| Definition | Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130 chromosome chromosome I, complete sequence. |
|---|---|
| Accession | NC_005823 |
| Length | 4,277,185 |
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The map label for this gene is 45656067
Identifier: 45656067
GI number: 45656067
Start: 191388
End: 193487
Strand: Direct
Name: 45656067
Synonym: LIC10161
Alternate gene names: NA
Gene position: 191388-193487 (Clockwise)
Preceding gene: 45656066
Following gene: 45656068
Centisome position: 4.47
GC content: 35.48
Gene sequence:
>2100_bases ATGATATGGGCGCGGTGGGTTATGTCCAAATCTGAAAATCAAGTCCCGACTCCTGAAACCTTCGTTTTGAGTTCGGAGGA TACTCAGGATATGATCGGAGATCAGGAGCTTAAGGTTCTGATGCTTCAATATAATCCGGGCGCGTTTAAAGATATAGATT TGATTGAAAAAGGAGTGGAAAATTATTTCTTATTTAATCAATCTCCGTTTGCACTTACTAAAATTGAACAATTACAACAT CTTAAACTAAACGATCTTAAATTTTTAGAAGAAAGAAGGGGAATTCAATCTTATCAGTTTCTTCTATTTCAAAAAGAAAT CAGAGAACTTCAAATTGCAAATGTAATCATCCGTCCCGCTTCTTTAAAGGCAGATCAAATCGTAAAAGTTAAACGCGGTT GTGTTCTTCAAAGTGTGGCCGCAATTCTTGAAATGTTATACGCAAGAGATCAATTTATTTTGAATATTTCTAAAAATTCA GATGTAGAAGATTGGGTTCATCAAAATTATATCAACGTTGACGATAAGGGAATTCAAATCAATTTATCAGATTCTAAGTT TTTGGAAAAATCCATGCAAAATTTGGAATCCCTTTCTTTAGAATCTCTTTTAGATCGATTAAAGGTTCGAGGTGATTTAT TCAGTAATATTTTTCAAATTTTGAATCAAAAACCAGGAGAGATTTTAAATCAACTTTCTCTTATAAAAGTAGAACCCGAA GTTTTACCAGTTCTTGAAAAAAGAGGTTCTAGATCTCCTCTTTTACAATTACATCCTCGTTTTCATTTGTTTCAGCCTTC TTTTGAAGAACTTTTGAGTTTTAGACATACTTCCAAAGAAAAAAATGAACAAAACAAAAGTACGGAATTGGAAATTATAT TCGAATTATTTAATGTAATTGCACGTAAAATTCTTCTTCAAATTCTTCCTGGAGAAGAATCTTCTTGGATAGAATTGACA GGGCATTCTCAAGCTGAAAGATATTTACAGGAATTAAAAAAACATCCAGCTTTTACTTCCGGGAAAAGTTGGGCGGGCGG TGGAGATTTTATTAGATCTTACGAAGTTCTACTTCAAACAGTAAGAACTTTAGAACATCTTAAAAAAGAATCTTTGATCA ATCTAATTACCGGAGAGAATTTAGTTCGTTTTAAAGAATCTAAAGAACCAATCCATTTCGATCTTTCTAATTTTGAAGTA GATGATGCAAGTATCAAAAGTGTTGGTATGAGTAGGACCGAATTGTTTCGTGAGGTTTTAGAACGGATTCGATCCAGAGA AGACTTTCTAAAAAAAGAAAGAAAAGGTTCCGGAGGTGAAACGATTGGGTTGATGATCTTGGCGAAGAGTATGATTCTTC GGGCATTTATAGAAGTTCGCCAGAAAAGAACTTCGATTCATAACCTGATTCGCCAAAACGGATTTCCACGCGGAATTTAT GAATTTTTAAAAGAAGTTTCCGATGTAAAGGACGGTCAAGTTGCAGTAGACGAGCAGATTCGTTTGAGTAAGGCAATCGC GGAATGGGAAGAAGATACCGAAAAAGAAAGAATTCGTTCCGAAAGGGCTTCCAAGTCGATTTTAGAAAGGATCATCGAAT TCATTCTTAGTTTGTTCGGAATTAAAGTTGCTCCTAAAGAACGGGATACTACGAATAAGGGCCAAGTTAAGAAGGATTTT AAAAATATAGAATCGGATCATTCTTCTCAAGAGCCTTCCAAACCAAAAAAGAAAAAGTCTCTCGGAGTCATTGTCGGTCC AAAAGAAAAAGAGTTGATGATTCCTTCTCGAGTTCAAAAAGCGATCGACTATGTGGATCGTAAAAACAACGGATTAATTT GGTTGGATGAAGTTGTGGTTGCGATCTCTTCTCCGGAATTCGGAAAAGACAAAGTGGCTGACCTTATATACTATGACCAG AAGCGGAGATATATGGAAATCAGGGCCATGAACCAAGTTAGACACGTTTTTATACGAAAAGAGTTGGAATCAGATTCTGC TTGGATTCAAACCACTCTGGATTATCTTGATAATGTTTCTGCCAAAAAACCAGAGTTTTCCGCACTTGCGGATACTCTGA GACGATTCCAAAACGAATGA
Upstream 100 bases:
>100_bases CTTAGGGTTTCTTGTGGAATGGAATTTAATTTTTCAAGAATGAAAAATCTTACTTTGAAACAAAGAGTAATAGACTTTTC TAATTTTCTACAGTCCCTTT
Downstream 100 bases:
>100_bases AAATTACATTAGAATTTTATTAAATTCTAATATTTTATTTAAAAAGATTTTTTATTTCAATTAATATTTAAGTTTTCGGA GGATTCATGAAAACCAGAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 699; Mature: 699
Protein sequence:
>699_residues MIWARWVMSKSENQVPTPETFVLSSEDTQDMIGDQELKVLMLQYNPGAFKDIDLIEKGVENYFLFNQSPFALTKIEQLQH LKLNDLKFLEERRGIQSYQFLLFQKEIRELQIANVIIRPASLKADQIVKVKRGCVLQSVAAILEMLYARDQFILNISKNS DVEDWVHQNYINVDDKGIQINLSDSKFLEKSMQNLESLSLESLLDRLKVRGDLFSNIFQILNQKPGEILNQLSLIKVEPE VLPVLEKRGSRSPLLQLHPRFHLFQPSFEELLSFRHTSKEKNEQNKSTELEIIFELFNVIARKILLQILPGEESSWIELT GHSQAERYLQELKKHPAFTSGKSWAGGGDFIRSYEVLLQTVRTLEHLKKESLINLITGENLVRFKESKEPIHFDLSNFEV DDASIKSVGMSRTELFREVLERIRSREDFLKKERKGSGGETIGLMILAKSMILRAFIEVRQKRTSIHNLIRQNGFPRGIY EFLKEVSDVKDGQVAVDEQIRLSKAIAEWEEDTEKERIRSERASKSILERIIEFILSLFGIKVAPKERDTTNKGQVKKDF KNIESDHSSQEPSKPKKKKSLGVIVGPKEKELMIPSRVQKAIDYVDRKNNGLIWLDEVVVAISSPEFGKDKVADLIYYDQ KRRYMEIRAMNQVRHVFIRKELESDSAWIQTTLDYLDNVSAKKPEFSALADTLRRFQNE
Sequences:
>Translated_699_residues MIWARWVMSKSENQVPTPETFVLSSEDTQDMIGDQELKVLMLQYNPGAFKDIDLIEKGVENYFLFNQSPFALTKIEQLQH LKLNDLKFLEERRGIQSYQFLLFQKEIRELQIANVIIRPASLKADQIVKVKRGCVLQSVAAILEMLYARDQFILNISKNS DVEDWVHQNYINVDDKGIQINLSDSKFLEKSMQNLESLSLESLLDRLKVRGDLFSNIFQILNQKPGEILNQLSLIKVEPE VLPVLEKRGSRSPLLQLHPRFHLFQPSFEELLSFRHTSKEKNEQNKSTELEIIFELFNVIARKILLQILPGEESSWIELT GHSQAERYLQELKKHPAFTSGKSWAGGGDFIRSYEVLLQTVRTLEHLKKESLINLITGENLVRFKESKEPIHFDLSNFEV DDASIKSVGMSRTELFREVLERIRSREDFLKKERKGSGGETIGLMILAKSMILRAFIEVRQKRTSIHNLIRQNGFPRGIY EFLKEVSDVKDGQVAVDEQIRLSKAIAEWEEDTEKERIRSERASKSILERIIEFILSLFGIKVAPKERDTTNKGQVKKDF KNIESDHSSQEPSKPKKKKSLGVIVGPKEKELMIPSRVQKAIDYVDRKNNGLIWLDEVVVAISSPEFGKDKVADLIYYDQ KRRYMEIRAMNQVRHVFIRKELESDSAWIQTTLDYLDNVSAKKPEFSALADTLRRFQNE >Mature_699_residues MIWARWVMSKSENQVPTPETFVLSSEDTQDMIGDQELKVLMLQYNPGAFKDIDLIEKGVENYFLFNQSPFALTKIEQLQH LKLNDLKFLEERRGIQSYQFLLFQKEIRELQIANVIIRPASLKADQIVKVKRGCVLQSVAAILEMLYARDQFILNISKNS DVEDWVHQNYINVDDKGIQINLSDSKFLEKSMQNLESLSLESLLDRLKVRGDLFSNIFQILNQKPGEILNQLSLIKVEPE VLPVLEKRGSRSPLLQLHPRFHLFQPSFEELLSFRHTSKEKNEQNKSTELEIIFELFNVIARKILLQILPGEESSWIELT GHSQAERYLQELKKHPAFTSGKSWAGGGDFIRSYEVLLQTVRTLEHLKKESLINLITGENLVRFKESKEPIHFDLSNFEV DDASIKSVGMSRTELFREVLERIRSREDFLKKERKGSGGETIGLMILAKSMILRAFIEVRQKRTSIHNLIRQNGFPRGIY EFLKEVSDVKDGQVAVDEQIRLSKAIAEWEEDTEKERIRSERASKSILERIIEFILSLFGIKVAPKERDTTNKGQVKKDF KNIESDHSSQEPSKPKKKKSLGVIVGPKEKELMIPSRVQKAIDYVDRKNNGLIWLDEVVVAISSPEFGKDKVADLIYYDQ KRRYMEIRAMNQVRHVFIRKELESDSAWIQTTLDYLDNVSAKKPEFSALADTLRRFQNE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 81031; Mature: 81031
Theoretical pI: Translated: 7.87; Mature: 7.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIWARWVMSKSENQVPTPETFVLSSEDTQDMIGDQELKVLMLQYNPGAFKDIDLIEKGVE CCCHHHHHCCCCCCCCCCCEEEECCCCCHHHCCCCCEEEEEEEECCCCCCHHHHHHHHHH NYFLFNQSPFALTKIEQLQHLKLNDLKFLEERRGIQSYQFLLFQKEIRELQIANVIIRPA HEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHEECCC SLKADQIVKVKRGCVLQSVAAILEMLYARDQFILNISKNSDVEDWVHQNYINVDDKGIQI CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHCCCCCCCCCCEEE NLSDSKFLEKSMQNLESLSLESLLDRLKVRGDLFSNIFQILNQKPGEILNQLSLIKVEPE EECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHEEECHH VLPVLEKRGSRSPLLQLHPRFHLFQPSFEELLSFRHTSKEKNEQNKSTELEIIFELFNVI HHHHHHCCCCCCCEEEECCCCEECCCCHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHH ARKILLQILPGEESSWIELTGHSQAERYLQELKKHPAFTSGKSWAGGGDFIRSYEVLLQT HHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHH VRTLEHLKKESLINLITGENLVRFKESKEPIHFDLSNFEVDDASIKSVGMSRTELFREVL HHHHHHHHHHHHHHHHCCCCCEEECCCCCCEEEECCCCCCCCHHHHHHCCCHHHHHHHHH ERIRSREDFLKKERKGSGGETIGLMILAKSMILRAFIEVRQKRTSIHNLIRQNGFPRGIY HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH EFLKEVSDVKDGQVAVDEQIRLSKAIAEWEEDTEKERIRSERASKSILERIIEFILSLFG HHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC IKVAPKERDTTNKGQVKKDFKNIESDHSSQEPSKPKKKKSLGVIVGPKEKELMIPSRVQK CCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHCCCEEECCCCCCCCCHHHHHH AIDYVDRKNNGLIWLDEVVVAISSPEFGKDKVADLIYYDQKRRYMEIRAMNQVRHVFIRK HHHHHHCCCCCEEEHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ELESDSAWIQTTLDYLDNVSAKKPEFSALADTLRRFQNE HHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCC >Mature Secondary Structure MIWARWVMSKSENQVPTPETFVLSSEDTQDMIGDQELKVLMLQYNPGAFKDIDLIEKGVE CCCHHHHHCCCCCCCCCCCEEEECCCCCHHHCCCCCEEEEEEEECCCCCCHHHHHHHHHH NYFLFNQSPFALTKIEQLQHLKLNDLKFLEERRGIQSYQFLLFQKEIRELQIANVIIRPA HEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHEECCC SLKADQIVKVKRGCVLQSVAAILEMLYARDQFILNISKNSDVEDWVHQNYINVDDKGIQI CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHCCCCCCCCCCEEE NLSDSKFLEKSMQNLESLSLESLLDRLKVRGDLFSNIFQILNQKPGEILNQLSLIKVEPE EECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHEEECHH VLPVLEKRGSRSPLLQLHPRFHLFQPSFEELLSFRHTSKEKNEQNKSTELEIIFELFNVI HHHHHHCCCCCCCEEEECCCCEECCCCHHHHHHHHHCCHHHHHCCCCHHHHHHHHHHHHH ARKILLQILPGEESSWIELTGHSQAERYLQELKKHPAFTSGKSWAGGGDFIRSYEVLLQT HHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHH VRTLEHLKKESLINLITGENLVRFKESKEPIHFDLSNFEVDDASIKSVGMSRTELFREVL HHHHHHHHHHHHHHHHCCCCCEEECCCCCCEEEECCCCCCCCHHHHHHCCCHHHHHHHHH ERIRSREDFLKKERKGSGGETIGLMILAKSMILRAFIEVRQKRTSIHNLIRQNGFPRGIY HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHH EFLKEVSDVKDGQVAVDEQIRLSKAIAEWEEDTEKERIRSERASKSILERIIEFILSLFG HHHHHHHCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC IKVAPKERDTTNKGQVKKDFKNIESDHSSQEPSKPKKKKSLGVIVGPKEKELMIPSRVQK CCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCHHHHCCCEEECCCCCCCCCHHHHHH AIDYVDRKNNGLIWLDEVVVAISSPEFGKDKVADLIYYDQKRRYMEIRAMNQVRHVFIRK HHHHHHCCCCCEEEHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ELESDSAWIQTTLDYLDNVSAKKPEFSALADTLRRFQNE HHCCCHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA