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The map label for this gene is sufD [C]

Identifier: 45656530

GI number: 45656530

Start: 771302

End: 772525

Strand: Direct

Name: sufD [C]

Synonym: LIC10632

Alternate gene names: 45656530

Gene position: 771302-772525 (Clockwise)

Preceding gene: 45656529

Following gene: 45656531

Centisome position: 18.03

GC content: 37.34

Gene sequence:

>1224_bases
TTGCAGAATCGAAAGACTGAAACAAAACTGTCTTTGGAAAATCAGTTTGAGAGATTTGTTTCTCAAAGTAAGGAACCTCA
GGCACTGAAAGATTTTCGTAAGAAGGTTTTTGCCAAATTTCAAACTCTGAAAATTCCCGGCTCAGAAAACGAATCCTGGA
GAAAAATACCTCTTTCTAATTTTCATCCGGAAGATTTTACCGAAGTTCCAGATTTTGCTGCCGTAGTTTGGAAAATTCCG
GATTTGGTTAAACTACAAAGATCGGAAACGCTTTCCGGAAAAGAATTGGAAAACTTTTTAAATATTCTGGAAGGTATATT
CCAAAAACAGAATGAAGAATGGTTTACCCTCTATAGTCTTTCTAATTTTACTCATGGACTTTATCTCGAAATAGGAAACG
ACTTTGTAGTTCAGGAAGAAATTGAAATCAAATTTCGTCTTGAAAAAGAGAACAAGATTTTACCTTTGATTGTAGCTAAA
ATTGGAAGTCATAACAAAATATTGATTGTCGAACGTTACGAATGCATCGAAGAACAAGAATTAAAATTTTTCCAGGGACT
TTCCGTTTTACAGACTGGAGCCGGTTCTAAAGTATCTTATGTAGGGATCGAGTCTTTTGGATCTTCTATATTCCATTTTC
AGAATTTATTTTCTGATCAAAGAGAGGATTCGGACTTAAAAATAGCAAAAGTTACTCCAGGCGGTTACAAGGGAAAAAAT
TTACTCAACGTAGATCTTTCTGGAAAAGGCGCAAGAGCCAGAGTGATCGGACTCGCTCCAATGGCCGCGAGGGAATTTCA
AGATTCAGAAGTAAAAATCGTTCACAATGAAAGTCATACGGAAAGTTCAATTCTTTATCGAAGCGCTTTGAAAAATAAGG
CACATCACATCTTTACAGGAAATTTACGAATTCCTAATTCTTGCAAGGACGTAAACGCAATTCAAATCAACAATAATCTA
CTTCTCAACAGAACTTCAAGAGCGGAATCGATTCCTAAACTGGAAGTATATGCAGAAAATGTCAAATGCGAGCACGGGGC
CACCGTGGGAGAGATTGACGAAGAACAACTTTTCTATCTCGCTTCTAGAGGAATCGATGAGGATGAGGCTAGAAGAATGA
TTGTGGACGGATTTTTGGGCCAAGTGATTGGTGAAATCGAATCGAATTCCATACAAGAAGAGCTATTTCGGTTAATTGCT
AGAAAAGTGGAGGGGGCTATATGA

Upstream 100 bases:

>100_bases
ACGCCCGATTTTGTTCACGTATTTGCAAAAGGAAAAATCTTAAAAACAGGAACAAGAGAACTCGCGCTCGAATTGGAAGA
AAAAGGATATGACTGGATCC

Downstream 100 bases:

>100_bases
GCTTTCGTAAACTCGCAAAACTGTCCGAAATAGAAAACGGGAAAGTCAAAGTAATTGAAACCAGATATAATAGAATTGGG
ATTACAAGTTTAGACGGAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 407; Mature: 407

Protein sequence:

>407_residues
MQNRKTETKLSLENQFERFVSQSKEPQALKDFRKKVFAKFQTLKIPGSENESWRKIPLSNFHPEDFTEVPDFAAVVWKIP
DLVKLQRSETLSGKELENFLNILEGIFQKQNEEWFTLYSLSNFTHGLYLEIGNDFVVQEEIEIKFRLEKENKILPLIVAK
IGSHNKILIVERYECIEEQELKFFQGLSVLQTGAGSKVSYVGIESFGSSIFHFQNLFSDQREDSDLKIAKVTPGGYKGKN
LLNVDLSGKGARARVIGLAPMAAREFQDSEVKIVHNESHTESSILYRSALKNKAHHIFTGNLRIPNSCKDVNAIQINNNL
LLNRTSRAESIPKLEVYAENVKCEHGATVGEIDEEQLFYLASRGIDEDEARRMIVDGFLGQVIGEIESNSIQEELFRLIA
RKVEGAI

Sequences:

>Translated_407_residues
MQNRKTETKLSLENQFERFVSQSKEPQALKDFRKKVFAKFQTLKIPGSENESWRKIPLSNFHPEDFTEVPDFAAVVWKIP
DLVKLQRSETLSGKELENFLNILEGIFQKQNEEWFTLYSLSNFTHGLYLEIGNDFVVQEEIEIKFRLEKENKILPLIVAK
IGSHNKILIVERYECIEEQELKFFQGLSVLQTGAGSKVSYVGIESFGSSIFHFQNLFSDQREDSDLKIAKVTPGGYKGKN
LLNVDLSGKGARARVIGLAPMAAREFQDSEVKIVHNESHTESSILYRSALKNKAHHIFTGNLRIPNSCKDVNAIQINNNL
LLNRTSRAESIPKLEVYAENVKCEHGATVGEIDEEQLFYLASRGIDEDEARRMIVDGFLGQVIGEIESNSIQEELFRLIA
RKVEGAI
>Mature_407_residues
MQNRKTETKLSLENQFERFVSQSKEPQALKDFRKKVFAKFQTLKIPGSENESWRKIPLSNFHPEDFTEVPDFAAVVWKIP
DLVKLQRSETLSGKELENFLNILEGIFQKQNEEWFTLYSLSNFTHGLYLEIGNDFVVQEEIEIKFRLEKENKILPLIVAK
IGSHNKILIVERYECIEEQELKFFQGLSVLQTGAGSKVSYVGIESFGSSIFHFQNLFSDQREDSDLKIAKVTPGGYKGKN
LLNVDLSGKGARARVIGLAPMAAREFQDSEVKIVHNESHTESSILYRSALKNKAHHIFTGNLRIPNSCKDVNAIQINNNL
LLNRTSRAESIPKLEVYAENVKCEHGATVGEIDEEQLFYLASRGIDEDEARRMIVDGFLGQVIGEIESNSIQEELFRLIA
RKVEGAI

Specific function: FhuF function [C]

COG id: COG0719

COG function: function code O; ABC-type transport system involved in Fe-S cluster assembly, permease component

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0051 (ycf24) family [H]

Homologues:

Organism=Escherichia coli, GI1787971, Length=202, Percent_Identity=28.7128712871287, Blast_Score=109, Evalue=2e-25,
Organism=Escherichia coli, GI87081955, Length=141, Percent_Identity=26.241134751773, Blast_Score=66, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000825
- InterPro:   IPR011542 [H]

Pfam domain/function: PF01458 UPF0051 [H]

EC number: NA

Molecular weight: Translated: 46359; Mature: 46359

Theoretical pI: Translated: 5.91; Mature: 5.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQNRKTETKLSLENQFERFVSQSKEPQALKDFRKKVFAKFQTLKIPGSENESWRKIPLSN
CCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEEECCCCCCCCEEECCCCC
FHPEDFTEVPDFAAVVWKIPDLVKLQRSETLSGKELENFLNILEGIFQKQNEEWFTLYSL
CCCCCCCCCCHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEE
SNFTHGLYLEIGNDFVVQEEIEIKFRLEKENKILPLIVAKIGSHNKILIVERYECIEEQE
CCCCCEEEEEECCCEEEEEEEEEEEEECCCCCEEEEEEEECCCCCEEEEEEHHHHCCHHH
LKFFQGLSVLQTGAGSKVSYVGIESFGSSIFHFQNLFSDQREDSDLKIAKVTPGGYKGKN
HHHHHCHHHHHCCCCCEEEEEEHHHHCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCE
LLNVDLSGKGARARVIGLAPMAAREFQDSEVKIVHNESHTESSILYRSALKNKAHHIFTG
EEEEEECCCCCEEEEEEECCHHHHHCCCCCEEEEECCCCCHHHHHHHHHHCCCCCEEEEC
NLRIPNSCKDVNAIQINNNLLLNRTSRAESIPKLEVYAENVKCEHGATVGEIDEEQLFYL
CEECCCCCCCCCEEEECCCEEEEECHHHCCCCEEEEEECCEEECCCCCCCCCCHHHHHHH
ASRGIDEDEARRMIVDGFLGQVIGEIESNSIQEELFRLIARKVEGAI
HHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MQNRKTETKLSLENQFERFVSQSKEPQALKDFRKKVFAKFQTLKIPGSENESWRKIPLSN
CCCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHEEECCCCCCCCEEECCCCC
FHPEDFTEVPDFAAVVWKIPDLVKLQRSETLSGKELENFLNILEGIFQKQNEEWFTLYSL
CCCCCCCCCCHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCEEEEEEE
SNFTHGLYLEIGNDFVVQEEIEIKFRLEKENKILPLIVAKIGSHNKILIVERYECIEEQE
CCCCCEEEEEECCCEEEEEEEEEEEEECCCCCEEEEEEEECCCCCEEEEEEHHHHCCHHH
LKFFQGLSVLQTGAGSKVSYVGIESFGSSIFHFQNLFSDQREDSDLKIAKVTPGGYKGKN
HHHHHCHHHHHCCCCCEEEEEEHHHHCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCE
LLNVDLSGKGARARVIGLAPMAAREFQDSEVKIVHNESHTESSILYRSALKNKAHHIFTG
EEEEEECCCCCEEEEEEECCHHHHHCCCCCEEEEECCCCCHHHHHHHHHHCCCCCEEEEC
NLRIPNSCKDVNAIQINNNLLLNRTSRAESIPKLEVYAENVKCEHGATVGEIDEEQLFYL
CEECCCCCCCCCEEEECCCEEEEECHHHCCCCEEEEEECCEEECCCCCCCCCCHHHHHHH
ASRGIDEDEARRMIVDGFLGQVIGEIESNSIQEELFRLIARKVEGAI
HHCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]