Click here to switch to the map view.

The map label for this gene is ybaZ [H]

Identifier: 45656029

GI number: 45656029

Start: 138884

End: 139297

Strand: Reverse

Name: ybaZ [H]

Synonym: LIC10119

Alternate gene names: 45656029

Gene position: 139297-138884 (Counterclockwise)

Preceding gene: 45656030

Following gene: 45656028

Centisome position: 3.26

GC content: 35.02

Gene sequence:

>414_bases
GTGAAACATAAAAAAGCAAATTCAGAAATTTCATTTTTTAAGGAAGTTTATGTTTTGGTAAAAAAAATTCCCAAAGGAAA
AGTAACTTCTTACGGAAGAATAGCGGCACTTTTAGGAAAACCTAGAGCAGCTCGTGCCGTCGGGTACGCGTTAAACGCTC
TTTCTAAGGATCAAGAACAAAAAGTCCCTTGGCAAAGAGTTATCAATAGTCAGGGAAAAATTTCCTTCCGAGGAGATACG
GGGCGTTCAATTTTACAGAGGAAAATTCTTGAAGATGAAGGAGTCAAATTTGATTTTGCAGACAAGATAGATTGGAAAGT
GTTTGGTTGGCCAGATATGATTCCATCTAAATCACTTCTTAAAAAAAGAAAACTAACATCTATAAGTGTTGTTAAACAAA
AAAAGCGAAAATAG

Upstream 100 bases:

>100_bases
TTATTCTAATTTTTTAAAAAATATTCTAAAAAATGAATATACTCATTTTAAAATTTTAGAAAAACACTTTGACTGAAAAA
TCAATTTTAAGGTAAATAAC

Downstream 100 bases:

>100_bases
ATCAAAGCCAAAATAAGCTTTAAAATTGTAAAAGTATGAATTTAAATTACTTATTTGATTTTTTTGATAAAAACTTATTC
TTAAATTTAAGAACTGTTGT

Product: methylated-DNA--protein-cysteine methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 137; Mature: 137

Protein sequence:

>137_residues
MKHKKANSEISFFKEVYVLVKKIPKGKVTSYGRIAALLGKPRAARAVGYALNALSKDQEQKVPWQRVINSQGKISFRGDT
GRSILQRKILEDEGVKFDFADKIDWKVFGWPDMIPSKSLLKKRKLTSISVVKQKKRK

Sequences:

>Translated_137_residues
MKHKKANSEISFFKEVYVLVKKIPKGKVTSYGRIAALLGKPRAARAVGYALNALSKDQEQKVPWQRVINSQGKISFRGDT
GRSILQRKILEDEGVKFDFADKIDWKVFGWPDMIPSKSLLKKRKLTSISVVKQKKRK
>Mature_137_residues
MKHKKANSEISFFKEVYVLVKKIPKGKVTSYGRIAALLGKPRAARAVGYALNALSKDQEQKVPWQRVINSQGKISFRGDT
GRSILQRKILEDEGVKFDFADKIDWKVFGWPDMIPSKSLLKKRKLTSISVVKQKKRK

Specific function: Unknown

COG id: COG3695

COG function: function code L; Predicted methylated DNA-protein cysteine methyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the MGMT family [H]

Homologues:

Organism=Escherichia coli, GI1786659, Length=110, Percent_Identity=40.9090909090909, Blast_Score=74, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014048
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01035 DNA_binding_1 [H]

EC number: NA

Molecular weight: Translated: 15647; Mature: 15647

Theoretical pI: Translated: 11.17; Mature: 11.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKHKKANSEISFFKEVYVLVKKIPKGKVTSYGRIAALLGKPRAARAVGYALNALSKDQEQ
CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHCCCHHH
KVPWQRVINSQGKISFRGDTGRSILQRKILEDEGVKFDFADKIDWKVFGWPDMIPSKSLL
CCCHHHHHCCCCCEEECCCCHHHHHHHHHHHCCCCEEECCCCCCEEEECCCCCCCCHHHH
KKRKLTSISVVKQKKRK
HHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKHKKANSEISFFKEVYVLVKKIPKGKVTSYGRIAALLGKPRAARAVGYALNALSKDQEQ
CCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHCCCHHH
KVPWQRVINSQGKISFRGDTGRSILQRKILEDEGVKFDFADKIDWKVFGWPDMIPSKSLL
CCCHHHHHCCCCCEEECCCCHHHHHHHHHHHCCCCEEECCCCCCEEEECCCCCCCCHHHH
KKRKLTSISVVKQKKRK
HHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]