| Definition | Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_005823 |
| Length | 4,277,185 |
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The map label for this gene is fct [H]
Identifier: 45657223
GI number: 45657223
Start: 1658322
End: 1660562
Strand: Reverse
Name: fct [H]
Synonym: LIC11345
Alternate gene names: 45657223
Gene position: 1660562-1658322 (Counterclockwise)
Preceding gene: 45657224
Following gene: 45657221
Centisome position: 38.82
GC content: 34.36
Gene sequence:
>2241_bases ATGGAAAAAACCAAACCATTTATTGTTTTTAGTTTATTAAAAAATAATATTATCTTTTACTTCTTTTTAAGTTTTTTATC TTTAGAAACTTTTTTTTTCCCAGTTCGAGTGTTTTCTCAGGAACATTCAAAACAATTCAAAAAAGAATCTTCCGAAACTA AAGATTTAAAAACAGAAGAATTAAATAAAGATGAAAAGCAGTCTGAAGGTATATTCGTAAAAGGTTATACGGGCAAAGGA CTTACTGGAATGAAACAAAACGTACGCCTAAAAGATATTCCAGCCACCGTAAAGATCATAGACTATAAAGAGCTAAAAGC ACGCGCCGCAGATCAATGGCTTTCAGCTATATCGTACGTTCCTGGTATATTTGTAATTCAAAACTACGGAGGATTTAACA CTCTTACAATTCGAGGATTAGATTCTCGTAATACCCTTTTACTCAAAGATGGCGCAAGAGACGATACCTTTCTCATTCAA AACAGCTCTCCTATGAGCAACCTAACTAACGTTGAAAGAATTGAAATTCTGAAAGGACCCAATTCAGTTTTATATGGACA AGGAGCTATGGCGGGTGTAATCCATATCATCACTAAAAAACCTCAAAAAAAAGCTGGGTATGAATTTTCATTTACAAAAG GAAATTTTGGCTCTAAAAGAGCTTACGTAGGTGCCACCGGGCCAATCGGAACCGAATCTTTAAGATACAGAATAGACGCG GCCACTTCTGAGTATCAAGGTTTCAGAAAAAACTCTTACAACTTAAATAACATATCCACTTCTTTTGAATGGGATATTTC CGTAAAACATACTCTATCCATTCTTTCCGGAAAAAATTTCGACTTTATAAAACCAGACGCAGGTCTTCCAAAATCAAAAA AACCTAATATAGACTTGATCGCGCCCGGGGTATATTTAAATAATAACTACAATACTAAAGAAGACTATCTTAAAAACGAA AGCGGTAATTTTAAAATTCAACTAGATAGTAAATTTTCTAATAAGCTTTCGATGAAATCCTTTATTTCTTACTTACCTCA GACTTATTATTATTTTTCAGCAGAAGATCTAACGATTTCTTCCAGAGACGAAAATACGATCGAACGAGATCACTTTCATT TTGAAACGAAAAGATCTCCCTTACAGGGTACGGTTGAATTACAATGTATTTTTCAAACCGGGTTTAAACACAAACTTCTA TCTGGTTATGAATATCACTGGATGGTAAGTAGACATAGACAAAGATATTTTCCAATAGGTAGTACAAATATAAACGTTCT ATATCCCCAAATAGATTTAACTCAATCCTTGCCGGTAAATTTTAAAGATAGAAAAATCTTATATCAACAAATGCACTCTT TATATTTTCAAGACCTAATGGAACTTTCAAAAATTATAAAGTTCGTTTTAGGAGGAAGATATGACAGTTGGGTGAGAGAA AACGTGACAGAAAAACTATCCGATTGGAACGATAGATACGTTTCTAAACCAGAGGACAGAACCATTCATCGATTTGATGC TAAAGTGTTTACTTATAGACTAGGACTAGTTTATCAGCCTCTTCACTATTATACCGCTTACGTTGGTTATTCTACTGCGT TTATTCCTGTTACGTTTATCAATATAAAAGGCAATCAGCTTAAACCAGAAATGGGAGAACAAATAGAGTTAGGCCAAAGA CTCGAATTTGCCAAAGGAAAGATTCAATTGACGAGTGCACTTTTTGCCGCAAAAAAATATGACGTTGCAGTTAGGATTAA TTCTAAACCCGCTTTGTACAACCAAGCGGGAGAACTTAGAACCAACGGTTACGAATTTGATATAGATCTACGTTTAACCC AAAGATGGAGTTTAAAATCAGGATACGCACATACGATTGCAGAATGGGAATCTTTTCGTTTTGTAAATTCAAAAGGAAAT GAAATCGATTACAAAGGAAATCGACCAATCAATGTTCCAAGAAATACCGCCAATCTTTGGACTACTTATACTTTTGCTTC CGGTCTTGGATTTGGTTTAGGTGGACGTTATATAGATTCAATCGCTGGTGATAACGCAAATTCGTTTTCGATTCCGCCCT ATGGATTATACGACGCATCTCTATATTATCAATATAAACACTTTCGTTTTCAGATCAATTGTAACAACATATCCAATAAG AAATATTTTATATCTTCCACACCAAATCCAACTCCAGGCCCACCCAGACAATTTCTATTTACTGCAAGCGCTAAATTTTG A
Upstream 100 bases:
>100_bases CTTCATTAGAACATTTTGTTGAATATATCAACTTTGAGTGGTTGCGGTTTATATTGGGCCATCTTCCGGTTAACGTTCTT TTTTTAGAGGTTATCCTACT
Downstream 100 bases:
>100_bases ACAAAATCTTATATCCACTCTAAAAATTAAACACCTAAATATTTATCATAAAGTGCAATTTTAAGTGAGTTCGATAAAAT CTAATGCGAAAGCGATTATT
Product: ferrichrome-iron receptor
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 746; Mature: 746
Protein sequence:
>746_residues MEKTKPFIVFSLLKNNIIFYFFLSFLSLETFFFPVRVFSQEHSKQFKKESSETKDLKTEELNKDEKQSEGIFVKGYTGKG LTGMKQNVRLKDIPATVKIIDYKELKARAADQWLSAISYVPGIFVIQNYGGFNTLTIRGLDSRNTLLLKDGARDDTFLIQ NSSPMSNLTNVERIEILKGPNSVLYGQGAMAGVIHIITKKPQKKAGYEFSFTKGNFGSKRAYVGATGPIGTESLRYRIDA ATSEYQGFRKNSYNLNNISTSFEWDISVKHTLSILSGKNFDFIKPDAGLPKSKKPNIDLIAPGVYLNNNYNTKEDYLKNE SGNFKIQLDSKFSNKLSMKSFISYLPQTYYYFSAEDLTISSRDENTIERDHFHFETKRSPLQGTVELQCIFQTGFKHKLL SGYEYHWMVSRHRQRYFPIGSTNINVLYPQIDLTQSLPVNFKDRKILYQQMHSLYFQDLMELSKIIKFVLGGRYDSWVRE NVTEKLSDWNDRYVSKPEDRTIHRFDAKVFTYRLGLVYQPLHYYTAYVGYSTAFIPVTFINIKGNQLKPEMGEQIELGQR LEFAKGKIQLTSALFAAKKYDVAVRINSKPALYNQAGELRTNGYEFDIDLRLTQRWSLKSGYAHTIAEWESFRFVNSKGN EIDYKGNRPINVPRNTANLWTTYTFASGLGFGLGGRYIDSIAGDNANSFSIPPYGLYDASLYYQYKHFRFQINCNNISNK KYFISSTPNPTPGPPRQFLFTASAKF
Sequences:
>Translated_746_residues MEKTKPFIVFSLLKNNIIFYFFLSFLSLETFFFPVRVFSQEHSKQFKKESSETKDLKTEELNKDEKQSEGIFVKGYTGKG LTGMKQNVRLKDIPATVKIIDYKELKARAADQWLSAISYVPGIFVIQNYGGFNTLTIRGLDSRNTLLLKDGARDDTFLIQ NSSPMSNLTNVERIEILKGPNSVLYGQGAMAGVIHIITKKPQKKAGYEFSFTKGNFGSKRAYVGATGPIGTESLRYRIDA ATSEYQGFRKNSYNLNNISTSFEWDISVKHTLSILSGKNFDFIKPDAGLPKSKKPNIDLIAPGVYLNNNYNTKEDYLKNE SGNFKIQLDSKFSNKLSMKSFISYLPQTYYYFSAEDLTISSRDENTIERDHFHFETKRSPLQGTVELQCIFQTGFKHKLL SGYEYHWMVSRHRQRYFPIGSTNINVLYPQIDLTQSLPVNFKDRKILYQQMHSLYFQDLMELSKIIKFVLGGRYDSWVRE NVTEKLSDWNDRYVSKPEDRTIHRFDAKVFTYRLGLVYQPLHYYTAYVGYSTAFIPVTFINIKGNQLKPEMGEQIELGQR LEFAKGKIQLTSALFAAKKYDVAVRINSKPALYNQAGELRTNGYEFDIDLRLTQRWSLKSGYAHTIAEWESFRFVNSKGN EIDYKGNRPINVPRNTANLWTTYTFASGLGFGLGGRYIDSIAGDNANSFSIPPYGLYDASLYYQYKHFRFQINCNNISNK KYFISSTPNPTPGPPRQFLFTASAKF >Mature_746_residues MEKTKPFIVFSLLKNNIIFYFFLSFLSLETFFFPVRVFSQEHSKQFKKESSETKDLKTEELNKDEKQSEGIFVKGYTGKG LTGMKQNVRLKDIPATVKIIDYKELKARAADQWLSAISYVPGIFVIQNYGGFNTLTIRGLDSRNTLLLKDGARDDTFLIQ NSSPMSNLTNVERIEILKGPNSVLYGQGAMAGVIHIITKKPQKKAGYEFSFTKGNFGSKRAYVGATGPIGTESLRYRIDA ATSEYQGFRKNSYNLNNISTSFEWDISVKHTLSILSGKNFDFIKPDAGLPKSKKPNIDLIAPGVYLNNNYNTKEDYLKNE SGNFKIQLDSKFSNKLSMKSFISYLPQTYYYFSAEDLTISSRDENTIERDHFHFETKRSPLQGTVELQCIFQTGFKHKLL SGYEYHWMVSRHRQRYFPIGSTNINVLYPQIDLTQSLPVNFKDRKILYQQMHSLYFQDLMELSKIIKFVLGGRYDSWVRE NVTEKLSDWNDRYVSKPEDRTIHRFDAKVFTYRLGLVYQPLHYYTAYVGYSTAFIPVTFINIKGNQLKPEMGEQIELGQR LEFAKGKIQLTSALFAAKKYDVAVRINSKPALYNQAGELRTNGYEFDIDLRLTQRWSLKSGYAHTIAEWESFRFVNSKGN EIDYKGNRPINVPRNTANLWTTYTFASGLGFGLGGRYIDSIAGDNANSFSIPPYGLYDASLYYQYKHFRFQINCNNISNK KYFISSTPNPTPGPPRQFLFTASAKF
Specific function: Involved in the initial step of iron uptake by binding chrysobactin, an iron chelatin siderophore that allows the bacteria to extract iron from the environment [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell outer membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tonB-dependent receptor family [H]
Homologues:
Organism=Escherichia coli, GI1786344, Length=720, Percent_Identity=25.2777777777778, Blast_Score=160, Evalue=2e-40, Organism=Escherichia coli, GI1787024, Length=720, Percent_Identity=21.5277777777778, Blast_Score=107, Evalue=2e-24, Organism=Escherichia coli, GI1787723, Length=699, Percent_Identity=24.1773962804006, Blast_Score=106, Evalue=5e-24, Organism=Escherichia coli, GI1787344, Length=383, Percent_Identity=24.5430809399478, Blast_Score=81, Evalue=2e-16, Organism=Escherichia coli, GI1788478, Length=128, Percent_Identity=34.375, Blast_Score=74, Evalue=4e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR000531 - InterPro: IPR010916 - InterPro: IPR010105 [H]
Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 85767; Mature: 85767
Theoretical pI: Translated: 9.87; Mature: 9.87
Prosite motif: PS01156 TONB_DEPENDENT_REC_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEKTKPFIVFSLLKNNIIFYFFLSFLSLETFFFPVRVFSQEHSKQFKKESSETKDLKTEE CCCCCCEEEEEEHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH LNKDEKQSEGIFVKGYTGKGLTGMKQNVRLKDIPATVKIIDYKELKARAADQWLSAISYV CCCCHHHCCCEEEEECCCCCCCCCCCCCEEEECCCEEEEEEHHHHHHHHHHHHHHHHHHC PGIFVIQNYGGFNTLTIRGLDSRNTLLLKDGARDDTFLIQNSSPMSNLTNVERIEILKGP CCEEEEECCCCEEEEEEEECCCCCEEEEECCCCCCEEEEECCCCCCCCCCCEEEEEEECC NSVLYGQGAMAGVIHIITKKPQKKAGYEFSFTKGNFGSKRAYVGATGPIGTESLRYRIDA CCEEECCCCHHEEEEEEECCCCHHCCCEEEEECCCCCCCEEEEECCCCCCCCCEEEEEEC ATSEYQGFRKNSYNLNNISTSFEWDISVKHTLSILSGKNFDFIKPDAGLPKSKKPNIDLI CCHHHCCCCCCCCCCCCCCCEEEEEEEHHHEEHHHCCCCCCEECCCCCCCCCCCCCEEEE APGVYLNNNYNTKEDYLKNESGNFKIQLDSKFSNKLSMKSFISYLPQTYYYFSAEDLTIS ECCEEECCCCCCHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHCCCEEEEEEECCEEEE SRDENTIERDHFHFETKRSPLQGTVELQCIFQTGFKHKLLSGYEYHWMVSRHRQRYFPIG CCCCCCCCCCCEEEECCCCCCCCEEEEEEEEECCCCHHHHCCCEEEEEEECCCCCCCCCC STNINVLYPQIDLTQSLPVNFKDRKILYQQMHSLYFQDLMELSKIIKFVLGGRYDSWVRE CCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH NVTEKLSDWNDRYVSKPEDRTIHRFDAKVFTYRLGLVYQPLHYYTAYVGYSTAFIPVTFI HHHHHHHCCCHHCCCCCCCCCEEHCCCEEEEEEECCEECCHHHHHHHHCCCEEEEEEEEE NIKGNQLKPEMGEQIELGQRLEFAKGKIQLTSALFAAKKYDVAVRINSKPALYNQAGELR EEECCCCCCCCCCHHHHCCHHHHCCCEEEEHHHHHHHEEEEEEEEECCCCCCCCCCCCCC TNGYEFDIDLRLTQRWSLKSGYAHTIAEWESFRFVNSKGNEIDYKGNRPINVPRNTANLW CCCEEEEEEEEEEECCCCCCCCHHHHHHHHHEEEECCCCCEEECCCCCCCCCCCCCCCEE TTYTFASGLGFGLGGRYIDSIAGDNANSFSIPPYGLYDASLYYQYKHFRFQINCNNISNK EEEEECCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEEEECCCCCC KYFISSTPNPTPGPPRQFLFTASAKF EEEEECCCCCCCCCCCEEEEEECCCC >Mature Secondary Structure MEKTKPFIVFSLLKNNIIFYFFLSFLSLETFFFPVRVFSQEHSKQFKKESSETKDLKTEE CCCCCCEEEEEEHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHH LNKDEKQSEGIFVKGYTGKGLTGMKQNVRLKDIPATVKIIDYKELKARAADQWLSAISYV CCCCHHHCCCEEEEECCCCCCCCCCCCCEEEECCCEEEEEEHHHHHHHHHHHHHHHHHHC PGIFVIQNYGGFNTLTIRGLDSRNTLLLKDGARDDTFLIQNSSPMSNLTNVERIEILKGP CCEEEEECCCCEEEEEEEECCCCCEEEEECCCCCCEEEEECCCCCCCCCCCEEEEEEECC NSVLYGQGAMAGVIHIITKKPQKKAGYEFSFTKGNFGSKRAYVGATGPIGTESLRYRIDA CCEEECCCCHHEEEEEEECCCCHHCCCEEEEECCCCCCCEEEEECCCCCCCCCEEEEEEC ATSEYQGFRKNSYNLNNISTSFEWDISVKHTLSILSGKNFDFIKPDAGLPKSKKPNIDLI CCHHHCCCCCCCCCCCCCCCEEEEEEEHHHEEHHHCCCCCCEECCCCCCCCCCCCCEEEE APGVYLNNNYNTKEDYLKNESGNFKIQLDSKFSNKLSMKSFISYLPQTYYYFSAEDLTIS ECCEEECCCCCCHHHHHCCCCCCEEEEECCCCCCCHHHHHHHHHCCCEEEEEEECCEEEE SRDENTIERDHFHFETKRSPLQGTVELQCIFQTGFKHKLLSGYEYHWMVSRHRQRYFPIG CCCCCCCCCCCEEEECCCCCCCCEEEEEEEEECCCCHHHHCCCEEEEEEECCCCCCCCCC STNINVLYPQIDLTQSLPVNFKDRKILYQQMHSLYFQDLMELSKIIKFVLGGRYDSWVRE CCCEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH NVTEKLSDWNDRYVSKPEDRTIHRFDAKVFTYRLGLVYQPLHYYTAYVGYSTAFIPVTFI HHHHHHHCCCHHCCCCCCCCCEEHCCCEEEEEEECCEECCHHHHHHHHCCCEEEEEEEEE NIKGNQLKPEMGEQIELGQRLEFAKGKIQLTSALFAAKKYDVAVRINSKPALYNQAGELR EEECCCCCCCCCCHHHHCCHHHHCCCEEEEHHHHHHHEEEEEEEEECCCCCCCCCCCCCC TNGYEFDIDLRLTQRWSLKSGYAHTIAEWESFRFVNSKGNEIDYKGNRPINVPRNTANLW CCCEEEEEEEEEEECCCCCCCCHHHHHHHHHEEEECCCCCEEECCCCCCCCCCCCCCCEE TTYTFASGLGFGLGGRYIDSIAGDNANSFSIPPYGLYDASLYYQYKHFRFQINCNNISNK EEEEECCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEEEEEEEEECCCCCC KYFISSTPNPTPGPPRQFLFTASAKF EEEEECCCCCCCCCCCEEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8576065 [H]