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The map label for this gene is 45358816

Identifier: 45358816

GI number: 45358816

Start: 1236001

End: 1236900

Strand: Direct

Name: 45358816

Synonym: MMP1253

Alternate gene names: NA

Gene position: 1236001-1236900 (Clockwise)

Preceding gene: 45358815

Following gene: 45358817

Centisome position: 74.41

GC content: 33.22

Gene sequence:

>900_bases
TTGAGAATTAAACCAGAATGCGCACTCTGCATTACACGACAGGTTGTAGATGTTGCAAAGGAAATAACTGATGATAAATC
CGAACAGTTTAAAATTATAGCTTGGGGAATCGAAAAAATATCCGAAGCGTATGGGGAATCTTCCGTTCCATCATTTATGG
GTACTGAAATTCACAGGCATATTAAAAAAATGAGTAAAAATTCTGACCCTTACAAAAATTTAAAAAACGTTGCAAACGAA
TTTGCTCTCAAATATCTAAATGATGTTGAAAAGTTACTTGAAAGCGACGATGAACTCGAAAGATTGCAGAACAAAGTAAA
ATTATCGATTGCAGGGAATGTAATTGATTTTGGCCCATACAGTACGGGTGTTAATATCGAAAAAATGGTAAAGGATACAC
TTGATGGGAAACTAGACGTTGATTTTAGTAAAGAATTATTAGATGAACTTAAAAATTCAAAAAAAGTGTTTTATACCTGT
GACAATGCTGGAGAAATTGTTTTTGATCTTCCACTGATAAAAGAACTTAAAAATTATGTTGAAGTTGTAGTGTCCGTTAA
AGGAAGTCCAATATTAAACGATGCTACCTTAGACGACGTTAAAACCGCAGGAATCGATAAAGTAACAAAAGTAATTACAA
GCGGAACTGATGCAATTGGAGTAAGGTTTGAAGAATCTTCAGAAGAATTTATAAATGAATTAAACAGTTCTGATTTTGTT
ATTGCAAAAGGAATGGGCAATTACGAGAGTTTAACCGAATACGAAGAAAAACACGGACAAAACTCTGAAAAAATTCCTGT
TTATTACATTTTAAAGGCAAAATGTGAGCCTGTTGCCGAACACATTGGAGTTAGTGAAGGCGATAACGTTCTTTTAAGGA
AAGAGATAAGTAAAGTTTAA

Upstream 100 bases:

>100_bases
TAACTTTTTTCATATTTTTATTTTTCAATGGCATTTATTTTTTATAGTGAAATTTACTATTATTTTTCAAATTTGATTAT
TACATTACCGGTGATGACTT

Downstream 100 bases:

>100_bases
AATTAATAAAAGCAAATTACAATAGAGAAAAACATTTATTCATTTATTTAAGGTGGTATTTTGGTAACTTACAAAGACGC
TGGTGTGGACATATATAAAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 299; Mature: 299

Protein sequence:

>299_residues
MRIKPECALCITRQVVDVAKEITDDKSEQFKIIAWGIEKISEAYGESSVPSFMGTEIHRHIKKMSKNSDPYKNLKNVANE
FALKYLNDVEKLLESDDELERLQNKVKLSIAGNVIDFGPYSTGVNIEKMVKDTLDGKLDVDFSKELLDELKNSKKVFYTC
DNAGEIVFDLPLIKELKNYVEVVVSVKGSPILNDATLDDVKTAGIDKVTKVITSGTDAIGVRFEESSEEFINELNSSDFV
IAKGMGNYESLTEYEEKHGQNSEKIPVYYILKAKCEPVAEHIGVSEGDNVLLRKEISKV

Sequences:

>Translated_299_residues
MRIKPECALCITRQVVDVAKEITDDKSEQFKIIAWGIEKISEAYGESSVPSFMGTEIHRHIKKMSKNSDPYKNLKNVANE
FALKYLNDVEKLLESDDELERLQNKVKLSIAGNVIDFGPYSTGVNIEKMVKDTLDGKLDVDFSKELLDELKNSKKVFYTC
DNAGEIVFDLPLIKELKNYVEVVVSVKGSPILNDATLDDVKTAGIDKVTKVITSGTDAIGVRFEESSEEFINELNSSDFV
IAKGMGNYESLTEYEEKHGQNSEKIPVYYILKAKCEPVAEHIGVSEGDNVLLRKEISKV
>Mature_299_residues
MRIKPECALCITRQVVDVAKEITDDKSEQFKIIAWGIEKISEAYGESSVPSFMGTEIHRHIKKMSKNSDPYKNLKNVANE
FALKYLNDVEKLLESDDELERLQNKVKLSIAGNVIDFGPYSTGVNIEKMVKDTLDGKLDVDFSKELLDELKNSKKVFYTC
DNAGEIVFDLPLIKELKNYVEVVVSVKGSPILNDATLDDVKTAGIDKVTKVITSGTDAIGVRFEESSEEFINELNSSDFV
IAKGMGNYESLTEYEEKHGQNSEKIPVYYILKAKCEPVAEHIGVSEGDNVLLRKEISKV

Specific function: Unknown

COG id: COG1578

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002791
- InterPro:   IPR014444 [H]

Pfam domain/function: PF01937 DUF89 [H]

EC number: NA

Molecular weight: Translated: 33501; Mature: 33501

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRIKPECALCITRQVVDVAKEITDDKSEQFKIIAWGIEKISEAYGESSVPSFMGTEIHRH
CCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHCCCCCCHHHHHHHHHH
IKKMSKNSDPYKNLKNVANEFALKYLNDVEKLLESDDELERLQNKVKLSIAGNVIDFGPY
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHEEEEEECCEEECCCC
STGVNIEKMVKDTLDGKLDVDFSKELLDELKNSKKVFYTCDNAGEIVFDLPLIKELKNYV
CCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCEEEECHHHHHHHHHH
EVVVSVKGSPILNDATLDDVKTAGIDKVTKVITSGTDAIGVRFEESSEEFINELNSSDFV
HHHHHCCCCCCCCCCCHHHHHHCCHHHHHHHHHCCCCCEEEEECCCHHHHHHHCCCCCEE
IAKGMGNYESLTEYEEKHGQNSEKIPVYYILKAKCEPVAEHIGVSEGDNVLLRKEISKV
EECCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHHCCCCCCCCEEHHHHHHCC
>Mature Secondary Structure
MRIKPECALCITRQVVDVAKEITDDKSEQFKIIAWGIEKISEAYGESSVPSFMGTEIHRH
CCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHCCCCCCHHHHHHHHHH
IKKMSKNSDPYKNLKNVANEFALKYLNDVEKLLESDDELERLQNKVKLSIAGNVIDFGPY
HHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHEEEEEECCEEECCCC
STGVNIEKMVKDTLDGKLDVDFSKELLDELKNSKKVFYTCDNAGEIVFDLPLIKELKNYV
CCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHCCCEEEEEECCCCCEEEECHHHHHHHHHH
EVVVSVKGSPILNDATLDDVKTAGIDKVTKVITSGTDAIGVRFEESSEEFINELNSSDFV
HHHHHCCCCCCCCCCCHHHHHHCCHHHHHHHHHCCCCCEEEEECCCHHHHHHHCCCCCEE
IAKGMGNYESLTEYEEKHGQNSEKIPVYYILKAKCEPVAEHIGVSEGDNVLLRKEISKV
EECCCCCHHHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHHCCCCCCCCEEHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]