Click here to switch to the map view.

The map label for this gene is 45358815

Identifier: 45358815

GI number: 45358815

Start: 1235042

End: 1235881

Strand: Direct

Name: 45358815

Synonym: MMP1252

Alternate gene names: NA

Gene position: 1235042-1235881 (Clockwise)

Preceding gene: 45358814

Following gene: 45358816

Centisome position: 74.35

GC content: 34.52

Gene sequence:

>840_bases
TTGAAAATAAAAACCATTGTCGGCGAAAAAAAAGTCGAAAAAGTATACCCTACAACAAAAATTATTGAAGCACTCACAAT
GATGGATAAGGAAAACGTCAGAAGGATATGTGTTGCGGATCCTGGAACTGGACGGGTAGAAGGAATTTTGACGAACATGG
ATATTGTGGACTTTCTCGGAGGAGGCTCCAAATATAACCTCGTAAAGTTCAAACACAATCACAACATGCTTTCTGCTATC
AACGAGCCTGTGAAAGAAATAATGACCGACAATGTGGTATTAATAAAGGAAAATGTAGAATTAGACGAAGTAATTGATTT
ATTTGTTAAAAAAAAAATTGGTGGAATGCCCGTAATTGATAAATCAGGCGTTTTAATTACCACCATTAATGAAAGGGACG
TTATAAAATATTTAAAAGATCAGGTTGACGAAAAGCTTCTTGTAAAAGACTGCATGACTGAAAACGTAGTTTTCGCAACA
CCGGGGGAAAGATTAAAGGATGTTGCACGAACAATGCTTAGAAATGGATTTAGAAGGCTTCCTGTGGTTTCTGAAGAAAA
ATTAGTTGGTATAATCACTTCAACGGACTTTGTAAAATTATTTGGAAGCGACTGGGCATTTAACCACATGAAAACCGGAA
ATATTCGAGAAATTACGAACGTAAGAATACAGGACATTATGAAAACAAATATCGTTTCAGTAACCTCAAACATTAAGTTA
GTTGATGCAATTAAAAAGATGAACGAACTAAATATTGGGGTACTTCCAGTAGTTGATGGGGAAAAACTCATTGGATTAAT
TACTGAAAAAGATATTGTAAAGTGCATTTACAAAAAATAG

Upstream 100 bases:

>100_bases
ACAGACAGTGTAAATTACATTAATGGAAGATACATCTGTAAAAACTGCAATGAAGACTCTGAAGGCGAAGAAGAGTAATT
ATCTAAAAAAGAGGGATATT

Downstream 100 bases:

>100_bases
ATAATAACTAAAAAATTACTAACTTTTTTCATATTTTTATTTTTCAATGGCATTTATTTTTTATAGTGAAATTTACTATT
ATTTTTCAAATTTGATTATT

Product: CBS domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 279; Mature: 279

Protein sequence:

>279_residues
MKIKTIVGEKKVEKVYPTTKIIEALTMMDKENVRRICVADPGTGRVEGILTNMDIVDFLGGGSKYNLVKFKHNHNMLSAI
NEPVKEIMTDNVVLIKENVELDEVIDLFVKKKIGGMPVIDKSGVLITTINERDVIKYLKDQVDEKLLVKDCMTENVVFAT
PGERLKDVARTMLRNGFRRLPVVSEEKLVGIITSTDFVKLFGSDWAFNHMKTGNIREITNVRIQDIMKTNIVSVTSNIKL
VDAIKKMNELNIGVLPVVDGEKLIGLITEKDIVKCIYKK

Sequences:

>Translated_279_residues
MKIKTIVGEKKVEKVYPTTKIIEALTMMDKENVRRICVADPGTGRVEGILTNMDIVDFLGGGSKYNLVKFKHNHNMLSAI
NEPVKEIMTDNVVLIKENVELDEVIDLFVKKKIGGMPVIDKSGVLITTINERDVIKYLKDQVDEKLLVKDCMTENVVFAT
PGERLKDVARTMLRNGFRRLPVVSEEKLVGIITSTDFVKLFGSDWAFNHMKTGNIREITNVRIQDIMKTNIVSVTSNIKL
VDAIKKMNELNIGVLPVVDGEKLIGLITEKDIVKCIYKK
>Mature_279_residues
MKIKTIVGEKKVEKVYPTTKIIEALTMMDKENVRRICVADPGTGRVEGILTNMDIVDFLGGGSKYNLVKFKHNHNMLSAI
NEPVKEIMTDNVVLIKENVELDEVIDLFVKKKIGGMPVIDKSGVLITTINERDVIKYLKDQVDEKLLVKDCMTENVVFAT
PGERLKDVARTMLRNGFRRLPVVSEEKLVGIITSTDFVKLFGSDWAFNHMKTGNIREITNVRIQDIMKTNIVSVTSNIKL
VDAIKKMNELNIGVLPVVDGEKLIGLITEKDIVKCIYKK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 4 CBS domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000644 [H]

Pfam domain/function: PF00571 CBS [H]

EC number: NA

Molecular weight: Translated: 31434; Mature: 31434

Theoretical pI: Translated: 9.30; Mature: 9.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
4.3 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
4.3 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIKTIVGEKKVEKVYPTTKIIEALTMMDKENVRRICVADPGTGRVEGILTNMDIVDFLG
CEECCHHCHHHHHHHCCHHHHHHHHHHHCHHCCCEEEEECCCCCCEEEEEECCHHHHHCC
GGSKYNLVKFKHNHNMLSAINEPVKEIMTDNVVLIKENVELDEVIDLFVKKKIGGMPVID
CCCEEEEEEEECCCCHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHCCCCCEEE
KSGVLITTINERDVIKYLKDQVDEKLLVKDCMTENVVFATPGERLKDVARTMLRNGFRRL
CCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHCCHHCC
PVVSEEKLVGIITSTDFVKLFGSDWAFNHMKTGNIREITNVRIQDIMKTNIVSVTSNIKL
CCCCCCCEEEEEECCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHEECCCCCHH
VDAIKKMNELNIGVLPVVDGEKLIGLITEKDIVKCIYKK
HHHHHHHHHCCCEEEEEECCCCEEEEECHHHHHHHHHCC
>Mature Secondary Structure
MKIKTIVGEKKVEKVYPTTKIIEALTMMDKENVRRICVADPGTGRVEGILTNMDIVDFLG
CEECCHHCHHHHHHHCCHHHHHHHHHHHCHHCCCEEEEECCCCCCEEEEEECCHHHHHCC
GGSKYNLVKFKHNHNMLSAINEPVKEIMTDNVVLIKENVELDEVIDLFVKKKIGGMPVID
CCCEEEEEEEECCCCHHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHHCCCCCEEE
KSGVLITTINERDVIKYLKDQVDEKLLVKDCMTENVVFATPGERLKDVARTMLRNGFRRL
CCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCHHHHHHHHHHHHCCHHCC
PVVSEEKLVGIITSTDFVKLFGSDWAFNHMKTGNIREITNVRIQDIMKTNIVSVTSNIKL
CCCCCCCEEEEEECCHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHEECCCCCHH
VDAIKKMNELNIGVLPVVDGEKLIGLITEKDIVKCIYKK
HHHHHHHHHCCCEEEEEECCCCEEEEECHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]