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The map label for this gene is 45657358

Identifier: 45657358

GI number: 45657358

Start: 1830772

End: 1832490

Strand: Reverse

Name: 45657358

Synonym: LIC11483

Alternate gene names: NA

Gene position: 1832490-1830772 (Counterclockwise)

Preceding gene: 45657359

Following gene: 45657353

Centisome position: 42.84

GC content: 37.58

Gene sequence:

>1719_bases
ATGATCTCTACACTGAAACCCCGAATGAGCGATTCTCTCAAGAATTTCACGGATTCTCTCTTAAAAGATCTGGAAGAAAA
CGAAAACGGATTTTTTAAAATCGAAAACGAAGACGGTCTTGCCTATCTTTCCGTTTTTCCCGCAGGAAAAAAAGGAAAGC
CGGTAGATGCCAAAGAAATTTTAAGAAGAATTGAACTTTTTCAAATCACCGAAAGTTCCCCTATATCCATTAAAGAAATC
GCAAACAAATCGGATGGACTAACTCATCTGATTGGGAAATGGCCGGGTAAACCGGAAAGTTCTAGAATAGAAATAGAAAT
TTCAGAAGATCGGATGAAGGCCTTTTTAATCTTTCATCCGCCAAAATACGGCGGAAAAATTCTAAACTCCGAACAAATCC
AAGAATCGATCAGAGAAAGAGGAATTAAATTCGGAATTCGAAATGAAGTTTTAAATTTACTTTCCGAAGAACCTGAATAC
GGAAAAAAAATTCTGATCGCGGAAGGAGAATCACCGGTTCCAGGAAAAAACGGGGATATACGAGTTTTATTCATTCATCC
AGCAGCTCCCAATTTAGAAGAAGATGAATACGGAAGAGTAGATTTTAAGAATATTCAAATTATTCAAAGTGTCGCAAAAG
ATCAAAAACTTGCAGAAAAAATTTCTCCCCTTCCAGGCAAAGAAGGAAAAAACGTTTTAGGAGAAATACTTCCATACGAT
TCTGGGAAAGAAGCGGAATGGAAATTAGGACTCAACGTTAGACTCTCTTCAGACGGAATTTCAGTTCATTCTTTGATCAA
TGGAAGACCGATCCTAGATCGTCAAGGAACGATCCGAGTCGATGAAATCTGTCATTTAGAGAATGTTGACTTTTCCACTG
GAAACGTTAACTTTCCTGGAACCATCATAGTAGAAGGTTCAATTGCAGACGGTTTTACTTTAGAAACAGAAGGATCAATT
ATAGTCAAAAAATCAGTTGGAAAAGTTTTTCTCAAAGCTGGAGGTGACGTCGTTTTATCCGGAGGTTTTATGGGAAGAAA
TGGTGGCCTTATTGAATCGGGAGCTGACATTTACACACGTTTTGTAGAACAGGGAAGACTCATCGCAAAAAATACTATTT
TTATAGAAGAAGCATCTATGCATTCGGAATTGGTCGCAGGAGAGTCTGTCGTGATACGAGGAGGCAGAGGGGAATTGATC
GGTGGAAGTTGTGTCGCTGGTAAGTCCATCATCTGTACAAAGTTAGGCGCTATTGCCGAAACTAAAACTTCCGTATCCGT
AGGAATTCGTCCGGAACTTTTGGATGACTTAGAAAAACTACGTTTAGAAATCCAAAAAAATAAAGAAATACTTAAAAAAG
TAGAACAGAGTCTAATAAAACTAAATGAGGATTCTCAAAGAAGGCAACTTACGATCGAGGAAAAAGAAAGCCTCCCAAAA
CTTTCCGCAATTAAACAGAAATATTCAGGAATTCTAAATAACTTACTTGGACAGGAACAATCCATGATCATGGGATTTGA
ACCGGATAAGGATTCATATGTTGAAGTGGAACAAGAAATTTTTCCGGGTGTGGATATTTATCCAGGTAAAGGAAAAAATT
TTAAAGTACGTCTAAAAGAAATTCCAGGTCCTTCTTTTGTATTTTTAGGAAATGATGGAAATCCTCAAATTACAAAGGTA
AAACCGAAACGTCTGGGGATCCTGCAAGAAGAGAATTAA

Upstream 100 bases:

>100_bases
TAAACAAGATCACTAATATTATAAAATTCCATCATCGATAACGAAAAATCTTTCCAAACATTCAAGTTTTTTAGATAGAT
TTCGATTGTAAAAAGGAACA

Downstream 100 bases:

>100_bases
CCAACGTTAGTAACTATCCGTTTTTTTACTTAAAACTATATAATAAAATACCTAATTTTTTAAACTAAAATATAAGTTTA
TAATAAAAACCTAAAGTACT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 572; Mature: 572

Protein sequence:

>572_residues
MISTLKPRMSDSLKNFTDSLLKDLEENENGFFKIENEDGLAYLSVFPAGKKGKPVDAKEILRRIELFQITESSPISIKEI
ANKSDGLTHLIGKWPGKPESSRIEIEISEDRMKAFLIFHPPKYGGKILNSEQIQESIRERGIKFGIRNEVLNLLSEEPEY
GKKILIAEGESPVPGKNGDIRVLFIHPAAPNLEEDEYGRVDFKNIQIIQSVAKDQKLAEKISPLPGKEGKNVLGEILPYD
SGKEAEWKLGLNVRLSSDGISVHSLINGRPILDRQGTIRVDEICHLENVDFSTGNVNFPGTIIVEGSIADGFTLETEGSI
IVKKSVGKVFLKAGGDVVLSGGFMGRNGGLIESGADIYTRFVEQGRLIAKNTIFIEEASMHSELVAGESVVIRGGRGELI
GGSCVAGKSIICTKLGAIAETKTSVSVGIRPELLDDLEKLRLEIQKNKEILKKVEQSLIKLNEDSQRRQLTIEEKESLPK
LSAIKQKYSGILNNLLGQEQSMIMGFEPDKDSYVEVEQEIFPGVDIYPGKGKNFKVRLKEIPGPSFVFLGNDGNPQITKV
KPKRLGILQEEN

Sequences:

>Translated_572_residues
MISTLKPRMSDSLKNFTDSLLKDLEENENGFFKIENEDGLAYLSVFPAGKKGKPVDAKEILRRIELFQITESSPISIKEI
ANKSDGLTHLIGKWPGKPESSRIEIEISEDRMKAFLIFHPPKYGGKILNSEQIQESIRERGIKFGIRNEVLNLLSEEPEY
GKKILIAEGESPVPGKNGDIRVLFIHPAAPNLEEDEYGRVDFKNIQIIQSVAKDQKLAEKISPLPGKEGKNVLGEILPYD
SGKEAEWKLGLNVRLSSDGISVHSLINGRPILDRQGTIRVDEICHLENVDFSTGNVNFPGTIIVEGSIADGFTLETEGSI
IVKKSVGKVFLKAGGDVVLSGGFMGRNGGLIESGADIYTRFVEQGRLIAKNTIFIEEASMHSELVAGESVVIRGGRGELI
GGSCVAGKSIICTKLGAIAETKTSVSVGIRPELLDDLEKLRLEIQKNKEILKKVEQSLIKLNEDSQRRQLTIEEKESLPK
LSAIKQKYSGILNNLLGQEQSMIMGFEPDKDSYVEVEQEIFPGVDIYPGKGKNFKVRLKEIPGPSFVFLGNDGNPQITKV
KPKRLGILQEEN
>Mature_572_residues
MISTLKPRMSDSLKNFTDSLLKDLEENENGFFKIENEDGLAYLSVFPAGKKGKPVDAKEILRRIELFQITESSPISIKEI
ANKSDGLTHLIGKWPGKPESSRIEIEISEDRMKAFLIFHPPKYGGKILNSEQIQESIRERGIKFGIRNEVLNLLSEEPEY
GKKILIAEGESPVPGKNGDIRVLFIHPAAPNLEEDEYGRVDFKNIQIIQSVAKDQKLAEKISPLPGKEGKNVLGEILPYD
SGKEAEWKLGLNVRLSSDGISVHSLINGRPILDRQGTIRVDEICHLENVDFSTGNVNFPGTIIVEGSIADGFTLETEGSI
IVKKSVGKVFLKAGGDVVLSGGFMGRNGGLIESGADIYTRFVEQGRLIAKNTIFIEEASMHSELVAGESVVIRGGRGELI
GGSCVAGKSIICTKLGAIAETKTSVSVGIRPELLDDLEKLRLEIQKNKEILKKVEQSLIKLNEDSQRRQLTIEEKESLPK
LSAIKQKYSGILNNLLGQEQSMIMGFEPDKDSYVEVEQEIFPGVDIYPGKGKNFKVRLKEIPGPSFVFLGNDGNPQITKV
KPKRLGILQEEN

Specific function: Unknown

COG id: COG1315

COG function: function code L; Predicted polymerase, most proteins contain PALM domain, HD hydrolase domain and Zn-ribbon domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 63130; Mature: 63130

Theoretical pI: Translated: 5.55; Mature: 5.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISTLKPRMSDSLKNFTDSLLKDLEENENGFFKIENEDGLAYLSVFPAGKKGKPVDAKEI
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEEEEECCCCCCCCCCHHHH
LRRIELFQITESSPISIKEIANKSDGLTHLIGKWPGKPESSRIEIEISEDRMKAFLIFHP
HHHHHEEEECCCCCCCHHHHCCCCCCHHHHHHCCCCCCCCCEEEEEEECCCEEEEEEECC
PKYGGKILNSEQIQESIRERGIKFGIRNEVLNLLSEEPEYGKKILIAEGESPVPGKNGDI
CCCCCCCCCHHHHHHHHHHCCCEECHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCE
RVLFIHPAAPNLEEDEYGRVDFKNIQIIQSVAKDQKLAEKISPLPGKEGKNVLGEILPYD
EEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCC
SGKEAEWKLGLNVRLSSDGISVHSLINGRPILDRQGTIRVDEICHLENVDFSTGNVNFPG
CCCCCEEEEEEEEEECCCCCEEEEECCCCCEECCCCCEEHHHEEEECCCCCCCCCCCCCE
TIIVEGSIADGFTLETEGSIIVKKSVGKVFLKAGGDVVLSGGFMGRNGGLIESGADIYTR
EEEEECCCCCCEEEECCCCEEEEECCCEEEEECCCCEEEECCEECCCCCCCCCCHHHHHH
FVEQGRLIAKNTIFIEEASMHSELVAGESVVIRGGRGELIGGSCVAGKSIICTKLGAIAE
HHHCCCEEEEEEEEEEECHHHHHHHCCCEEEEECCCCCEECCCCCCCCEEHHHHHCCHHC
TKTSVSVGIRPELLDDLEKLRLEIQKNKEILKKVEQSLIKLNEDSQRRQLTIEEKESLPK
CCCEEEECCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHEEEEHHHHCCCH
LSAIKQKYSGILNNLLGQEQSMIMGFEPDKDSYVEVEQEIFPGVDIYPGKGKNFKVRLKE
HHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCEEEHHHHCCCCEEECCCCCCEEEEEEE
IPGPSFVFLGNDGNPQITKVKPKRLGILQEEN
CCCCCEEEEECCCCCCEEEECHHHCCCEECCC
>Mature Secondary Structure
MISTLKPRMSDSLKNFTDSLLKDLEENENGFFKIENEDGLAYLSVFPAGKKGKPVDAKEI
CCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEEEEECCCCCCCCCCHHHH
LRRIELFQITESSPISIKEIANKSDGLTHLIGKWPGKPESSRIEIEISEDRMKAFLIFHP
HHHHHEEEECCCCCCCHHHHCCCCCCHHHHHHCCCCCCCCCEEEEEEECCCEEEEEEECC
PKYGGKILNSEQIQESIRERGIKFGIRNEVLNLLSEEPEYGKKILIAEGESPVPGKNGDI
CCCCCCCCCHHHHHHHHHHCCCEECHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCE
RVLFIHPAAPNLEEDEYGRVDFKNIQIIQSVAKDQKLAEKISPLPGKEGKNVLGEILPYD
EEEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCC
SGKEAEWKLGLNVRLSSDGISVHSLINGRPILDRQGTIRVDEICHLENVDFSTGNVNFPG
CCCCCEEEEEEEEEECCCCCEEEEECCCCCEECCCCCEEHHHEEEECCCCCCCCCCCCCE
TIIVEGSIADGFTLETEGSIIVKKSVGKVFLKAGGDVVLSGGFMGRNGGLIESGADIYTR
EEEEECCCCCCEEEECCCCEEEEECCCEEEEECCCCEEEECCEECCCCCCCCCCHHHHHH
FVEQGRLIAKNTIFIEEASMHSELVAGESVVIRGGRGELIGGSCVAGKSIICTKLGAIAE
HHHCCCEEEEEEEEEEECHHHHHHHCCCEEEEECCCCCEECCCCCCCCEEHHHHHCCHHC
TKTSVSVGIRPELLDDLEKLRLEIQKNKEILKKVEQSLIKLNEDSQRRQLTIEEKESLPK
CCCEEEECCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCHHEEEEHHHHCCCH
LSAIKQKYSGILNNLLGQEQSMIMGFEPDKDSYVEVEQEIFPGVDIYPGKGKNFKVRLKE
HHHHHHHHHHHHHHHHCCCCCEEEECCCCCCCCEEEHHHHCCCCEEECCCCCCEEEEEEE
IPGPSFVFLGNDGNPQITKVKPKRLGILQEEN
CCCCCEEEEECCCCCCEEEECHHHCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA