAACTTTGCAACAATCGCTCTTGTTTTGGCGCTTGTGTTTTACATACGACTTTCAGCTACATTGGCTTTTGGAATGTTG
GTTTTAAGTTCTTTGATGATGTATCTGATCATTCTTTTGCAAAGAACTCTTCTACCAATTATGATTGGAAGTTATTCTTA
CGGAATTTTGGAACTTTCAATTACGATTTTTGTTTTGGCCTGGATCGGACAATTTATTGGGCACAAAATCGAAGGTAAAA
AACCTTCTTTCTTTAAGGATCTTCAATTTTTGATGATCGGCCCAATCTGGTTACTTGGATTTATCTATAAAAAGATGAAA
ATCGCCTATTGA

Upstream 100 bases:

>100_bases
CGAAATTGCGACTATTTTATATTTTATTCGAGAAGTTTGATAAAAAACACTTGCGGTCCTATTTCGAACGTTTAAAATTT
TTAAATCTAAAGGAGTTGTT

Downstream 100 bases:

>100_bases
TCGTTCCAATTTAGTGCAAAAAAAAATCGATATTCAGCATTATTTTGTACACTACAAATTATCAAAAAAAATATCCCGAG
GGAATTCGATGCCTAAGATA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 163; Mature: 163

Protein sequence:

>163_residues
MKSVETWLDEYGESHQNPINKNIHWICVPSIYFTVVGLLWAIPVPSIFLSVPYLNFATIALVLALVFYIRLSATLAFGML
VLSSLMMYLIILLQRTLLPIMIGSYSYGILELSITIFVLAWIGQFIGHKIEGKKPSFFKDLQFLMIGPIWLLGFIYKKMK
IAY

Sequences:

>Translated_163_residues
MKSVETWLDEYGESHQNPINKNIHWICVPSIYFTVVGLLWAIPVPSIFLSVPYLNFATIALVLALVFYIRLSATLAFGML
VLSSLMMYLIILLQRTLLPIMIGSYSYGILELSITIFVLAWIGQFIGHKIEGKKPSFFKDLQFLMIGPIWLLGFIYKKMK
IAY
>Mature_163_residues
MKSVETWLDEYGESHQNPINKNIHWICVPSIYFTVVGLLWAIPVPSIFLSVPYLNFATIALVLALVFYIRLSATLAFGML
VLSSLMMYLIILLQRTLLPIMIGSYSYGILELSITIFVLAWIGQFIGHKIEGKKPSFFKDLQFLMIGPIWLLGFIYKKMK
IAY

Specific function: Unknown

COG id: COG4539

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18658; Mature: 18658

Theoretical pI: Translated: 9.49; Mature: 9.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSVETWLDEYGESHQNPINKNIHWICVPSIYFTVVGLLWAIPVPSIFLSVPYLNFATIA
CCHHHHHHHHHCHHCCCCCCCCCEEEEHHHHHHHHHHHHHHHCHHHHHHHCCCHHHHHHH
LVLALVFYIRLSATLAFGMLVLSSLMMYLIILLQRTLLPIMIGSYSYGILELSITIFVLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
WIGQFIGHKIEGKKPSFFKDLQFLMIGPIWLLGFIYKKMKIAY
HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKSVETWLDEYGESHQNPINKNIHWICVPSIYFTVVGLLWAIPVPSIFLSVPYLNFATIA
CCHHHHHHHHHCHHCCCCCCCCCEEEEHHHHHHHHHHHHHHHCHHHHHHHCCCHHHHHHH
LVLALVFYIRLSATLAFGMLVLSSLMMYLIILLQRTLLPIMIGSYSYGILELSITIFVLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
WIGQFIGHKIEGKKPSFFKDLQFLMIGPIWLLGFIYKKMKIAY
HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA