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The map label for this gene is yqeV [H]

Identifier: 45656240

GI number: 45656240

Start: 381235

End: 382548

Strand: Reverse

Name: yqeV [H]

Synonym: LIC10336

Alternate gene names: 45656240

Gene position: 382548-381235 (Counterclockwise)

Preceding gene: 45656241

Following gene: 45656235

Centisome position: 8.94

GC content: 38.58

Gene sequence:

>1314_bases
ATGCATTCTCCAATAGCTGAACAAACTGTTCTTTTTAACACTCTAGGTTGTAGACTCAATTTTTTCGAGTCAGACGGTTT
ATTTGCCTCTCTTTCAAAACACGGTTATCGTTCTGCAAAATCGGAAGAACATCCTGAAGTAGTGATCATCAATACGTGTA
CGGTAACCAATAAAGCGGATTCTAAAAATAGAAATACGATTCGAAACGCGATTAAAAAATTTCCAGGTTCTCAAATATGG
GTCACTGGTTGTTACGCGGAAACCGATCGAGAATCCATCGAAGCAATTCCAGGTGTAGCCGGAGTTGTAGGAAATACGGA
AAAGTCCAAACTCCCCGCGATGATTCTCGAAAAGAGAGGATTGATCGAAGAAAGCGAACTCGTCGGAAAAATTTTTGATC
GTTTTTCTTACTCGGACGTTTTACCGAACGGTCATACACGTGCTTATCTAAAAATCCAAGACGGTTGTAATCGTAAATGT
TCTTATTGTAAAATTCCCCAGGCACGTGGACTGGGAGTCAGCCGGAATTATCAAGACGTTTTAGATCAGGTTCGATTTCT
ACAAGATAACGGAGTCGGTGAAATCGTTTTGACTGGTGTCAATCTAGGTTGGTATCGAGACTCCGAAAATAAAAAAGCAT
TTAACAAGATCCTTGGAGAAATATTAAATATTTTAGAATATTCAAGAATTCGAATTTCTTCTATCGAACCTCCTGACGTA
GGAAATGAATTAGTAGAGCTGATGACTCACCCTCGTTTTACTCCATTTCTCCATATTCCGTTACAAAGTGGAAACTCCGA
AATTCTAAAGAAAATGAAACGTACTTATACTCCAGAGACTTTTCGAAAACGTGTAGAAATTGCTAAAGAAAAAATTCCAA
ATTTGTTTTTGGGAACCGACATTATCGTAGGTTTTCCTGGCGAAACCGAAGAAATGTTTCAAGACAGTGTTTCTATGATT
CGCGATCTAGGTTTTGCTAAAATCCATACATTTCCTTTTTCCGTAAGAAGAAATACATTAGCCGAAACATTTCCGGATTC
GGTTAGTAAAGAGATCAAAAAGGAAAGAGTTCACACACTCAACTCTTTGTCGAGAGAGTTACATCAAAAATACGCGTTAT
CCGAAATTGAAAAGGTTCGAGAAGCAATTTTAGAACAAGGTGGAATTGCGGTTACGGACAATTATCTCAAAGTAAAACTT
TCCGACACCGAGCTGAAAAATCTCAAAGTGGGTCAGTTTTTGAACGTAAAACTTCTGCAATACGAACCCGAAGCGGATAA
AGAGGGAACGTTTATCGGACGTGTGTTTCGTTAG

Upstream 100 bases:

>100_bases
TTTTTGAATTCCGCAAAAGAACAGATTGAATCTGCCTTAAAACTAGAACCTGAAAATTCTCATTTTAAAAATAACCTAAA
AAGAATCGAAGCCAAACTCA

Downstream 100 bases:

>100_bases
ATCGGAATATTTATTATCATTTACTAAACTATTAGTTAACCTGATTTTTAATTTTGGCTCAACAAATCGATTTTTAAACT
TTGAAATCCATCACCAAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 437; Mature: 437

Protein sequence:

>437_residues
MHSPIAEQTVLFNTLGCRLNFFESDGLFASLSKHGYRSAKSEEHPEVVIINTCTVTNKADSKNRNTIRNAIKKFPGSQIW
VTGCYAETDRESIEAIPGVAGVVGNTEKSKLPAMILEKRGLIEESELVGKIFDRFSYSDVLPNGHTRAYLKIQDGCNRKC
SYCKIPQARGLGVSRNYQDVLDQVRFLQDNGVGEIVLTGVNLGWYRDSENKKAFNKILGEILNILEYSRIRISSIEPPDV
GNELVELMTHPRFTPFLHIPLQSGNSEILKKMKRTYTPETFRKRVEIAKEKIPNLFLGTDIIVGFPGETEEMFQDSVSMI
RDLGFAKIHTFPFSVRRNTLAETFPDSVSKEIKKERVHTLNSLSRELHQKYALSEIEKVREAILEQGGIAVTDNYLKVKL
SDTELKNLKVGQFLNVKLLQYEPEADKEGTFIGRVFR

Sequences:

>Translated_437_residues
MHSPIAEQTVLFNTLGCRLNFFESDGLFASLSKHGYRSAKSEEHPEVVIINTCTVTNKADSKNRNTIRNAIKKFPGSQIW
VTGCYAETDRESIEAIPGVAGVVGNTEKSKLPAMILEKRGLIEESELVGKIFDRFSYSDVLPNGHTRAYLKIQDGCNRKC
SYCKIPQARGLGVSRNYQDVLDQVRFLQDNGVGEIVLTGVNLGWYRDSENKKAFNKILGEILNILEYSRIRISSIEPPDV
GNELVELMTHPRFTPFLHIPLQSGNSEILKKMKRTYTPETFRKRVEIAKEKIPNLFLGTDIIVGFPGETEEMFQDSVSMI
RDLGFAKIHTFPFSVRRNTLAETFPDSVSKEIKKERVHTLNSLSRELHQKYALSEIEKVREAILEQGGIAVTDNYLKVKL
SDTELKNLKVGQFLNVKLLQYEPEADKEGTFIGRVFR
>Mature_437_residues
MHSPIAEQTVLFNTLGCRLNFFESDGLFASLSKHGYRSAKSEEHPEVVIINTCTVTNKADSKNRNTIRNAIKKFPGSQIW
VTGCYAETDRESIEAIPGVAGVVGNTEKSKLPAMILEKRGLIEESELVGKIFDRFSYSDVLPNGHTRAYLKIQDGCNRKC
SYCKIPQARGLGVSRNYQDVLDQVRFLQDNGVGEIVLTGVNLGWYRDSENKKAFNKILGEILNILEYSRIRISSIEPPDV
GNELVELMTHPRFTPFLHIPLQSGNSEILKKMKRTYTPETFRKRVEIAKEKIPNLFLGTDIIVGFPGETEEMFQDSVSMI
RDLGFAKIHTFPFSVRRNTLAETFPDSVSKEIKKERVHTLNSLSRELHQKYALSEIEKVREAILEQGGIAVTDNYLKVKL
SDTELKNLKVGQFLNVKLLQYEPEADKEGTFIGRVFR

Specific function: Unknown

COG id: COG0621

COG function: function code J; 2-methylthioadenine synthetase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 TRAM domain [H]

Homologues:

Organism=Homo sapiens, GI28872784, Length=401, Percent_Identity=28.1795511221945, Blast_Score=156, Evalue=4e-38,
Organism=Homo sapiens, GI28872782, Length=401, Percent_Identity=28.1795511221945, Blast_Score=155, Evalue=6e-38,
Organism=Homo sapiens, GI93277076, Length=379, Percent_Identity=28.4960422163588, Blast_Score=148, Evalue=9e-36,
Organism=Escherichia coli, GI1786882, Length=434, Percent_Identity=29.4930875576037, Blast_Score=172, Evalue=4e-44,
Organism=Escherichia coli, GI1787057, Length=392, Percent_Identity=27.8061224489796, Blast_Score=147, Evalue=1e-36,
Organism=Caenorhabditis elegans, GI17553146, Length=470, Percent_Identity=26.3829787234043, Blast_Score=163, Evalue=1e-40,
Organism=Caenorhabditis elegans, GI71996771, Length=281, Percent_Identity=28.8256227758007, Blast_Score=119, Evalue=3e-27,
Organism=Drosophila melanogaster, GI21356207, Length=469, Percent_Identity=28.1449893390192, Blast_Score=182, Evalue=5e-46,
Organism=Drosophila melanogaster, GI19922432, Length=371, Percent_Identity=28.5714285714286, Blast_Score=144, Evalue=1e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006638
- InterPro:   IPR005839
- InterPro:   IPR020612
- InterPro:   IPR013848
- InterPro:   IPR006467
- InterPro:   IPR007197
- InterPro:   IPR002792 [H]

Pfam domain/function: PF04055 Radical_SAM; PF01938 TRAM; PF00919 UPF0004 [H]

EC number: NA

Molecular weight: Translated: 49498; Mature: 49498

Theoretical pI: Translated: 8.53; Mature: 8.53

Prosite motif: PS01278 UPF0004

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHSPIAEQTVLFNTLGCRLNFFESDGLFASLSKHGYRSAKSEEHPEVVIINTCTVTNKAD
CCCCHHHHHHHHHHHCCEEEEEECCCCEEHHHHHCCCCCCCCCCCCEEEEEEEEECCCCC
SKNRNTIRNAIKKFPGSQIWVTGCYAETDRESIEAIPGVAGVVGNTEKSKLPAMILEKRG
CCCHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHCCCCHHHCCCCCHHHCHHHHHHHCC
LIEESELVGKIFDRFSYSDVLPNGHTRAYLKIQDGCNRKCSYCKIPQARGLGVSRNYQDV
CCCHHHHHHHHHHHCCHHHCCCCCCCEEEEEECCCCCCCCCEECCCCCCCCCCCCCHHHH
LDQVRFLQDNGVGEIVLTGVNLGWYRDSENKKAFNKILGEILNILEYSRIRISSIEPPDV
HHHHHHHHCCCCCEEEEEECEEEEEECCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCC
GNELVELMTHPRFTPFLHIPLQSGNSEILKKMKRTYTPETFRKRVEIAKEKIPNLFLGTD
HHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEECCE
IIVGFPGETEEMFQDSVSMIRDLGFAKIHTFPFSVRRNTLAETFPDSVSKEIKKERVHTL
EEEECCCCHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHCCHHHHHHHHHHHHHHH
NSLSRELHQKYALSEIEKVREAILEQGGIAVTDNYLKVKLSDTELKNLKVGQFLNVKLLQ
HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCEEEEEECCCCCCCCCCCCEEEEEEEE
YEPEADKEGTFIGRVFR
ECCCCCCCCCEEEEECC
>Mature Secondary Structure
MHSPIAEQTVLFNTLGCRLNFFESDGLFASLSKHGYRSAKSEEHPEVVIINTCTVTNKAD
CCCCHHHHHHHHHHHCCEEEEEECCCCEEHHHHHCCCCCCCCCCCCEEEEEEEEECCCCC
SKNRNTIRNAIKKFPGSQIWVTGCYAETDRESIEAIPGVAGVVGNTEKSKLPAMILEKRG
CCCHHHHHHHHHHCCCCEEEEEEEECCCCHHHHHHCCCCHHHCCCCCHHHCHHHHHHHCC
LIEESELVGKIFDRFSYSDVLPNGHTRAYLKIQDGCNRKCSYCKIPQARGLGVSRNYQDV
CCCHHHHHHHHHHHCCHHHCCCCCCCEEEEEECCCCCCCCCEECCCCCCCCCCCCCHHHH
LDQVRFLQDNGVGEIVLTGVNLGWYRDSENKKAFNKILGEILNILEYSRIRISSIEPPDV
HHHHHHHHCCCCCEEEEEECEEEEEECCCCHHHHHHHHHHHHHHHHHCCEEECCCCCCCC
GNELVELMTHPRFTPFLHIPLQSGNSEILKKMKRTYTPETFRKRVEIAKEKIPNLFLGTD
HHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHCCCCHHHHHHHHHHHHHCCCEEECCE
IIVGFPGETEEMFQDSVSMIRDLGFAKIHTFPFSVRRNTLAETFPDSVSKEIKKERVHTL
EEEECCCCHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHCCHHHHHHHHHHHHHHH
NSLSRELHQKYALSEIEKVREAILEQGGIAVTDNYLKVKLSDTELKNLKVGQFLNVKLLQ
HHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCEEEEEECCCCCCCCCCCCEEEEEEEE
YEPEADKEGTFIGRVFR
ECCCCCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969508; 9023197; 9384377 [H]