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The map label for this gene is 45358814

Identifier: 45358814

GI number: 45358814

Start: 1234459

End: 1235019

Strand: Direct

Name: 45358814

Synonym: MMP1251

Alternate gene names: NA

Gene position: 1234459-1235019 (Clockwise)

Preceding gene: 45358813

Following gene: 45358815

Centisome position: 74.31

GC content: 37.43

Gene sequence:

>561_bases
ATGAACCTGGAGCTTTCAGTAACTGAAGCCATGAGTACGCCGGTAGCCACTGTAACATTGGATACCACAGCTTACGACGT
GGCAAATATCCTTAAAGAAAAAGGAATCGGATGTTTAGTAGTGTTAAACGATGCTGGAAAACCGGTAGGTATCATAACAG
AAAGGGATTTAGCACTCGGAGTTGTTTCAAGGAATTTAAAATCAAAAGAAGTAATTGTTGAAGAAATTTCCTCTTCAAAA
TTAATAGCAATTGCTCCAAAATCTACGCTGATGGATGCAGCTAGAAAAATGGACACAGAAAATGTAAAAAGACTCCCAGT
AATCGATGGTGATGAGTTACTTGGAATAGTTACAGTAAGCGACATTACAAAGCTATCACCTGAGTTATTCAGCATAATGG
TCGAAACAAACGAGATTCATAATTCAGAATACCCGTACTCGAAAAATGAGGAAATTGAAGGGATTTGTGAAATTTGCGGA
AGTACAGACAGTGTAAATTACATTAATGGAAGATACATCTGTAAAAACTGCAATGAAGACTCTGAAGGCGAAGAAGAGTA
A

Upstream 100 bases:

>100_bases
CTTGAAATAATAGTGTAAAAGGCGTAAAATCAAATAAAAATTTATATAAATTATAATTTGCACACTTTTAGCATGATTAT
TTTCTAAACCTGGTGATAAC

Downstream 100 bases:

>100_bases
TTATCTAAAAAAGAGGGATATTTTGAAAATAAAAACCATTGTCGGCGAAAAAAAAGTCGAAAAAGTATACCCTACAACAA
AAATTATTGAAGCACTCACA

Product: putative CBS domain-containing signal transduction protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 186; Mature: 186

Protein sequence:

>186_residues
MNLELSVTEAMSTPVATVTLDTTAYDVANILKEKGIGCLVVLNDAGKPVGIITERDLALGVVSRNLKSKEVIVEEISSSK
LIAIAPKSTLMDAARKMDTENVKRLPVIDGDELLGIVTVSDITKLSPELFSIMVETNEIHNSEYPYSKNEEIEGICEICG
STDSVNYINGRYICKNCNEDSEGEEE

Sequences:

>Translated_186_residues
MNLELSVTEAMSTPVATVTLDTTAYDVANILKEKGIGCLVVLNDAGKPVGIITERDLALGVVSRNLKSKEVIVEEISSSK
LIAIAPKSTLMDAARKMDTENVKRLPVIDGDELLGIVTVSDITKLSPELFSIMVETNEIHNSEYPYSKNEEIEGICEICG
STDSVNYINGRYICKNCNEDSEGEEE
>Mature_186_residues
MNLELSVTEAMSTPVATVTLDTTAYDVANILKEKGIGCLVVLNDAGKPVGIITERDLALGVVSRNLKSKEVIVEEISSSK
LIAIAPKSTLMDAARKMDTENVKRLPVIDGDELLGIVTVSDITKLSPELFSIMVETNEIHNSEYPYSKNEEIEGICEICG
STDSVNYINGRYICKNCNEDSEGEEE

Specific function: Unknown

COG id: COG0517

COG function: function code R; FOG: CBS domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000644 [H]

Pfam domain/function: PF00571 CBS [H]

EC number: NA

Molecular weight: Translated: 20246; Mature: 20246

Theoretical pI: Translated: 4.13; Mature: 4.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLELSVTEAMSTPVATVTLDTTAYDVANILKEKGIGCLVVLNDAGKPVGIITERDLALG
CCCEEEHHHHCCCCEEEEEECCHHHHHHHHHHHCCCEEEEEECCCCCCEEEEECCCHHHH
VVSRNLKSKEVIVEEISSSKLIAIAPKSTLMDAARKMDTENVKRLPVIDGDELLGIVTVS
HHHCCCCHHHHHHHHCCCCCEEEECCHHHHHHHHHHCCCCCCEECCCCCCCCEEEEEEEC
DITKLSPELFSIMVETNEIHNSEYPYSKNEEIEGICEICGSTDSVNYINGRYICKNCNED
HHHHCCHHHEEEEEECCCCCCCCCCCCCCCCHHHHHHHCCCCCCCEEECCEEEECCCCCC
SEGEEE
CCCCCC
>Mature Secondary Structure
MNLELSVTEAMSTPVATVTLDTTAYDVANILKEKGIGCLVVLNDAGKPVGIITERDLALG
CCCEEEHHHHCCCCEEEEEECCHHHHHHHHHHHCCCEEEEEECCCCCCEEEEECCCHHHH
VVSRNLKSKEVIVEEISSSKLIAIAPKSTLMDAARKMDTENVKRLPVIDGDELLGIVTVS
HHHCCCCHHHHHHHHCCCCCEEEECCHHHHHHHHHHCCCCCCEECCCCCCCCEEEEEEEC
DITKLSPELFSIMVETNEIHNSEYPYSKNEEIEGICEICGSTDSVNYINGRYICKNCNED
HHHHCCHHHEEEEEECCCCCCCCCCCCCCCCHHHHHHHCCCCCCCEEECCEEEECCCCCC
SEGEEE
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]