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The map label for this gene is yhjL [C]

Identifier: 45657285

GI number: 45657285

Start: 1732303

End: 1733412

Strand: Reverse

Name: yhjL [C]

Synonym: LIC11408

Alternate gene names: 45657285

Gene position: 1733412-1732303 (Counterclockwise)

Preceding gene: 45657288

Following gene: 45657284

Centisome position: 40.53

GC content: 34.5

Gene sequence:

>1110_bases
ATGGAAAATCCTAACGTGGAAAAAGAAGAAGAGGATAAACAATTTGCCGTTATCAAAGGACTCGCTAAAGAAGCGTACAA
ACTTTTAGACTCACACCAGTTTCCAAAAGCAGAAGCGAAGTTGAAAGAACTTCTAGAAAAAGATCCACACAATACTTATG
GCTTAGTAGGAATGGGCGATCTGTTTTTTAAGAAAAAAGACTATAAGAATGCGATAGAATATTATCATAAATGTATCCAA
GAAGATCCTTCTAATAAATTTTCTCTCATGGGATTAATGAACTGTTATCGCGAAATGAATCTTCTTTCCAGAGTAATCGA
AGTAGCAGAAGAATACAGACATATCACCATCACAGACGCTTCGATTTTAAGTCGAGTTGCAGACGCACATAGAAAATTAA
AGAATTTTAAAGAATCAGAAATTTATTATATGCAAGCTTTACAGATCAATCCTAAAGATCAGTATGTGATCGTAGGTTTA
GGACATCTCTATTTTGCCTGCCAGAAATATAAAGACGCAATTCATTGGTGGGAAAAATTACTTCTGATTCAACCAGACAA
CATTAAAATTCTTACTGAGATAGGAAATTCGTATCGTAAAATCAAAGACTACGACGAAGCAATCCAGTATTACCATAGGG
CTGCGGAATTAGATCGAAAAAACTTTTTCGCGTTATACGGTCTTGCAGAAAGTTATCGAGGTAAAAAAGATTTCCACAAG
GCAAATCAATATTGGGAAAGAATTCTAGAATTTGATCCAGATAACAAACTCATTATTAACCGTTATGCGGATAGCTTAAG
GGGTATGGGCGAGTTCGATAAAGCGCTGGAATGTTTTAACAAGATTTTAGCAGAAGGAGAAGATTATTTTGCACTTCTTG
GAAAAGCTTCTTCTCTCAAATTAATTGGTAAAAAAGATAAAGCAGAAGAAATTTATTTAGACCTACATAAAAAATTTCCT
ATGGATCCAAGACCCCTTTTAGAACTTTCGGATCTACACGTTGAAATGGGTAAACCTACGGAAGCAATTCGACTATTAGA
AGATTTTCAGAAAAAACAACCTCTGAACGAAGAAATCAAACATAAACTTGAAAACATTCGAGGTGAATAA

Upstream 100 bases:

>100_bases
ATATTTAAGCTCAAAAGAATATTCAATCAATCTAGTGCGTCAAAAATAATAATGCGAATTCTAAATTTGGAAGAAAACAA
ACTTTAAAAGAGAGAATCAA

Downstream 100 bases:

>100_bases
CATTCCTTTCTTTTAAAAAGTATAGGAACTAAAAATATCTTTTTAGAATTTTTGCCTATTCTAAGACCATTATTCTTAAT
TCTACAAAACAAAACTCATA

Product: hypothetical protein

Products: NA

Alternate protein names: TPR Domain-Containing Protein; Peptidase; Tetratricopeptide TPR_2 Repeat Protein; Tetratricopeptide Repeat Domain Protein; TPR Repeat Protein; Tetratricopeptide Repeat Family Protein; TPR-Repeat-Containing Protein; Peptidase S1 And S6 Chymotrypsin/Hap; Tetratricopeptide Repeat-Containing Protein; Tetratricopeptide Domain-Containing Protein; Tetratricopeptide Repeat Protein; Slei Family Protein; O-Linked GlcNAc Transferase; Peptidase S; Beta-Lactamase Domain-Containing Protein

Number of amino acids: Translated: 369; Mature: 369

Protein sequence:

>369_residues
MENPNVEKEEEDKQFAVIKGLAKEAYKLLDSHQFPKAEAKLKELLEKDPHNTYGLVGMGDLFFKKKDYKNAIEYYHKCIQ
EDPSNKFSLMGLMNCYREMNLLSRVIEVAEEYRHITITDASILSRVADAHRKLKNFKESEIYYMQALQINPKDQYVIVGL
GHLYFACQKYKDAIHWWEKLLLIQPDNIKILTEIGNSYRKIKDYDEAIQYYHRAAELDRKNFFALYGLAESYRGKKDFHK
ANQYWERILEFDPDNKLIINRYADSLRGMGEFDKALECFNKILAEGEDYFALLGKASSLKLIGKKDKAEEIYLDLHKKFP
MDPRPLLELSDLHVEMGKPTEAIRLLEDFQKKQPLNEEIKHKLENIRGE

Sequences:

>Translated_369_residues
MENPNVEKEEEDKQFAVIKGLAKEAYKLLDSHQFPKAEAKLKELLEKDPHNTYGLVGMGDLFFKKKDYKNAIEYYHKCIQ
EDPSNKFSLMGLMNCYREMNLLSRVIEVAEEYRHITITDASILSRVADAHRKLKNFKESEIYYMQALQINPKDQYVIVGL
GHLYFACQKYKDAIHWWEKLLLIQPDNIKILTEIGNSYRKIKDYDEAIQYYHRAAELDRKNFFALYGLAESYRGKKDFHK
ANQYWERILEFDPDNKLIINRYADSLRGMGEFDKALECFNKILAEGEDYFALLGKASSLKLIGKKDKAEEIYLDLHKKFP
MDPRPLLELSDLHVEMGKPTEAIRLLEDFQKKQPLNEEIKHKLENIRGE
>Mature_369_residues
MENPNVEKEEEDKQFAVIKGLAKEAYKLLDSHQFPKAEAKLKELLEKDPHNTYGLVGMGDLFFKKKDYKNAIEYYHKCIQ
EDPSNKFSLMGLMNCYREMNLLSRVIEVAEEYRHITITDASILSRVADAHRKLKNFKESEIYYMQALQINPKDQYVIVGL
GHLYFACQKYKDAIHWWEKLLLIQPDNIKILTEIGNSYRKIKDYDEAIQYYHRAAELDRKNFFALYGLAESYRGKKDFHK
ANQYWERILEFDPDNKLIINRYADSLRGMGEFDKALECFNKILAEGEDYFALLGKASSLKLIGKKDKAEEIYLDLHKKFP
MDPRPLLELSDLHVEMGKPTEAIRLLEDFQKKQPLNEEIKHKLENIRGE

Specific function: Unknown

COG id: COG0457

COG function: function code R; FOG: TPR repeat

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI7661950, Length=260, Percent_Identity=24.2307692307692, Blast_Score=79, Evalue=7e-15,
Organism=Homo sapiens, GI32307148, Length=345, Percent_Identity=23.1884057971014, Blast_Score=76, Evalue=4e-14,
Organism=Homo sapiens, GI32307150, Length=332, Percent_Identity=23.4939759036145, Blast_Score=74, Evalue=3e-13,
Organism=Homo sapiens, GI28329439, Length=208, Percent_Identity=23.0769230769231, Blast_Score=71, Evalue=2e-12,
Organism=Homo sapiens, GI28558993, Length=208, Percent_Identity=23.0769230769231, Blast_Score=71, Evalue=2e-12,
Organism=Drosophila melanogaster, GI28574256, Length=260, Percent_Identity=24.2307692307692, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI28574254, Length=260, Percent_Identity=24.2307692307692, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI17137540, Length=238, Percent_Identity=22.6890756302521, Blast_Score=70, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43439; Mature: 43439

Theoretical pI: Translated: 6.80; Mature: 6.80

Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENPNVEKEEEDKQFAVIKGLAKEAYKLLDSHQFPKAEAKLKELLEKDPHNTYGLVGMGD
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCEECHH
LFFKKKDYKNAIEYYHKCIQEDPSNKFSLMGLMNCYREMNLLSRVIEVAEEYRHITITDA
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEHH
SILSRVADAHRKLKNFKESEIYYMQALQINPKDQYVIVGLGHLYFACQKYKDAIHWWEKL
HHHHHHHHHHHHHHCCCHHHEEEEEEEEECCCCCEEEEEHHHHHHHHHHHHHHHHHHHHH
LLIQPDNIKILTEIGNSYRKIKDYDEAIQYYHRAAELDRKNFFALYGLAESYRGKKDFHK
HEECCCCEEEHHHHCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCHHHHCCHHHHHH
ANQYWERILEFDPDNKLIINRYADSLRGMGEFDKALECFNKILAEGEDYFALLGKASSLK
HHHHHHHHHHCCCCCCEEHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHCCCCCEE
LIGKKDKAEEIYLDLHKKFPMDPRPLLELSDLHVEMGKPTEAIRLLEDFQKKQPLNEEIK
EECCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHH
HKLENIRGE
HHHHHCCCC
>Mature Secondary Structure
MENPNVEKEEEDKQFAVIKGLAKEAYKLLDSHQFPKAEAKLKELLEKDPHNTYGLVGMGD
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCEECHH
LFFKKKDYKNAIEYYHKCIQEDPSNKFSLMGLMNCYREMNLLSRVIEVAEEYRHITITDA
HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEHH
SILSRVADAHRKLKNFKESEIYYMQALQINPKDQYVIVGLGHLYFACQKYKDAIHWWEKL
HHHHHHHHHHHHHHCCCHHHEEEEEEEEECCCCCEEEEEHHHHHHHHHHHHHHHHHHHHH
LLIQPDNIKILTEIGNSYRKIKDYDEAIQYYHRAAELDRKNFFALYGLAESYRGKKDFHK
HEECCCCEEEHHHHCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHCCHHHHCCHHHHHH
ANQYWERILEFDPDNKLIINRYADSLRGMGEFDKALECFNKILAEGEDYFALLGKASSLK
HHHHHHHHHHCCCCCCEEHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHCCCCCEE
LIGKKDKAEEIYLDLHKKFPMDPRPLLELSDLHVEMGKPTEAIRLLEDFQKKQPLNEEIK
EECCCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCHHHH
HKLENIRGE
HHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA