Click here to switch to the map view.

The map label for this gene is 45657476

Identifier: 45657476

GI number: 45657476

Start: 1965580

End: 1966410

Strand: Reverse

Name: 45657476

Synonym: LIC11604

Alternate gene names: NA

Gene position: 1966410-1965580 (Counterclockwise)

Preceding gene: 45657481

Following gene: 45657475

Centisome position: 45.97

GC content: 36.34

Gene sequence:

>831_bases
ATGGCAAACCAGAAAACGGCGCTTAAAGGCAACGAGATTCTGAAAAATATCGAGGCTCTTAAGAAGAAAAAATTCTTTCA
TCTTGAACTCAAAGGTCTCACTAAGCCCACTCGAGACATTTTATCCGAACTCGTAAACGGAATTTTATCGGAGATAGGGG
CTAATCCGTTAGCAGGTTTTCATCTATTCAGCGGACTTATGGAGGCCTTACTCAATGCAATTAAAGCTAACATTCGACAT
ATCATTTTTAGAGATGAACTTCTTAAAAAATTAGAACAAGGAGAATCCAGTCGTCAAGACGCGGAGACACTTCTAGAGAT
TATCATGGAAACTTCTCTACTTCGAGACGCAATGCATCGTTATATCGTTCCAGAAAAAGTAAAAAAACAAGTACAAAGTG
TTCTATTTTTAGAAGATAAAATTCGCACAAAAAAGAAAGACCTTACAGAAACCGAAAAGACTTTTCTGACTGATGTTCGA
GCAAAGATCAAAAAGTACAACATGAATATTTCTTTGAAGATTCGTATTACTTCGGAAGATTTGAGTTTTCGAATTCGAAA
TGATTCCCCTATTCATCACCTAGATTTTCAGAGAATCCAAGAATCCAGACTCAAACACAAAGAACTTTTTGATCGTGGAA
ATTCTGCAGATTTCTTTCGCCCCGAATATCTAAATGAAAAAGAAAGTGCAGGTTTTGGAATTGCAATGATAGACGAGGGT
TTTTACTCCATCGGTCTCAATCCTCTTGATTTACTTACAATTACTTCTGGTGCAAGAACTACTACGGTTTATATGAAATA
TCCAATTACCGGATTGAAAATGGAGTTTTGA

Upstream 100 bases:

>100_bases
GATCAATTCAAAAATGTAGGATTTTGATTTCATAGTTTAAAACAAACTTGCGTAAAAGACTTTGTACATCAATGATACCT
AAAAAACTCGGCGGGGATAT

Downstream 100 bases:

>100_bases
TTTTATTATAAAATTGTTATTTATTTTCGAGAATTTCAACAAGAGAATTCAAAGATAAAATTCGGATTTATACATAAAAT
CTACATTAGTTATTCATAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 276; Mature: 275

Protein sequence:

>276_residues
MANQKTALKGNEILKNIEALKKKKFFHLELKGLTKPTRDILSELVNGILSEIGANPLAGFHLFSGLMEALLNAIKANIRH
IIFRDELLKKLEQGESSRQDAETLLEIIMETSLLRDAMHRYIVPEKVKKQVQSVLFLEDKIRTKKKDLTETEKTFLTDVR
AKIKKYNMNISLKIRITSEDLSFRIRNDSPIHHLDFQRIQESRLKHKELFDRGNSADFFRPEYLNEKESAGFGIAMIDEG
FYSIGLNPLDLLTITSGARTTTVYMKYPITGLKMEF

Sequences:

>Translated_276_residues
MANQKTALKGNEILKNIEALKKKKFFHLELKGLTKPTRDILSELVNGILSEIGANPLAGFHLFSGLMEALLNAIKANIRH
IIFRDELLKKLEQGESSRQDAETLLEIIMETSLLRDAMHRYIVPEKVKKQVQSVLFLEDKIRTKKKDLTETEKTFLTDVR
AKIKKYNMNISLKIRITSEDLSFRIRNDSPIHHLDFQRIQESRLKHKELFDRGNSADFFRPEYLNEKESAGFGIAMIDEG
FYSIGLNPLDLLTITSGARTTTVYMKYPITGLKMEF
>Mature_275_residues
ANQKTALKGNEILKNIEALKKKKFFHLELKGLTKPTRDILSELVNGILSEIGANPLAGFHLFSGLMEALLNAIKANIRHI
IFRDELLKKLEQGESSRQDAETLLEIIMETSLLRDAMHRYIVPEKVKKQVQSVLFLEDKIRTKKKDLTETEKTFLTDVRA
KIKKYNMNISLKIRITSEDLSFRIRNDSPIHHLDFQRIQESRLKHKELFDRGNSADFFRPEYLNEKESAGFGIAMIDEGF
YSIGLNPLDLLTITSGARTTTVYMKYPITGLKMEF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31774; Mature: 31643

Theoretical pI: Translated: 9.94; Mature: 9.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANQKTALKGNEILKNIEALKKKKFFHLELKGLTKPTRDILSELVNGILSEIGANPLAGF
CCCCCCCCCHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCHHH
HLFSGLMEALLNAIKANIRHIIFRDELLKKLEQGESSRQDAETLLEIIMETSLLRDAMHR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
YIVPEKVKKQVQSVLFLEDKIRTKKKDLTETEKTFLTDVRAKIKKYNMNISLKIRITSED
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCC
LSFRIRNDSPIHHLDFQRIQESRLKHKELFDRGNSADFFRPEYLNEKESAGFGIAMIDEG
CEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCCCCCCEEEECCC
FYSIGLNPLDLLTITSGARTTTVYMKYPITGLKMEF
HHHCCCCHHHEEEECCCCCEEEEEEEECCCCEEECC
>Mature Secondary Structure 
ANQKTALKGNEILKNIEALKKKKFFHLELKGLTKPTRDILSELVNGILSEIGANPLAGF
CCCCCCCCHHHHHHHHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCHHH
HLFSGLMEALLNAIKANIRHIIFRDELLKKLEQGESSRQDAETLLEIIMETSLLRDAMHR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHH
YIVPEKVKKQVQSVLFLEDKIRTKKKDLTETEKTFLTDVRAKIKKYNMNISLKIRITSED
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCC
LSFRIRNDSPIHHLDFQRIQESRLKHKELFDRGNSADFFRPEYLNEKESAGFGIAMIDEG
CEEEECCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCCCCCCCEEEECCC
FYSIGLNPLDLLTITSGARTTTVYMKYPITGLKMEF
HHHCCCCHHHEEEECCCCCEEEEEEEECCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA