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The map label for this gene is 45657353

Identifier: 45657353

GI number: 45657353

Start: 1826786

End: 1827661

Strand: Reverse

Name: 45657353

Synonym: LIC11478

Alternate gene names: NA

Gene position: 1827661-1826786 (Counterclockwise)

Preceding gene: 45657358

Following gene: 45657352

Centisome position: 42.73

GC content: 31.39

Gene sequence:

>876_bases
TTGGAAAATTCTAATCGAAACCCCGGACAAATTCAGTTCCGGTTTTCTTTTTTTCTACGGATGAGAATAAAAACTTCTGT
ATTTATGAGACTAAATATCCGATACGTTTCCTTCTCTTTTTTTCTGTTGTTATTTTTTGTTTTCTGTTCCTCCGATGAGG
AAATGATCTGGGAAGCAAGAGATTCTATTTCTAAAGGGAACACTGCAGAAGCAATGCGTCTTTACGAGATAATCCTTAAA
AAAAATCCAACCCATTTAGAAGCCAATAGAACTCTTGGAATGATCCTAGCGGATAGCGGGGTTGCTCTCAATTCCGCTGC
GTTCTATTTAGAACGAGCAGAATCATCTCTTCCAGGTGATTCCTCTCTTTTACTTTATCTTCTTGAAATTCATTTACAAG
AAAAAGATAGGGATAAAACCAAACGAATTTTAGAAAAATTTTCTAAATCAAAAGACAAAGAAATGGAAAATTATGCGATT
TTTCTTAGAGATTGTCTTTTAGATAGAAAGAAAAACCAAACCGAATTCAATCGATTTAAAACTAGTGAAATTCCCGCCTT
TCTTCCACCTGCGAGAAGACTCTTTTTAAAATGTGAACTTTCACTTTACAGCGTATCTAAAAACTCGGAGCAGTTTTATT
TTGATCATTCAATCATTAAACAATTCAAACTGAATCTATTTTTTTCTCAACAGAAAATTTTTTTTCTAAAACCGATCACA
AAGAATTTTAAAACTTTATCCATAGAAAAAAATTATCTCCCTAAAATAACTTTAGTAAATTATAATTATATTAAATTCTT
ACTTTTTTCAAATCCAGACTCTTTTTTACAAAATTCTCATTTACAAAATTGTCTCTACGAACCTCACATCTCATGA

Upstream 100 bases:

>100_bases
CACTGCTTTTAGTCCCGTCTGAAATGTTTAACAAGTACTAAATCCTTCGGACATTTCCCCTCAGGAGAATTAAACTTTTT
TATGTTGCCTAAAGGGTTTA

Downstream 100 bases:

>100_bases
GTTACTTAAAATTTTCTTCCTTTTTCGTTTTACAAAGTAGCAATATTTTATTTTTAAAACTTAGTTTTTTGTTCGTTTTT
AAACCAGAAATACTTTCCTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 291; Mature: 291

Protein sequence:

>291_residues
MENSNRNPGQIQFRFSFFLRMRIKTSVFMRLNIRYVSFSFFLLLFFVFCSSDEEMIWEARDSISKGNTAEAMRLYEIILK
KNPTHLEANRTLGMILADSGVALNSAAFYLERAESSLPGDSSLLLYLLEIHLQEKDRDKTKRILEKFSKSKDKEMENYAI
FLRDCLLDRKKNQTEFNRFKTSEIPAFLPPARRLFLKCELSLYSVSKNSEQFYFDHSIIKQFKLNLFFSQQKIFFLKPIT
KNFKTLSIEKNYLPKITLVNYNYIKFLLFSNPDSFLQNSHLQNCLYEPHIS

Sequences:

>Translated_291_residues
MENSNRNPGQIQFRFSFFLRMRIKTSVFMRLNIRYVSFSFFLLLFFVFCSSDEEMIWEARDSISKGNTAEAMRLYEIILK
KNPTHLEANRTLGMILADSGVALNSAAFYLERAESSLPGDSSLLLYLLEIHLQEKDRDKTKRILEKFSKSKDKEMENYAI
FLRDCLLDRKKNQTEFNRFKTSEIPAFLPPARRLFLKCELSLYSVSKNSEQFYFDHSIIKQFKLNLFFSQQKIFFLKPIT
KNFKTLSIEKNYLPKITLVNYNYIKFLLFSNPDSFLQNSHLQNCLYEPHIS
>Mature_291_residues
MENSNRNPGQIQFRFSFFLRMRIKTSVFMRLNIRYVSFSFFLLLFFVFCSSDEEMIWEARDSISKGNTAEAMRLYEIILK
KNPTHLEANRTLGMILADSGVALNSAAFYLERAESSLPGDSSLLLYLLEIHLQEKDRDKTKRILEKFSKSKDKEMENYAI
FLRDCLLDRKKNQTEFNRFKTSEIPAFLPPARRLFLKCELSLYSVSKNSEQFYFDHSIIKQFKLNLFFSQQKIFFLKPIT
KNFKTLSIEKNYLPKITLVNYNYIKFLLFSNPDSFLQNSHLQNCLYEPHIS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 34472; Mature: 34472

Theoretical pI: Translated: 9.82; Mature: 9.82

Prosite motif: PS00141 ASP_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENSNRNPGQIQFRFSFFLRMRIKTSVFMRLNIRYVSFSFFLLLFFVFCSSDEEMIWEAR
CCCCCCCCCEEEEEEHEEEHHHHHEEEEEEEEEEEHHHHHHHHHHHHHHCCCHHHHHHHH
DSISKGNTAEAMRLYEIILKKNPTHLEANRTLGMILADSGVALNSAAFYLERAESSLPGD
HHCCCCCHHHHHHHHHHHHCCCCCEEECCCEEEEEEECCCCEECHHHHHHHHHHCCCCCC
SSLLLYLLEIHLQEKDRDKTKRILEKFSKSKDKEMENYAIFLRDCLLDRKKNQTEFNRFK
HHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHC
TSEIPAFLPPARRLFLKCELSLYSVSKNSEQFYFDHSIIKQFKLNLFFSQQKIFFLKPIT
CCCCCCCCCHHHEEEEEEEEEEEEECCCCCEEEECHHHHHHHHHHEEEECCEEEEEECCC
KNFKTLSIEKNYLPKITLVNYNYIKFLLFSNPDSFLQNSHLQNCLYEPHIS
CCCEEEEEECCCCCEEEEEECCEEEEEEECCCHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MENSNRNPGQIQFRFSFFLRMRIKTSVFMRLNIRYVSFSFFLLLFFVFCSSDEEMIWEAR
CCCCCCCCCEEEEEEHEEEHHHHHEEEEEEEEEEEHHHHHHHHHHHHHHCCCHHHHHHHH
DSISKGNTAEAMRLYEIILKKNPTHLEANRTLGMILADSGVALNSAAFYLERAESSLPGD
HHCCCCCHHHHHHHHHHHHCCCCCEEECCCEEEEEEECCCCEECHHHHHHHHHHCCCCCC
SSLLLYLLEIHLQEKDRDKTKRILEKFSKSKDKEMENYAIFLRDCLLDRKKNQTEFNRFK
HHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHC
TSEIPAFLPPARRLFLKCELSLYSVSKNSEQFYFDHSIIKQFKLNLFFSQQKIFFLKPIT
CCCCCCCCCHHHEEEEEEEEEEEEECCCCCEEEECHHHHHHHHHHEEEECCEEEEEECCC
KNFKTLSIEKNYLPKITLVNYNYIKFLLFSNPDSFLQNSHLQNCLYEPHIS
CCCEEEEEECCCCCEEEEEECCEEEEEEECCCHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA