Click here to switch to the map view.

The map label for this gene is dps

Identifier: 45656504

GI number: 45656504

Start: 741539

End: 742057

Strand: Reverse

Name: dps

Synonym: LIC10606

Alternate gene names: NA

Gene position: 742057-741539 (Counterclockwise)

Preceding gene: 45656505

Following gene: 45656500

Centisome position: 17.35

GC content: 38.73

Gene sequence:

>519_bases
ATGTTTTCGGTCTATTATAAACAGGGGGATTTGTATATGAAAGAAATAGATATAGGAATATCCGAAAAAAATAGGGAAGC
AATCAACTCGGGATTGCAAAAACTTTTAGCTGATACTTACATTTTATATTTTAAAACGCATAGTTATCACTGGAACGTCA
CCGGTCCACAATTTAACACTCTTCACCAGATGTTTCAAACTCAATATAACGAACTCTGGCTTTCTATCGATCTGATTGCT
GAAAGGATCCGTGCTCTTGGTTTTTACGCACCTAGCTCTTCTCATCAATTAGGAAAGTTGACTTCGATTCATGAAGAAGG
TGGAGTTCCTCACGCGGATGATATGATTCGTCATTTGGTTAGCGGTCATGAAACCGTTATTAGAACCGCTCGTTCTTTAC
TTCCTGCTGCTGACGAAGGTGGAGACGAAGTGACCTTAGATCTTTTGACCCAAAGATTAGAAGTACATGAAAAAACGGCT
TGGATGCTTCGTAGTCTTTTATTCGTCGATAACACTTAA

Upstream 100 bases:

>100_bases
AAAAAACTTTTTTTGACCGGTAACTCTAAAATATGACAGTGAACAACCGATGGATTGAAATATGTTTTTGGACAAGTGAT
AAGTTTTTTCTTGTTCTTTT

Downstream 100 bases:

>100_bases
AATTGTAACGAAAATTTTTCGATTTCAATGGAAGTTGTATCTATTCAATAAGTTGCAAAAGTCGCTTTATTTTGTGGAAA
GATATTACAAATCTGCAATG

Product: DNA-binding stress protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 172; Mature: 172

Protein sequence:

>172_residues
MFSVYYKQGDLYMKEIDIGISEKNREAINSGLQKLLADTYILYFKTHSYHWNVTGPQFNTLHQMFQTQYNELWLSIDLIA
ERIRALGFYAPSSSHQLGKLTSIHEEGGVPHADDMIRHLVSGHETVIRTARSLLPAADEGGDEVTLDLLTQRLEVHEKTA
WMLRSLLFVDNT

Sequences:

>Translated_172_residues
MFSVYYKQGDLYMKEIDIGISEKNREAINSGLQKLLADTYILYFKTHSYHWNVTGPQFNTLHQMFQTQYNELWLSIDLIA
ERIRALGFYAPSSSHQLGKLTSIHEEGGVPHADDMIRHLVSGHETVIRTARSLLPAADEGGDEVTLDLLTQRLEVHEKTA
WMLRSLLFVDNT
>Mature_172_residues
MFSVYYKQGDLYMKEIDIGISEKNREAINSGLQKLLADTYILYFKTHSYHWNVTGPQFNTLHQMFQTQYNELWLSIDLIA
ERIRALGFYAPSSSHQLGKLTSIHEEGGVPHADDMIRHLVSGHETVIRTARSLLPAADEGGDEVTLDLLTQRLEVHEKTA
WMLRSLLFVDNT

Specific function: Unknown

COG id: COG0783

COG function: function code P; DNA-binding ferritin-like protein (oxidative damage protectant)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dps family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002177
- InterPro:   IPR023188
- InterPro:   IPR012347
- InterPro:   IPR009078
- InterPro:   IPR008331 [H]

Pfam domain/function: PF00210 Ferritin [H]

EC number: NA

Molecular weight: Translated: 19725; Mature: 19725

Theoretical pI: Translated: 6.01; Mature: 6.01

Prosite motif: PS00819 DPS_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSVYYKQGDLYMKEIDIGISEKNREAINSGLQKLLADTYILYFKTHSYHWNVTGPQFNT
CCEEEEECCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHEEEEEEECCEEEECCCCCHHH
LHQMFQTQYNELWLSIDLIAERIRALGFYAPSSSHQLGKLTSIHEEGGVPHADDMIRHLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHH
SGHETVIRTARSLLPAADEGGDEVTLDLLTQRLEVHEKTAWMLRSLLFVDNT
CCHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MFSVYYKQGDLYMKEIDIGISEKNREAINSGLQKLLADTYILYFKTHSYHWNVTGPQFNT
CCEEEEECCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHEEEEEEECCEEEECCCCCHHH
LHQMFQTQYNELWLSIDLIAERIRALGFYAPSSSHQLGKLTSIHEEGGVPHADDMIRHLV
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHH
SGHETVIRTARSLLPAADEGGDEVTLDLLTQRLEVHEKTAWMLRSLLFVDNT
CCHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]