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The map label for this gene is ylbK [H]

Identifier: 45656488

GI number: 45656488

Start: 721185

End: 722018

Strand: Reverse

Name: ylbK [H]

Synonym: LIC10590

Alternate gene names: 45656488

Gene position: 722018-721185 (Counterclockwise)

Preceding gene: 45656489

Following gene: 45656485

Centisome position: 16.88

GC content: 34.77

Gene sequence:

>834_bases
TTGCAATTTCACGTTAAACAAAAATTTACGGCTCTTACATTTAACTCGGCATTTTTTGGCTTTTACGCACATGCAGGTTT
TGCCAAAGGACTTTCCGAAATCGGTTTTCGTCCTTCTAAAATCACCGGTTGTAGTTCCGGAGCATTAATAGGTTCTCTCG
TTGCTGCGGGAATTCCTATTGATACCATGACTGATTTAATTTTGAATTTGAAAAAGAAAGATTTTTGGGAAGGAAATCTA
GTTACGAACTTTGTAAAACCCATTCGAAAAGGACTTAAAAATTATTCAGGAATTCTTTCCGGTAAAAATGTTAAAGAATT
ACTCAAACCTCATTTAGGTCATAAAAAAATCGAAGAACTTTCCATTCCGATGGGAATCTCTGTTTCAAACATCACAAAAC
AAATTCGAGAACTCAAAACAAAAGGAGATTTAATCGATCAGATTCTCGCTTCTATGACGTTTCCTTTTCTTTTCGAAATT
CAAAAGTTAGGGGAAGAAGAATTTATCGACGGGGGAGTTGCCGATCAAGAACCGATCAAAGAATTAATTCTAGATAAATC
TATTCATAAAATAGTGATTCATAGTATTCGCACTAAAAAAGGTCATTCTGAAAAGGCTATGATCCGCGCCTTCCATTCTT
CGGTCCAGATTATAGAAAATGAAACGAGAGAATTAAAAGAACTTCTCGCCAAACATTACAAAAAGAGAATATTGAGAATA
GAAACTTTGACTCCTTATATAGACGCAAACCAACTCAGACATGGTAAAGAGGCGATGGAAGAAGGTAGAAAAAGTGCTCA
TCACTGGAAGAAAAAAATTTTATCTAAAATTTGA

Upstream 100 bases:

>100_bases
TATAGTAAGCCTACCTTTATTAGAAGGAAATAAGGATTATTTTTCATGGATCTACAGCGAAGTGCTCGCAGATTAAAATA
CATTCAAAAAAGGTTATATT

Downstream 100 bases:

>100_bases
TTTGTCCTAACGATCTCTATAAAATTGAGTATTTTACTTGTATCTTATTATCCGAACGCTTGAAAACAATTTTAAAAATG
AACGGTCTATTTTGCAATGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 277; Mature: 277

Protein sequence:

>277_residues
MQFHVKQKFTALTFNSAFFGFYAHAGFAKGLSEIGFRPSKITGCSSGALIGSLVAAGIPIDTMTDLILNLKKKDFWEGNL
VTNFVKPIRKGLKNYSGILSGKNVKELLKPHLGHKKIEELSIPMGISVSNITKQIRELKTKGDLIDQILASMTFPFLFEI
QKLGEEEFIDGGVADQEPIKELILDKSIHKIVIHSIRTKKGHSEKAMIRAFHSSVQIIENETRELKELLAKHYKKRILRI
ETLTPYIDANQLRHGKEAMEEGRKSAHHWKKKILSKI

Sequences:

>Translated_277_residues
MQFHVKQKFTALTFNSAFFGFYAHAGFAKGLSEIGFRPSKITGCSSGALIGSLVAAGIPIDTMTDLILNLKKKDFWEGNL
VTNFVKPIRKGLKNYSGILSGKNVKELLKPHLGHKKIEELSIPMGISVSNITKQIRELKTKGDLIDQILASMTFPFLFEI
QKLGEEEFIDGGVADQEPIKELILDKSIHKIVIHSIRTKKGHSEKAMIRAFHSSVQIIENETRELKELLAKHYKKRILRI
ETLTPYIDANQLRHGKEAMEEGRKSAHHWKKKILSKI
>Mature_277_residues
MQFHVKQKFTALTFNSAFFGFYAHAGFAKGLSEIGFRPSKITGCSSGALIGSLVAAGIPIDTMTDLILNLKKKDFWEGNL
VTNFVKPIRKGLKNYSGILSGKNVKELLKPHLGHKKIEELSIPMGISVSNITKQIRELKTKGDLIDQILASMTFPFLFEI
QKLGEEEFIDGGVADQEPIKELILDKSIHKIVIHSIRTKKGHSEKAMIRAFHSSVQIIENETRELKELLAKHYKKRILRI
ETLTPYIDANQLRHGKEAMEEGRKSAHHWKKKILSKI

Specific function: Unknown

COG id: COG1752

COG function: function code R; Predicted esterase of the alpha-beta hydrolase superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 patatin domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016035
- InterPro:   IPR001423
- InterPro:   IPR002641 [H]

Pfam domain/function: PF01734 Patatin [H]

EC number: NA

Molecular weight: Translated: 31284; Mature: 31284

Theoretical pI: Translated: 10.42; Mature: 10.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure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HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]