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The map label for this gene is ubiX

Identifier: 45657481

GI number: 45657481

Start: 1969401

End: 1970015

Strand: Reverse

Name: ubiX

Synonym: LIC11609

Alternate gene names: 45657481

Gene position: 1970015-1969401 (Counterclockwise)

Preceding gene: 45657482

Following gene: 45657476

Centisome position: 46.06

GC content: 38.54

Gene sequence:

>615_bases
ATGAAACTTGTATTAGGAATAGCAGGAGCCAGCGGCTCCATTTACGCGGAAAGATTTATCAAAGCACTTTTTACAATCGA
AGGAACTACTTTTTTAGTCTGCAGTAATGCGTCTCTTAGAGTTTTTAGAGAGGAAATGGAATGTAAGGTCTCTTCGTCAA
AAGAATTACTAGATTTTATCGTTTCTAAATATAAGATCCATACCACTCGTCATCGATTTGAAATCCGCAGTTTTACAGAC
ATAGGAGCAGACATAGCCTCCGGTTCCAATTTTTGGAACGCGATGGTAATCCTTCCCTGTTCCATGAAAATGATCGCTTC
AATTAACGCCGGTTTAACGGAAAACCTAATTGAAAGAGCCGCCGATGTCACTTTAAAAGAGAGAAGAAACCTTATAATAG
TTCCAAGGGAAACACCTTACAATCGAATTCATCTGAAAAATATGTTAGAACTTCACGACGCAGGTGGAATTATTCTACCT
GCTTCTCCGGGATTTTATCAGTTGCCTAAAACTTTGGAGGACTTAGGAGATTTCATCAGCGAAAAAGTTTTCAAACTTTT
GGGTATGGAACTAAATCTATACCCGCCATGGACTCCTAAAAATACAGAGGAATAA

Upstream 100 bases:

>100_bases
ACTCAAATTTTATACAAATCAATAGGACAAAATTCTAAAAACTGAAATTGAAAATCTACTTCAAAGAATTTTAAAATTTC
TGCATATATTAAGAGATAAA

Downstream 100 bases:

>100_bases
TTCTTATTAGGCGAAGTATTCTATATCGTGAATTTTCTTCTTAAGTGTAGATGCGTCTTCGTAGTTTTCCTTTGAAATCG
CATTGAACTTTTGAAGATAA

Product: 3-octaprenyl-4-hydroxybenzoate carboxylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 204; Mature: 204

Protein sequence:

>204_residues
MKLVLGIAGASGSIYAERFIKALFTIEGTTFLVCSNASLRVFREEMECKVSSSKELLDFIVSKYKIHTTRHRFEIRSFTD
IGADIASGSNFWNAMVILPCSMKMIASINAGLTENLIERAADVTLKERRNLIIVPRETPYNRIHLKNMLELHDAGGIILP
ASPGFYQLPKTLEDLGDFISEKVFKLLGMELNLYPPWTPKNTEE

Sequences:

>Translated_204_residues
MKLVLGIAGASGSIYAERFIKALFTIEGTTFLVCSNASLRVFREEMECKVSSSKELLDFIVSKYKIHTTRHRFEIRSFTD
IGADIASGSNFWNAMVILPCSMKMIASINAGLTENLIERAADVTLKERRNLIIVPRETPYNRIHLKNMLELHDAGGIILP
ASPGFYQLPKTLEDLGDFISEKVFKLLGMELNLYPPWTPKNTEE
>Mature_204_residues
MKLVLGIAGASGSIYAERFIKALFTIEGTTFLVCSNASLRVFREEMECKVSSSKELLDFIVSKYKIHTTRHRFEIRSFTD
IGADIASGSNFWNAMVILPCSMKMIASINAGLTENLIERAADVTLKERRNLIIVPRETPYNRIHLKNMLELHDAGGIILP
ASPGFYQLPKTLEDLGDFISEKVFKLLGMELNLYPPWTPKNTEE

Specific function: Unknown

COG id: COG0163

COG function: function code H; 3-polyprenyl-4-hydroxybenzoate decarboxylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polyprenyl p-hydroxybenzoate / phenylacrylic acid decarboxylases family [H]

Homologues:

Organism=Escherichia coli, GI1788650, Length=199, Percent_Identity=35.1758793969849, Blast_Score=115, Evalue=2e-27,
Organism=Saccharomyces cerevisiae, GI6320746, Length=196, Percent_Identity=36.734693877551, Blast_Score=125, Evalue=6e-30,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003382
- InterPro:   IPR004507 [H]

Pfam domain/function: PF02441 Flavoprotein [H]

EC number: 4.1.1.-

Molecular weight: Translated: 22974; Mature: 22974

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLVLGIAGASGSIYAERFIKALFTIEGTTFLVCSNASLRVFREEMECKVSSSKELLDFI
CEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHCCCHHHHHHHH
VSKYKIHTTRHRFEIRSFTDIGADIASGSNFWNAMVILPCSMKMIASINAGLTENLIERA
HHHHHHEEHHHEEEEHHHHHCCCHHCCCCCCEEEEEEECCCHHHHHHHCCCHHHHHHHHH
ADVTLKERRNLIIVPRETPYNRIHLKNMLELHDAGGIILPASPGFYQLPKTLEDLGDFIS
HCCHHHHCCCEEEEECCCCCCHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHH
EKVFKLLGMELNLYPPWTPKNTEE
HHHHHHHCCEEEECCCCCCCCCCC
>Mature Secondary Structure
MKLVLGIAGASGSIYAERFIKALFTIEGTTFLVCSNASLRVFREEMECKVSSSKELLDFI
CEEEEEEECCCCCHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHHHHHHCCCHHHHHHHH
VSKYKIHTTRHRFEIRSFTDIGADIASGSNFWNAMVILPCSMKMIASINAGLTENLIERA
HHHHHHEEHHHEEEEHHHHHCCCHHCCCCCCEEEEEEECCCHHHHHHHCCCHHHHHHHHH
ADVTLKERRNLIIVPRETPYNRIHLKNMLELHDAGGIILPASPGFYQLPKTLEDLGDFIS
HCCHHHHCCCEEEEECCCCCCHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHHHHH
EKVFKLLGMELNLYPPWTPKNTEE
HHHHHHHCCEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Carbon-Carbon Lyases; Carboxy-Lyases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11058132 [H]