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The map label for this gene is 45656241

Identifier: 45656241

GI number: 45656241

Start: 382529

End: 383638

Strand: Reverse

Name: 45656241

Synonym: LIC10337

Alternate gene names: NA

Gene position: 383638-382529 (Counterclockwise)

Preceding gene: 45656242

Following gene: 45656240

Centisome position: 8.97

GC content: 36.04

Gene sequence:

>1110_bases
ATGTCAATTTGCAAGTTTCGATTTTTACAATACACCCTAGTCTTAAATTTGTTCCAAAATCTAAAAACAACTTGGCAGAA
ATTTCTACAGATCCAACCTCCTCAGTTTCCTTTTATGGTTTTAAACAACTTTTTCGCTTGGAAGTTCTCGTATGAGTTCC
CACATATTTTTAATTTTAGGATAAACTTTTTATCAATGATATTAGACCACGAAGGCCAGTCTTATAACCGTACGTCTCGA
TTTTCATCTTCATTACTAAAATCTAAAAATCGATTGATCGAAAACAAAACGTCAGGTATCAAAGGCGGCATTTTTTATTC
CTTTAGGAATCAATTCTTATTTCTTTTACTGAGCCTATTGGTTCTAACTCATTCTCCCCTTCTACTGGCTCAAACAAACG
AAGATTATTCTATTGCTCTGAAAGAATTCGAAACCAAAAACTACGAGAAATCTCTTGAGATTATTCGAGTTTTACATGAA
CAAGGAAAACGTTCTTACGAAACACATTACCTCGCGGGGCACTGTCATTTTGCTTTGGGAAGAATTAAGTCCGCAGGTTC
ACATTGGTCCGAGGCTCTTTCAATGAAACCGGGAGATCCAGCGGTCAGTTTAGATTATTCTAGATTTCTTTTAAACAACG
GAAGAGAAGACGACGGTTTATTAGTAATCGCTCGCGCGTATGAACTCAATCCGAGGAATAAAGACATACGTCTTCTTTTT
GGAACGGCTCTTCTTTATAACGGTAAAGCAAGAGATGCTTTGAACATCACCGAAAAATTAAAGGCCGAAGATTCCAACGA
CTATCGTCCCTTGGTTTTAGAAGGACAGATTTATTATTATCTTGGAAATATTGAAAAAGCGGAAGTCAGTTTGAAATGGG
CGAACTCTCTTGTTCCGAATAACGCAAACGTGTTGAACAATCTAGCTTTAGTTTACGAGAAAGCTTCCAATCAGGAAAAT
AAAAAAGGCAAATATGGAAACGCTAAGAATTTTTTGAATTCCGCAAAAGAACAGATTGAATCTGCCTTAAAACTAGAACC
TGAAAATTCTCATTTTAAAAATAACCTAAAAAGAATCGAAGCCAAACTCAATGCATTCTCCAATAGCTGA

Upstream 100 bases:

>100_bases
TGTTTATATTGATCCTGTGGAACCGTTTCATTCTCTTATTGATTGTATTAATGCGAAGTCTATGAGTATGACCGCCTAAA
AATTTTAGAAGAGTACCAGA

Downstream 100 bases:

>100_bases
ACAAACTGTTCTTTTTAACACTCTAGGTTGTAGACTCAATTTTTTCGAGTCAGACGGTTTATTTGCCTCTCTTTCAAAAC
ACGGTTATCGTTCTGCAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 369; Mature: 368

Protein sequence:

>369_residues
MSICKFRFLQYTLVLNLFQNLKTTWQKFLQIQPPQFPFMVLNNFFAWKFSYEFPHIFNFRINFLSMILDHEGQSYNRTSR
FSSSLLKSKNRLIENKTSGIKGGIFYSFRNQFLFLLLSLLVLTHSPLLLAQTNEDYSIALKEFETKNYEKSLEIIRVLHE
QGKRSYETHYLAGHCHFALGRIKSAGSHWSEALSMKPGDPAVSLDYSRFLLNNGREDDGLLVIARAYELNPRNKDIRLLF
GTALLYNGKARDALNITEKLKAEDSNDYRPLVLEGQIYYYLGNIEKAEVSLKWANSLVPNNANVLNNLALVYEKASNQEN
KKGKYGNAKNFLNSAKEQIESALKLEPENSHFKNNLKRIEAKLNAFSNS

Sequences:

>Translated_369_residues
MSICKFRFLQYTLVLNLFQNLKTTWQKFLQIQPPQFPFMVLNNFFAWKFSYEFPHIFNFRINFLSMILDHEGQSYNRTSR
FSSSLLKSKNRLIENKTSGIKGGIFYSFRNQFLFLLLSLLVLTHSPLLLAQTNEDYSIALKEFETKNYEKSLEIIRVLHE
QGKRSYETHYLAGHCHFALGRIKSAGSHWSEALSMKPGDPAVSLDYSRFLLNNGREDDGLLVIARAYELNPRNKDIRLLF
GTALLYNGKARDALNITEKLKAEDSNDYRPLVLEGQIYYYLGNIEKAEVSLKWANSLVPNNANVLNNLALVYEKASNQEN
KKGKYGNAKNFLNSAKEQIESALKLEPENSHFKNNLKRIEAKLNAFSNS
>Mature_368_residues
SICKFRFLQYTLVLNLFQNLKTTWQKFLQIQPPQFPFMVLNNFFAWKFSYEFPHIFNFRINFLSMILDHEGQSYNRTSRF
SSSLLKSKNRLIENKTSGIKGGIFYSFRNQFLFLLLSLLVLTHSPLLLAQTNEDYSIALKEFETKNYEKSLEIIRVLHEQ
GKRSYETHYLAGHCHFALGRIKSAGSHWSEALSMKPGDPAVSLDYSRFLLNNGREDDGLLVIARAYELNPRNKDIRLLFG
TALLYNGKARDALNITEKLKAEDSNDYRPLVLEGQIYYYLGNIEKAEVSLKWANSLVPNNANVLNNLALVYEKASNQENK
KGKYGNAKNFLNSAKEQIESALKLEPENSHFKNNLKRIEAKLNAFSNS

Specific function: Unknown

COG id: COG5010

COG function: function code U; Flp pilus assembly protein TadD, contains TPR repeats

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42628; Mature: 42497

Theoretical pI: Translated: 9.85; Mature: 9.85

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSICKFRFLQYTLVLNLFQNLKTTWQKFLQIQPPQFPFMVLNNFFAWKFSYEFPHIFNFR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCEEEEEEECCCCCEEHHH
INFLSMILDHEGQSYNRTSRFSSSLLKSKNRLIENKTSGIKGGIFYSFRNQFLFLLLSLL
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHH
VLTHSPLLLAQTNEDYSIALKEFETKNYEKSLEIIRVLHEQGKRSYETHYLAGHCHFALG
HHCCCCEEEEECCCCCEEEEHHHHCCCHHHHHHHHHHHHHHCCCCCCCEEEECHHHHHHH
RIKSAGSHWSEALSMKPGDPAVSLDYSRFLLNNGREDDGLLVIARAYELNPRNKDIRLLF
HHHHCCCHHHHHHCCCCCCCCEEECHHHHHHCCCCCCCCEEEEEEEEECCCCCCCEEEEE
GTALLYNGKARDALNITEKLKAEDSNDYRPLVLEGQIYYYLGNIEKAEVSLKWANSLVPN
EEEEEECCCCCCHHHHHHHHHCCCCCCCCCEEEECEEEEEECCCEEEEEEEEEHHCCCCC
NANVLNNLALVYEKASNQENKKGKYGNAKNFLNSAKEQIESALKLEPENSHFKNNLKRIE
CHHHHHHHHHEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
AKLNAFSNS
HHHHHCCCC
>Mature Secondary Structure 
SICKFRFLQYTLVLNLFQNLKTTWQKFLQIQPPQFPFMVLNNFFAWKFSYEFPHIFNFR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCEEEEEEECCCCCEEHHH
INFLSMILDHEGQSYNRTSRFSSSLLKSKNRLIENKTSGIKGGIFYSFRNQFLFLLLSLL
HHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCEEHHHHHHHHHHHHHHH
VLTHSPLLLAQTNEDYSIALKEFETKNYEKSLEIIRVLHEQGKRSYETHYLAGHCHFALG
HHCCCCEEEEECCCCCEEEEHHHHCCCHHHHHHHHHHHHHHCCCCCCCEEEECHHHHHHH
RIKSAGSHWSEALSMKPGDPAVSLDYSRFLLNNGREDDGLLVIARAYELNPRNKDIRLLF
HHHHCCCHHHHHHCCCCCCCCEEECHHHHHHCCCCCCCCEEEEEEEEECCCCCCCEEEEE
GTALLYNGKARDALNITEKLKAEDSNDYRPLVLEGQIYYYLGNIEKAEVSLKWANSLVPN
EEEEEECCCCCCHHHHHHHHHCCCCCCCCCEEEECEEEEEECCCEEEEEEEEEHHCCCCC
NANVLNNLALVYEKASNQENKKGKYGNAKNFLNSAKEQIESALKLEPENSHFKNNLKRIE
CHHHHHHHHHEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
AKLNAFSNS
HHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA