Click here to switch to the map view.

The map label for this gene is 45358743

Identifier: 45358743

GI number: 45358743

Start: 1162369

End: 1164126

Strand: Direct

Name: 45358743

Synonym: MMP1180

Alternate gene names: NA

Gene position: 1162369-1164126 (Clockwise)

Preceding gene: 45358742

Following gene: 45358744

Centisome position: 69.97

GC content: 39.53

Gene sequence:

>1758_bases
ATGAAATGTACAGTATGTGAAATCGGTTGTGATATTTCAGAAGGAAATTACGGTCGGTGCAATATGTATACAAATCAAAA
CAGTAAACTCATTGAGAGGTTTCCTAATTCGTATCTTACAGTACTCCCGATCACAATTGAAACAATGCCCATGGTCCATT
TTGCACCAAAAAATAAGTTCCTACAGGTAAGTACGGTTGGATGTAACTTTAACTGTCAGGGCTGTATTTCAGAGACATTA
ACATCAAATGCTGATGCATTATCTGGCGCTCTCACTAAAGCTTCACCCACAGATATCATATCTCGTGCAAAAACTGAAGA
ATGTCGCGGTATTGTTTTTTGTCTTAATGATCCTGCTGCATCATATTATACATTTCTAAATCTAGCAAAAGAAGCAAAAA
AAGCTAATCTTTGGGTTGGATGCTCAACAAACGGTTATTTCACTGAAACAGCCTTAAAATCTCTTATACCTTATCTTGAT
TTTGTTAATATTGGCCTGAAAGGTTCATCGAATGCACGTTATAAAGAATGCGGTGCAAAGTCTGCAGCCCCAGTGTTTAG
AAATATCCGTATCCTGCACGAAGCAGGCGTACACGTGGAAACCTCTGCAATGTACATAAATGCTGGTGATGAAGAGATAT
TAAAAGCCGCAGAGGAAGTAGCATCCGTTTCGAAAGATATACCCTTACAGGTAATGCGTTTTGTACCGTTTGGGGAAGCA
AAACCAGAATTAGAACCGACAATAAATAAATCGGAACATATTGTAGATCAGCTACGCTCCATTCTCAACCACGTCTACCT
GTTTAATTCACCGGGAACTGAATATTTAACAACTAAATGCCCAATTTGCGGGAATGAAATCATCAAACGGGAATTTTACG
GACCCATGGGATGCAGAACTATAGAATCTCTTGACGAAGGTAAGTGTCCCTGCGGATGGCAGGTGCCACTAAAAGGACCA
ATCAATAATGAACAGTTTACTGAATACGGCATGCTTGGGGGATACAGGACCACTCGTGCCATTGAAATGGCCCATGCCAT
TTTATTCACACTTGGAATCCGAGATAATGAAGAGCTTGGAGATATTCTTGGAGATATCATTAAAGAAGACTTCATTCGAG
GGTTGCATGACCGCATTCAACAGATTGATTCATGGCTTGAACTTATCAAAGATCTCGCCATGCGAACTGGGCGGGAAAAA
GAAGGCAATGAACTTATCGCATTTATTCAAGAACGAGTTGATAAAATAAATGAGGGCAGTAAACTCATCAAATCATGCCC
TACCGTTTATTATTCGATGGGTTATCCGTTATTTGCCCTGAATGCCGAGCGGTTCGAAACAAATCTTGTAGAAGCTGCAG
GCGGTATTTGTGTTAACAAAAGCCTTACCCGCAAAGGTAAACCGGGTGTTAATATATCGGTAAATGAGATAAATAAACTC
AGCCCTGAAATGATGTTTATCTCAGGATTCCTATCCTCACCAGCTTCAGACTACGTTCAATACTGTAAAAAACATGGAAT
TGACAATAAAGCCGTTCGGATAGGGAACATATGTAATGTACCCACAGGATGGGATTTTGGCAGCCCTCGCTGGATTCTTG
GATTCATGTTCCTTGCAAATACAATCCATCCAGAAATATACTCTTTCGACTTAGAAAATGAACAAAAAGAGTTTTATAAA
CGTTTTTATGGCATTGATGTAGAGAACGTTGTTACAAACCGTGACTTTTCAAGACCTGCAATAACTACAACTAAATAA

Upstream 100 bases:

>100_bases
AAAATGTACTTGATGAAATAGGCGTCTCATCTTACGAAATTATCCTTGAAGACGAAGGATTCTGGATTATAATCTCAAAA
ACCGACCAAGAGGTGATCTA

Downstream 100 bases:

>100_bases
CCATACCCTTGAATCACTCTTTTTTAATTTTGATTTTTTAAAACAGTTATAATTCTCTGCATATTTTAATGTGTAATTAA
TATTAGTTACTTTTTTATAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 585; Mature: 585

Protein sequence:

>585_residues
MKCTVCEIGCDISEGNYGRCNMYTNQNSKLIERFPNSYLTVLPITIETMPMVHFAPKNKFLQVSTVGCNFNCQGCISETL
TSNADALSGALTKASPTDIISRAKTEECRGIVFCLNDPAASYYTFLNLAKEAKKANLWVGCSTNGYFTETALKSLIPYLD
FVNIGLKGSSNARYKECGAKSAAPVFRNIRILHEAGVHVETSAMYINAGDEEILKAAEEVASVSKDIPLQVMRFVPFGEA
KPELEPTINKSEHIVDQLRSILNHVYLFNSPGTEYLTTKCPICGNEIIKREFYGPMGCRTIESLDEGKCPCGWQVPLKGP
INNEQFTEYGMLGGYRTTRAIEMAHAILFTLGIRDNEELGDILGDIIKEDFIRGLHDRIQQIDSWLELIKDLAMRTGREK
EGNELIAFIQERVDKINEGSKLIKSCPTVYYSMGYPLFALNAERFETNLVEAAGGICVNKSLTRKGKPGVNISVNEINKL
SPEMMFISGFLSSPASDYVQYCKKHGIDNKAVRIGNICNVPTGWDFGSPRWILGFMFLANTIHPEIYSFDLENEQKEFYK
RFYGIDVENVVTNRDFSRPAITTTK

Sequences:

>Translated_585_residues
MKCTVCEIGCDISEGNYGRCNMYTNQNSKLIERFPNSYLTVLPITIETMPMVHFAPKNKFLQVSTVGCNFNCQGCISETL
TSNADALSGALTKASPTDIISRAKTEECRGIVFCLNDPAASYYTFLNLAKEAKKANLWVGCSTNGYFTETALKSLIPYLD
FVNIGLKGSSNARYKECGAKSAAPVFRNIRILHEAGVHVETSAMYINAGDEEILKAAEEVASVSKDIPLQVMRFVPFGEA
KPELEPTINKSEHIVDQLRSILNHVYLFNSPGTEYLTTKCPICGNEIIKREFYGPMGCRTIESLDEGKCPCGWQVPLKGP
INNEQFTEYGMLGGYRTTRAIEMAHAILFTLGIRDNEELGDILGDIIKEDFIRGLHDRIQQIDSWLELIKDLAMRTGREK
EGNELIAFIQERVDKINEGSKLIKSCPTVYYSMGYPLFALNAERFETNLVEAAGGICVNKSLTRKGKPGVNISVNEINKL
SPEMMFISGFLSSPASDYVQYCKKHGIDNKAVRIGNICNVPTGWDFGSPRWILGFMFLANTIHPEIYSFDLENEQKEFYK
RFYGIDVENVVTNRDFSRPAITTTK
>Mature_585_residues
MKCTVCEIGCDISEGNYGRCNMYTNQNSKLIERFPNSYLTVLPITIETMPMVHFAPKNKFLQVSTVGCNFNCQGCISETL
TSNADALSGALTKASPTDIISRAKTEECRGIVFCLNDPAASYYTFLNLAKEAKKANLWVGCSTNGYFTETALKSLIPYLD
FVNIGLKGSSNARYKECGAKSAAPVFRNIRILHEAGVHVETSAMYINAGDEEILKAAEEVASVSKDIPLQVMRFVPFGEA
KPELEPTINKSEHIVDQLRSILNHVYLFNSPGTEYLTTKCPICGNEIIKREFYGPMGCRTIESLDEGKCPCGWQVPLKGP
INNEQFTEYGMLGGYRTTRAIEMAHAILFTLGIRDNEELGDILGDIIKEDFIRGLHDRIQQIDSWLELIKDLAMRTGREK
EGNELIAFIQERVDKINEGSKLIKSCPTVYYSMGYPLFALNAERFETNLVEAAGGICVNKSLTRKGKPGVNISVNEINKL
SPEMMFISGFLSSPASDYVQYCKKHGIDNKAVRIGNICNVPTGWDFGSPRWILGFMFLANTIHPEIYSFDLENEQKEFYK
RFYGIDVENVVTNRDFSRPAITTTK

Specific function: Unknown

COG id: COG1180

COG function: function code O; Pyruvate-formate lyase-activating enzyme

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006638
- InterPro:   IPR016431
- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 65390; Mature: 65390

Theoretical pI: Translated: 6.09; Mature: 6.09

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKCTVCEIGCDISEGNYGRCNMYTNQNSKLIERFPNSYLTVLPITIETMPMVHFAPKNKF
CCEEEEECCCCCCCCCCCEEEEEECCCHHHHHHCCCCEEEEEEEEEECCCEEEECCCCCE
LQVSTVGCNFNCQGCISETLTSNADALSGALTKASPTDIISRAKTEECRGIVFCLNDPAA
EEEEEECCCCCCHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHCCHHHHCEEEEEECCCHH
SYYTFLNLAKEAKKANLWVGCSTNGYFTETALKSLIPYLDFVNIGLKGSSNARYKECGAK
HHHHHHHHHHHHHHCCEEEEECCCCEEHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCC
SAAPVFRNIRILHEAGVHVETSAMYINAGDEEILKAAEEVASVSKDIPLQVMRFVPFGEA
CCCHHHHHHHHHHHCCCEEEEEEEEEECCHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCC
KPELEPTINKSEHIVDQLRSILNHVYLFNSPGTEYLTTKCPICGNEIIKREFYGPMGCRT
CCCCCCCCCHHHHHHHHHHHHHHHEEEECCCCCCEEEECCCCCCHHHHHHHHCCCCCCHH
IESLDEGKCPCGWQVPLKGPINNEQFTEYGMLGGYRTTRAIEMAHAILFTLGIRDNEELG
HHHHCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHH
DILGDIIKEDFIRGLHDRIQQIDSWLELIKDLAMRTGREKEGNELIAFIQERVDKINEGS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHH
KLIKSCPTVYYSMGYPLFALNAERFETNLVEAAGGICVNKSLTRKGKPGVNISVNEINKL
HHHHHCCHHEEECCCCEEEECHHHHHHHHHHHCCCEEECCCCCCCCCCCCEEEHHHHHHC
SPEMMFISGFLSSPASDYVQYCKKHGIDNKAVRIGNICNVPTGWDFGSPRWILGFMFLAN
CHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEECCEECCCCCCCCCCCHHHHHHHHHHH
TIHPEIYSFDLENEQKEFYKRFYGIDVENVVTNRDFSRPAITTTK
HCCCCEEEECCCCHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MKCTVCEIGCDISEGNYGRCNMYTNQNSKLIERFPNSYLTVLPITIETMPMVHFAPKNKF
CCEEEEECCCCCCCCCCCEEEEEECCCHHHHHHCCCCEEEEEEEEEECCCEEEECCCCCE
LQVSTVGCNFNCQGCISETLTSNADALSGALTKASPTDIISRAKTEECRGIVFCLNDPAA
EEEEEECCCCCCHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHCCHHHHCEEEEEECCCHH
SYYTFLNLAKEAKKANLWVGCSTNGYFTETALKSLIPYLDFVNIGLKGSSNARYKECGAK
HHHHHHHHHHHHHHCCEEEEECCCCEEHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCCC
SAAPVFRNIRILHEAGVHVETSAMYINAGDEEILKAAEEVASVSKDIPLQVMRFVPFGEA
CCCHHHHHHHHHHHCCCEEEEEEEEEECCHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCC
KPELEPTINKSEHIVDQLRSILNHVYLFNSPGTEYLTTKCPICGNEIIKREFYGPMGCRT
CCCCCCCCCHHHHHHHHHHHHHHHEEEECCCCCCEEEECCCCCCHHHHHHHHCCCCCCHH
IESLDEGKCPCGWQVPLKGPINNEQFTEYGMLGGYRTTRAIEMAHAILFTLGIRDNEELG
HHHHCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCCHHHH
DILGDIIKEDFIRGLHDRIQQIDSWLELIKDLAMRTGREKEGNELIAFIQERVDKINEGS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCHH
KLIKSCPTVYYSMGYPLFALNAERFETNLVEAAGGICVNKSLTRKGKPGVNISVNEINKL
HHHHHCCHHEEECCCCEEEECHHHHHHHHHHHCCCEEECCCCCCCCCCCCEEEHHHHHHC
SPEMMFISGFLSSPASDYVQYCKKHGIDNKAVRIGNICNVPTGWDFGSPRWILGFMFLAN
CHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEECCEECCCCCCCCCCCHHHHHHHHHHH
TIHPEIYSFDLENEQKEFYKRFYGIDVENVVTNRDFSRPAITTTK
HCCCCEEEECCCCHHHHHHHHHHCCCHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]