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The map label for this gene is 45657352

Identifier: 45657352

GI number: 45657352

Start: 1825627

End: 1826655

Strand: Reverse

Name: 45657352

Synonym: LIC11477

Alternate gene names: NA

Gene position: 1826655-1825627 (Counterclockwise)

Preceding gene: 45657353

Following gene: 45657351

Centisome position: 42.71

GC content: 35.28

Gene sequence:

>1029_bases
ATGAATTCTTTTTCCATCGGCAAAATCGTTTTTCTTTTTATCACCTGTATTTTGTTAGTTGAATTTATCATGAGAATATT
CCCTCCTACAGGTCTGATTTATAAACTCAGAGATAAACAAGTTCATTGTATCGAAGAATGGGAAATTCCGGAAATTCTAC
TCTGTCCTAATTCAGATACAATCCTCCCCCACCCTGCCGGATTTACTTTTAGAGTTCGAGTAGACGAACAAGGAGAAAGA
ATTGTCTCGGAAGAAAAAATGGTTTCAGCTAAAAAACCTGAAGTTTGGTTGATGGGGGATTCGATTGCCTATGGTTTTGG
CCTCAACGATTCTGACACGATCGCTTGGAAAATGCAAAAGGTTCTTCAACAGTTTGGATTTCAAGTTCGAAATCTAGGGG
TTGATTCTCTTGGCACCGGCGGGGTTCAAAGAAGAATGGAAAGAAAGCTAAATTGTAAAGAATCGAATCGGGATCATTGT
ATTTTACCGAAAGCAATTTTTTGGATTTATCATCCTTCAGATCTGCAAGACGTACACAGAGATTTCTACTTAAGAAATTC
ATTATTTGGTAGATGGTTTTTTCGCAGCTCGATTTTTTTATCCAAATATAGCTCCCTTTATAACTTTTTTAAAATCCAAA
ACGAAAATAGAAAACTTGAAAATCTTCGTAAAAAAGGCCCTGAAATTATTCCAGAAACTCTTTCCAATTACCCGCAAGAT
CATCCTTCCTTTGTTGAAATGAAAACTTTTTTTAATACATGCAAAAAATTGAATATTAATTTGACCGTAGTTTTATACCC
AAACGGTTCACATTCCTTAACCCCTCTTACTTCTACGCCTTTATTAGATCAAATCGCTCAGATTGCAAAACAAAATGGTT
TTTCTGTTTTGGATACAAGGCCTGATTTTATTCGAGAATTTAATCAATACAAAACAGATTTTTATCTTCCCAATGATGGT
CATCCGAATTCTACCGCAGCCAAACTCATCGCTGACAGAATTTCAAAAGAAGTCATTTCAAAGTTTTGA

Upstream 100 bases:

>100_bases
TACAAAGTAGCAATATTTTATTTTTAAAACTTAGTTTTTTGTTCGTTTTTAAACCAGAAATACTTTCCTACAAATCCTTC
GCCTATACTTATATTTTTAT

Downstream 100 bases:

>100_bases
CGAGTATTCTACTCCAACTGCATTTGAAATGCTCCCAATGTATGGCTTCATTTTATGTAATGTAAGTTCTGCATAAAAAT
TGAGTTTTTCTATAAAAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 342; Mature: 342

Protein sequence:

>342_residues
MNSFSIGKIVFLFITCILLVEFIMRIFPPTGLIYKLRDKQVHCIEEWEIPEILLCPNSDTILPHPAGFTFRVRVDEQGER
IVSEEKMVSAKKPEVWLMGDSIAYGFGLNDSDTIAWKMQKVLQQFGFQVRNLGVDSLGTGGVQRRMERKLNCKESNRDHC
ILPKAIFWIYHPSDLQDVHRDFYLRNSLFGRWFFRSSIFLSKYSSLYNFFKIQNENRKLENLRKKGPEIIPETLSNYPQD
HPSFVEMKTFFNTCKKLNINLTVVLYPNGSHSLTPLTSTPLLDQIAQIAKQNGFSVLDTRPDFIREFNQYKTDFYLPNDG
HPNSTAAKLIADRISKEVISKF

Sequences:

>Translated_342_residues
MNSFSIGKIVFLFITCILLVEFIMRIFPPTGLIYKLRDKQVHCIEEWEIPEILLCPNSDTILPHPAGFTFRVRVDEQGER
IVSEEKMVSAKKPEVWLMGDSIAYGFGLNDSDTIAWKMQKVLQQFGFQVRNLGVDSLGTGGVQRRMERKLNCKESNRDHC
ILPKAIFWIYHPSDLQDVHRDFYLRNSLFGRWFFRSSIFLSKYSSLYNFFKIQNENRKLENLRKKGPEIIPETLSNYPQD
HPSFVEMKTFFNTCKKLNINLTVVLYPNGSHSLTPLTSTPLLDQIAQIAKQNGFSVLDTRPDFIREFNQYKTDFYLPNDG
HPNSTAAKLIADRISKEVISKF
>Mature_342_residues
MNSFSIGKIVFLFITCILLVEFIMRIFPPTGLIYKLRDKQVHCIEEWEIPEILLCPNSDTILPHPAGFTFRVRVDEQGER
IVSEEKMVSAKKPEVWLMGDSIAYGFGLNDSDTIAWKMQKVLQQFGFQVRNLGVDSLGTGGVQRRMERKLNCKESNRDHC
ILPKAIFWIYHPSDLQDVHRDFYLRNSLFGRWFFRSSIFLSKYSSLYNFFKIQNENRKLENLRKKGPEIIPETLSNYPQD
HPSFVEMKTFFNTCKKLNINLTVVLYPNGSHSLTPLTSTPLLDQIAQIAKQNGFSVLDTRPDFIREFNQYKTDFYLPNDG
HPNSTAAKLIADRISKEVISKF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39694; Mature: 39694

Theoretical pI: Translated: 8.93; Mature: 8.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNSFSIGKIVFLFITCILLVEFIMRIFPPTGLIYKLRDKQVHCIEEWEIPEILLCPNSDT
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEECCCCCCEEEECCCCCC
ILPHPAGFTFRVRVDEQGERIVSEEKMVSAKKPEVWLMGDSIAYGFGLNDSDTIAWKMQK
CCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCEEEEECCEEEECCCCCCCHHHHHHHH
VLQQFGFQVRNLGVDSLGTGGVQRRMERKLNCKESNRDHCILPKAIFWIYHPSDLQDVHR
HHHHHCCHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCEEECEEEEEEECCCCHHHHHH
DFYLRNSLFGRWFFRSSIFLSKYSSLYNFFKIQNENRKLENLRKKGPEIIPETLSNYPQD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHCCCCC
HPSFVEMKTFFNTCKKLNINLTVVLYPNGSHSLTPLTSTPLLDQIAQIAKQNGFSVLDTR
CCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCEEECCC
PDFIREFNQYKTDFYLPNDGHPNSTAAKLIADRISKEVISKF
HHHHHHHHHHCCEEECCCCCCCCHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNSFSIGKIVFLFITCILLVEFIMRIFPPTGLIYKLRDKQVHCIEEWEIPEILLCPNSDT
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCEEEECCCCCCEEEECCCCCC
ILPHPAGFTFRVRVDEQGERIVSEEKMVSAKKPEVWLMGDSIAYGFGLNDSDTIAWKMQK
CCCCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCEEEEECCEEEECCCCCCCHHHHHHHH
VLQQFGFQVRNLGVDSLGTGGVQRRMERKLNCKESNRDHCILPKAIFWIYHPSDLQDVHR
HHHHHCCHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCEEECEEEEEEECCCCHHHHHH
DFYLRNSLFGRWFFRSSIFLSKYSSLYNFFKIQNENRKLENLRKKGPEIIPETLSNYPQD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCCCHHHHHHHCCCCC
HPSFVEMKTFFNTCKKLNINLTVVLYPNGSHSLTPLTSTPLLDQIAQIAKQNGFSVLDTR
CCCHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCEEECCC
PDFIREFNQYKTDFYLPNDGHPNSTAAKLIADRISKEVISKF
HHHHHHHHHHCCEEECCCCCCCCHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA