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The map label for this gene is 45358744

Identifier: 45358744

GI number: 45358744

Start: 1164318

End: 1165454

Strand: Direct

Name: 45358744

Synonym: MMP1181

Alternate gene names: NA

Gene position: 1164318-1165454 (Clockwise)

Preceding gene: 45358743

Following gene: 45358745

Centisome position: 70.09

GC content: 35.18

Gene sequence:

>1137_bases
ATGTATAAAAATGGGATTTTGGCCATTATTTTGTCGCTGATGATTGCACTCAGTTTTTCAGGCTGTGTCGATAATACGGC
CCAAACTTCAGGCGAAACGGTAAAAACCGTTGAAATTGTAGACCTGGCTGGAAGAACTGTTGAAGTTCCAGAAGATGTTG
AAAAAATTGTTTGTTCGGGCCCAGGCGCACTAAGACTTGTTACTTATCTTCAGGCAGATGACATGTTAGTGGGGGTTGAA
TCTTGCGAACAGGCAGACATTACAGGTGCAGGTAAACAATATGCCCTGGCTAAACCTTACACCATTGCAAATGTTGATTA
TTTTAAAACCTTACCTACAATTGGCACTCAATTTGTCGATGGATTAAACTGTGAAAATATAGTTAACGTGAATCCCGATG
TTATAATAATTTCAATGTCAACAGCAGAAGTTGCAGACAATATTCAGACAAAAACCGGAATTCCTGTCGTAGTTTTAGAT
TATGATGAATTTGAATCTTTTACTGACAAAGATCTTGCAGATCCACTTACACTACTTGGTAAAGTGTTAAACAGAGAAGA
AAGAGCGCAAGCAGTAATTAATTTCTTTGCAGATGCTGAAAATGATATATCAAATAGAATTTCAGATGTTTCAGATAGCG
AAAAACCATCAGTATACGTCGGCGGACTTAACGCTGCAAAAGGATCCCACGGTATAGAAAGTACATCAAGTGTATTTGCA
CCATTTGAAGTTTTAAAAGCTAAAAATGTTGCTGAATCCATTGAAACAAAAAAACAGGTATATATTAACAAAGAACAGCT
TATAGAGTGGAATCCAGATATAATTTTTATTGATATTGCAGGATATACTTCCGTAATAAATGAAGACTATGAAAAAAACC
CAGAATACTATGAATCACTCAGTGCATTCAAAAACGGTGATGTTTACTTAATATATAGGTACAAATCATACATGGTGGAC
TACGGAACTGTACTCGCAAATACTTATTATATTGGTACCGTATTATACCCCGAAGAATTTTCAGATATTGATCCAGAAGC
TAAAGCTGATGAAATATATGAATTTTTAGTTGGTGAAGCTGTTTATGATAAAATGGCAGAAAATTTTGAAGGATATACCA
AATTAGACCTTAACTAA

Upstream 100 bases:

>100_bases
TTTTTATAGTTTAATTAATGTATTTATATTACTTAGGGATGTATCTTTAAAAAGATAATAAAAAAATTATATATTCATAT
CAATAGATACGGGTGAAAAA

Downstream 100 bases:

>100_bases
TATCATATATTATTTTTTTAAAAAATTTATTTTTTCATAATATTAAATACTTATTTATAGGTTAAAATAATACTTATTTT
ATAAGTGTATTACCAAAACA

Product: iron transport system binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 378; Mature: 378

Protein sequence:

>378_residues
MYKNGILAIILSLMIALSFSGCVDNTAQTSGETVKTVEIVDLAGRTVEVPEDVEKIVCSGPGALRLVTYLQADDMLVGVE
SCEQADITGAGKQYALAKPYTIANVDYFKTLPTIGTQFVDGLNCENIVNVNPDVIIISMSTAEVADNIQTKTGIPVVVLD
YDEFESFTDKDLADPLTLLGKVLNREERAQAVINFFADAENDISNRISDVSDSEKPSVYVGGLNAAKGSHGIESTSSVFA
PFEVLKAKNVAESIETKKQVYINKEQLIEWNPDIIFIDIAGYTSVINEDYEKNPEYYESLSAFKNGDVYLIYRYKSYMVD
YGTVLANTYYIGTVLYPEEFSDIDPEAKADEIYEFLVGEAVYDKMAENFEGYTKLDLN

Sequences:

>Translated_378_residues
MYKNGILAIILSLMIALSFSGCVDNTAQTSGETVKTVEIVDLAGRTVEVPEDVEKIVCSGPGALRLVTYLQADDMLVGVE
SCEQADITGAGKQYALAKPYTIANVDYFKTLPTIGTQFVDGLNCENIVNVNPDVIIISMSTAEVADNIQTKTGIPVVVLD
YDEFESFTDKDLADPLTLLGKVLNREERAQAVINFFADAENDISNRISDVSDSEKPSVYVGGLNAAKGSHGIESTSSVFA
PFEVLKAKNVAESIETKKQVYINKEQLIEWNPDIIFIDIAGYTSVINEDYEKNPEYYESLSAFKNGDVYLIYRYKSYMVD
YGTVLANTYYIGTVLYPEEFSDIDPEAKADEIYEFLVGEAVYDKMAENFEGYTKLDLN
>Mature_378_residues
MYKNGILAIILSLMIALSFSGCVDNTAQTSGETVKTVEIVDLAGRTVEVPEDVEKIVCSGPGALRLVTYLQADDMLVGVE
SCEQADITGAGKQYALAKPYTIANVDYFKTLPTIGTQFVDGLNCENIVNVNPDVIIISMSTAEVADNIQTKTGIPVVVLD
YDEFESFTDKDLADPLTLLGKVLNREERAQAVINFFADAENDISNRISDVSDSEKPSVYVGGLNAAKGSHGIESTSSVFA
PFEVLKAKNVAESIETKKQVYINKEQLIEWNPDIIFIDIAGYTSVINEDYEKNPEYYESLSAFKNGDVYLIYRYKSYMVD
YGTVLANTYYIGTVLYPEEFSDIDPEAKADEIYEFLVGEAVYDKMAENFEGYTKLDLN

Specific function: Unknown

COG id: COG0614

COG function: function code P; ABC-type Fe3+-hydroxamate transport system, periplasmic component

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Fe/B12 periplasmic-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002491 [H]

Pfam domain/function: PF01497 Peripla_BP_2 [H]

EC number: NA

Molecular weight: Translated: 41741; Mature: 41741

Theoretical pI: Translated: 3.96; Mature: 3.96

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50983 FE_B12_PBP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYKNGILAIILSLMIALSFSGCVDNTAQTSGETVKTVEIVDLAGRTVEVPEDVEKIVCSG
CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEECCCCEEECCHHHHHHHHCC
PGALRLVTYLQADDMLVGVESCEQADITGAGKQYALAKPYTIANVDYFKTLPTIGTQFVD
CCCEEEEEEECCCCEEEECCCCCCCCCCCCCCCEEEECCEEEECCHHHHHHHHHHHHHHC
GLNCENIVNVNPDVIIISMSTAEVADNIQTKTGIPVVVLDYDEFESFTDKDLADPLTLLG
CCCCCCEEECCCCEEEEEECHHHHHHCCHHCCCCEEEEEECHHHHCCCCHHHCCHHHHHH
KVLNREERAQAVINFFADAENDISNRISDVSDSEKPSVYVGGLNAAKGSHGIESTSSVFA
HHHCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHH
PFEVLKAKNVAESIETKKQVYINKEQLIEWNPDIIFIDIAGYTSVINEDYEKNPEYYESL
HHHHHHHHHHHHHHHHHHHEEECHHHHEEECCCEEEEEECCHHHHHHCHHHCCHHHHHHH
SAFKNGDVYLIYRYKSYMVDYGTVLANTYYIGTVLYPEEFSDIDPEAKADEIYEFLVGEA
HHHCCCCEEEEEEEHHHHHHHHHHHHCEEEEEEEECCHHCCCCCCCCCHHHHHHHHHHHH
VYDKMAENFEGYTKLDLN
HHHHHHHCCCCCEEECCC
>Mature Secondary Structure
MYKNGILAIILSLMIALSFSGCVDNTAQTSGETVKTVEIVDLAGRTVEVPEDVEKIVCSG
CCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEEEEECCCCEEECCHHHHHHHHCC
PGALRLVTYLQADDMLVGVESCEQADITGAGKQYALAKPYTIANVDYFKTLPTIGTQFVD
CCCEEEEEEECCCCEEEECCCCCCCCCCCCCCCEEEECCEEEECCHHHHHHHHHHHHHHC
GLNCENIVNVNPDVIIISMSTAEVADNIQTKTGIPVVVLDYDEFESFTDKDLADPLTLLG
CCCCCCEEECCCCEEEEEECHHHHHHCCHHCCCCEEEEEECHHHHCCCCHHHCCHHHHHH
KVLNREERAQAVINFFADAENDISNRISDVSDSEKPSVYVGGLNAAKGSHGIESTSSVFA
HHHCHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCEEEEECCCCCCCCCCCCCCHHHHH
PFEVLKAKNVAESIETKKQVYINKEQLIEWNPDIIFIDIAGYTSVINEDYEKNPEYYESL
HHHHHHHHHHHHHHHHHHHEEECHHHHEEECCCEEEEEECCHHHHHHCHHHCCHHHHHHH
SAFKNGDVYLIYRYKSYMVDYGTVLANTYYIGTVLYPEEFSDIDPEAKADEIYEFLVGEA
HHHCCCCEEEEEEEHHHHHHHHHHHHCEEEEEEEECCHHCCCCCCCCCHHHHHHHHHHHH
VYDKMAENFEGYTKLDLN
HHHHHHHCCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]