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The map label for this gene is 45657546

Identifier: 45657546

GI number: 45657546

Start: 2041811

End: 2042638

Strand: Reverse

Name: 45657546

Synonym: LIC11678

Alternate gene names: NA

Gene position: 2042638-2041811 (Counterclockwise)

Preceding gene: 45657549

Following gene: 45657545

Centisome position: 47.76

GC content: 35.02

Gene sequence:

>828_bases
ATGGCTGATTCCGAACGTTTTCCGGTCAGGATCAACAAATTTAACATCTGGCATTTTTATCTTTGGCTTCGCGCGCTTCC
TGGTTCTGGAAGAGAAGTCTTTCTACTTTCTTTCGCCGTTTTAGACATTCTTCTTCTTTTAATTTACAATTCGTATAAGG
AAATTCTTCCAAAAGAATTATACGTCTATGTGATTGGTTTTGATTTTTTTGTCTTAACCATTTGGATTCTGGAACTCGTT
TCAAAATTCAGAAAATCAAAAGACCCAAGCTCCTATTTTTCTATGAATTGGTATGAAATTATAGGAGTAGTTCCATTTTA
TTTTCTACGTCCTTTTTTGATTCTAAGGGGAATCAAATTACTGATCGCATTCTACAAGTTAGGTCAATCCGGACAAAACC
TAAGCGACATTGTCACTAGAGAAATTACTTTCCGATTCAGAGACGTGATCGTAGATACAATTGCGGACGCAGTTTTTTTA
CATTCTCTGGAAAGAGTGGAAGAAGTGATGATTCGCTTAGACTACAATGGACTCGCCAAAAAAGCTTTTGAACTTCATCA
AGATCGATTCCACGCAAAGGTAAATGAATCTCTCCAATCTAAATTTTTACTAGGAGAATTATCTAAAATTCCGTTCATGG
GAGAAATTTCTAAAAGATTAGGAGAAGATATAAGTTCTATGATTACCGAAATTTTAGAAAACGAAGTTACCGGAGAAATC
ATGAAACAAGTCACGGAAGGAATTTTGAAAGAAATGGCAAATCACGTAAAAAAATTACCCATCGAAAGAATTACAAAACC
TTTGGAAACAGAACCTTCTGAAGAGTAA

Upstream 100 bases:

>100_bases
AACCGTCAATCGCCACTTGAAATAACATGGAATTGTAGTGACCAAAATCCCATTCTCTTAAATACTGTAAACCATCCTTT
CTTGAGAGATTATAAGTAAA

Downstream 100 bases:

>100_bases
AAAAATAAACGGTCAAATTCCTCGTTAAATCAACGTTTGGCGAACACGATCCAATTAAAGATTTATTTTATAGAGGTTTT
CTCCGCATTTTATCTCAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 275; Mature: 274

Protein sequence:

>275_residues
MADSERFPVRINKFNIWHFYLWLRALPGSGREVFLLSFAVLDILLLLIYNSYKEILPKELYVYVIGFDFFVLTIWILELV
SKFRKSKDPSSYFSMNWYEIIGVVPFYFLRPFLILRGIKLLIAFYKLGQSGQNLSDIVTREITFRFRDVIVDTIADAVFL
HSLERVEEVMIRLDYNGLAKKAFELHQDRFHAKVNESLQSKFLLGELSKIPFMGEISKRLGEDISSMITEILENEVTGEI
MKQVTEGILKEMANHVKKLPIERITKPLETEPSEE

Sequences:

>Translated_275_residues
MADSERFPVRINKFNIWHFYLWLRALPGSGREVFLLSFAVLDILLLLIYNSYKEILPKELYVYVIGFDFFVLTIWILELV
SKFRKSKDPSSYFSMNWYEIIGVVPFYFLRPFLILRGIKLLIAFYKLGQSGQNLSDIVTREITFRFRDVIVDTIADAVFL
HSLERVEEVMIRLDYNGLAKKAFELHQDRFHAKVNESLQSKFLLGELSKIPFMGEISKRLGEDISSMITEILENEVTGEI
MKQVTEGILKEMANHVKKLPIERITKPLETEPSEE
>Mature_274_residues
ADSERFPVRINKFNIWHFYLWLRALPGSGREVFLLSFAVLDILLLLIYNSYKEILPKELYVYVIGFDFFVLTIWILELVS
KFRKSKDPSSYFSMNWYEIIGVVPFYFLRPFLILRGIKLLIAFYKLGQSGQNLSDIVTREITFRFRDVIVDTIADAVFLH
SLERVEEVMIRLDYNGLAKKAFELHQDRFHAKVNESLQSKFLLGELSKIPFMGEISKRLGEDISSMITEILENEVTGEIM
KQVTEGILKEMANHVKKLPIERITKPLETEPSEE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32159; Mature: 32028

Theoretical pI: Translated: 6.38; Mature: 6.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADSERFPVRINKFNIWHFYLWLRALPGSGREVFLLSFAVLDILLLLIYNSYKEILPKEL
CCCCCCCCEEEEEEHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
YVYVIGFDFFVLTIWILELVSKFRKSKDPSSYFSMNWYEIIGVVPFYFLRPFLILRGIKL
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
LIAFYKLGQSGQNLSDIVTREITFRFRDVIVDTIADAVFLHSLERVEEVMIRLDYNGLAK
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
KAFELHQDRFHAKVNESLQSKFLLGELSKIPFMGEISKRLGEDISSMITEILENEVTGEI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MKQVTEGILKEMANHVKKLPIERITKPLETEPSEE
HHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCC
>Mature Secondary Structure 
ADSERFPVRINKFNIWHFYLWLRALPGSGREVFLLSFAVLDILLLLIYNSYKEILPKEL
CCCCCCCEEEEEEHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
YVYVIGFDFFVLTIWILELVSKFRKSKDPSSYFSMNWYEIIGVVPFYFLRPFLILRGIKL
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
LIAFYKLGQSGQNLSDIVTREITFRFRDVIVDTIADAVFLHSLERVEEVMIRLDYNGLAK
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH
KAFELHQDRFHAKVNESLQSKFLLGELSKIPFMGEISKRLGEDISSMITEILENEVTGEI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MKQVTEGILKEMANHVKKLPIERITKPLETEPSEE
HHHHHHHHHHHHHHHHHHCCHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA