Click here to switch to the map view.

The map label for this gene is 45657288

Identifier: 45657288

GI number: 45657288

Start: 1737172

End: 1737579

Strand: Reverse

Name: 45657288

Synonym: LIC11411

Alternate gene names: NA

Gene position: 1737579-1737172 (Counterclockwise)

Preceding gene: 45657289

Following gene: 45657285

Centisome position: 40.62

GC content: 33.58

Gene sequence:

>408_bases
ATGATAACAACGAATACAAAAATACATTACTTTGAAATTTGCGTTGAAAACTATCATTGTGACGAGTACAAAAACCTAAA
TTTAGAAAATGTACAACTCTTTTTGAACGAAGCCAGAAAACAAGCTCTCAGAGAAATCGAATTGAATTCTCAAAACTTAG
ACCTCACTCATATAGAACCAATTGTACTTTGGTCGGAAAGTGATTACAGAGGTCAGATCCATTTTCCGGATTCAATTTTA
GTCCAAACCGAATTTAGGACCATTACAAACGCTCGTTACAAAATCATTCAGAAACTGATCCGAAAATCGGACAGTAGAGT
TGTTTGTAATTCAAACTCATTTTGTATTCTTTTTGATTCCAATCGAAATAGACCTTGGAAACAATCCGTTTCTTTAAGAG
CGGTTTAA

Upstream 100 bases:

>100_bases
CGACCCAAACTCTCCGAAAAAAACCCATTGAGCAATTTTAGAAGCAAATTTACGACGCTATTCTTTTTATTCCAACAGTT
AGAGAAAAAGGGAAATAAGG

Downstream 100 bases:

>100_bases
AATTCATTCCAAGATTTTAAGATCAATCCGATTTACTGATAAAACAAGATCTTTTTGAAAATGTAGGAACTACTACATTT
CTTAGAGAGAACACTTTATA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 135; Mature: 135

Protein sequence:

>135_residues
MITTNTKIHYFEICVENYHCDEYKNLNLENVQLFLNEARKQALREIELNSQNLDLTHIEPIVLWSESDYRGQIHFPDSIL
VQTEFRTITNARYKIIQKLIRKSDSRVVCNSNSFCILFDSNRNRPWKQSVSLRAV

Sequences:

>Translated_135_residues
MITTNTKIHYFEICVENYHCDEYKNLNLENVQLFLNEARKQALREIELNSQNLDLTHIEPIVLWSESDYRGQIHFPDSIL
VQTEFRTITNARYKIIQKLIRKSDSRVVCNSNSFCILFDSNRNRPWKQSVSLRAV
>Mature_135_residues
MITTNTKIHYFEICVENYHCDEYKNLNLENVQLFLNEARKQALREIELNSQNLDLTHIEPIVLWSESDYRGQIHFPDSIL
VQTEFRTITNARYKIIQKLIRKSDSRVVCNSNSFCILFDSNRNRPWKQSVSLRAV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16036; Mature: 16036

Theoretical pI: Translated: 7.96; Mature: 7.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
3.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITTNTKIHYFEICVENYHCDEYKNLNLENVQLFLNEARKQALREIELNSQNLDLTHIEP
CCCCCCEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCE
IVLWSESDYRGQIHFPDSILVQTEFRTITNARYKIIQKLIRKSDSRVVCNSNSFCILFDS
EEEECCCCCCEEEECCCEEEEEEEHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEEEEC
NRNRPWKQSVSLRAV
CCCCCCCCCEEEECC
>Mature Secondary Structure
MITTNTKIHYFEICVENYHCDEYKNLNLENVQLFLNEARKQALREIELNSQNLDLTHIEP
CCCCCCEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCE
IVLWSESDYRGQIHFPDSILVQTEFRTITNARYKIIQKLIRKSDSRVVCNSNSFCILFDS
EEEECCCCCCEEEECCCEEEEEEEHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEEEEC
NRNRPWKQSVSLRAV
CCCCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA