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The map label for this gene is ubiA

Identifier: 45657482

GI number: 45657482

Start: 1971616

End: 1972548

Strand: Reverse

Name: ubiA

Synonym: LIC11610

Alternate gene names: 45657482

Gene position: 1972548-1971616 (Counterclockwise)

Preceding gene: 45657489

Following gene: 45657481

Centisome position: 46.12

GC content: 35.16

Gene sequence:

>933_bases
ATGCAAGAAAAGAATTTTGGAATTTTAAAGGTCATGAATCAAACTCTAACATCTCTGAAGCAATACGGAAGTCTTATTAA
GTTTTCTCATACATTATTCGCGCTCCCTTTTGCAGGAATTGCATTTGTTCTATCCTTTCTAAAAACACAGGGGCGATCCA
TATCGGACTGGGTTATACTTTCGATTCTAATTTTGATTTCCATGATATTCGCAAGATCCGCAGCTATGGGTTTTAATCGC
ATCGTAGATACAGATATAGACTTAAAAAATGAGCGTACTCGGGATAGAGAAATTCCAGCAGGTAAAATTTCAAAACGTTC
CGCGATTTTGTTTGTTGTTTTATCTTCTTGCGGATTTTTAATCGTGAGTTGGTTTATCAATCCGATGGCGTTTCTATTTT
CCTTTCCTACCTTAATCATTCTTTTAGGATATTCTTTGGCAAAACGATTCACTTGGTTTTGTCATTTCATTTTAGGTTTT
TCGATCGGACTTGCACCACTTGCAACTTGGGTGGCAGTTCGGGAAGAAATCGTTTGGGAACCAATTCTTTGGACAATTGG
TCTTGCATTCAATCTGGCTGGGTTTGATATTCTTTACGCTCTACAAGACCAAGAGTTCGATCAAAAAGAAGGGCTTTATT
CCATACCCGCAAAGTTCGGAAAAAAAATTTCTCTTAGAATTGCAATCGCGAGTCATATCCTTTGTATCGGATTCTTATTT
ATGGCCGGTTTTGCTTCCGGGCTTGGATTTATATTTATAATATTTTTAATAGTTACCTCATATTTTCTTTTTCAAGAACA
CCAAATCGTTAGAACTTCTGGAAATAATTTTTTTCCTCCAAAATTTTACCAAATTCATTCTTATATTTCTTTGATCCTGT
TTGCAGGATTGTTATTCGATCGAGTTTTCTATTTTTTGTTTTTAGTATTCTAA

Upstream 100 bases:

>100_bases
TTTGTAGATACAGAAGGATTTGTTAAAACGACTGTCATAGACGTATCCTTTTTTAAAGGGCAGAAAAAATCATCGCTTTT
TAGACTTTCTTTTCAATTTT

Downstream 100 bases:

>100_bases
CCGTTCTTGGTTAGATTTCGCTTAGCAAGCGTTTCAAAACTATAAAAAAGACTACATCGTTTTATATTGGGAATCTTTAT
AAAATTTAAAATCTTGTTCC

Product: prenyltransferase

Products: NA

Alternate protein names: 4-HB polyprenyltransferase [H]

Number of amino acids: Translated: 310; Mature: 310

Protein sequence:

>310_residues
MQEKNFGILKVMNQTLTSLKQYGSLIKFSHTLFALPFAGIAFVLSFLKTQGRSISDWVILSILILISMIFARSAAMGFNR
IVDTDIDLKNERTRDREIPAGKISKRSAILFVVLSSCGFLIVSWFINPMAFLFSFPTLIILLGYSLAKRFTWFCHFILGF
SIGLAPLATWVAVREEIVWEPILWTIGLAFNLAGFDILYALQDQEFDQKEGLYSIPAKFGKKISLRIAIASHILCIGFLF
MAGFASGLGFIFIIFLIVTSYFLFQEHQIVRTSGNNFFPPKFYQIHSYISLILFAGLLFDRVFYFLFLVF

Sequences:

>Translated_310_residues
MQEKNFGILKVMNQTLTSLKQYGSLIKFSHTLFALPFAGIAFVLSFLKTQGRSISDWVILSILILISMIFARSAAMGFNR
IVDTDIDLKNERTRDREIPAGKISKRSAILFVVLSSCGFLIVSWFINPMAFLFSFPTLIILLGYSLAKRFTWFCHFILGF
SIGLAPLATWVAVREEIVWEPILWTIGLAFNLAGFDILYALQDQEFDQKEGLYSIPAKFGKKISLRIAIASHILCIGFLF
MAGFASGLGFIFIIFLIVTSYFLFQEHQIVRTSGNNFFPPKFYQIHSYISLILFAGLLFDRVFYFLFLVF
>Mature_310_residues
MQEKNFGILKVMNQTLTSLKQYGSLIKFSHTLFALPFAGIAFVLSFLKTQGRSISDWVILSILILISMIFARSAAMGFNR
IVDTDIDLKNERTRDREIPAGKISKRSAILFVVLSSCGFLIVSWFINPMAFLFSFPTLIILLGYSLAKRFTWFCHFILGF
SIGLAPLATWVAVREEIVWEPILWTIGLAFNLAGFDILYALQDQEFDQKEGLYSIPAKFGKKISLRIAIASHILCIGFLF
MAGFASGLGFIFIIFLIVTSYFLFQEHQIVRTSGNNFFPPKFYQIHSYISLILFAGLLFDRVFYFLFLVF

Specific function: Synthesis of 3-octaprenyl-4-hydroxybenzoate [H]

COG id: COG0382

COG function: function code H; 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ubiA prenyltransferase family [H]

Homologues:

Organism=Escherichia coli, GI1790473, Length=235, Percent_Identity=28.936170212766, Blast_Score=69, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI17553718, Length=240, Percent_Identity=24.5833333333333, Blast_Score=74, Evalue=8e-14,
Organism=Drosophila melanogaster, GI21355567, Length=248, Percent_Identity=27.0161290322581, Blast_Score=72, Evalue=5e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006370
- InterPro:   IPR000537 [H]

Pfam domain/function: PF01040 UbiA [H]

EC number: 2.5.1.-

Molecular weight: Translated: 35320; Mature: 35320

Theoretical pI: Translated: 9.83; Mature: 9.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQEKNFGILKVMNQTLTSLKQYGSLIKFSHTLFALPFAGIAFVLSFLKTQGRSISDWVIL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
SILILISMIFARSAAMGFNRIVDTDIDLKNERTRDREIPAGKISKRSAILFVVLSSCGFL
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
IVSWFINPMAFLFSFPTLIILLGYSLAKRFTWFCHFILGFSIGLAPLATWVAVREEIVWE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PILWTIGLAFNLAGFDILYALQDQEFDQKEGLYSIPAKFGKKISLRIAIASHILCIGFLF
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCEECHHHHCCEEEEEHHHHHHHHHHHHHH
MAGFASGLGFIFIIFLIVTSYFLFQEHQIVRTSGNNFFPPKFYQIHSYISLILFAGLLFD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHH
RVFYFLFLVF
HHHHHHHHHC
>Mature Secondary Structure
MQEKNFGILKVMNQTLTSLKQYGSLIKFSHTLFALPFAGIAFVLSFLKTQGRSISDWVIL
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
SILILISMIFARSAAMGFNRIVDTDIDLKNERTRDREIPAGKISKRSAILFVVLSSCGFL
HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
IVSWFINPMAFLFSFPTLIILLGYSLAKRFTWFCHFILGFSIGLAPLATWVAVREEIVWE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PILWTIGLAFNLAGFDILYALQDQEFDQKEGLYSIPAKFGKKISLRIAIASHILCIGFLF
HHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCEECHHHHCCEEEEEHHHHHHHHHHHHHH
MAGFASGLGFIFIIFLIVTSYFLFQEHQIVRTSGNNFFPPKFYQIHSYISLILFAGLLFD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHHHHHH
RVFYFLFLVF
HHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA