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The map label for this gene is 45358110

Identifier: 45358110

GI number: 45358110

Start: 551491

End: 552786

Strand: Direct

Name: 45358110

Synonym: MMP0547

Alternate gene names: NA

Gene position: 551491-552786 (Clockwise)

Preceding gene: 45358109

Following gene: 45358111

Centisome position: 33.2

GC content: 33.02

Gene sequence:

>1296_bases
ATGGATATACTCCCGATTGAAGACATTTCTAAATTTAACCAAATAACTGGAAAAATAAAAGAAAAAATAGAAAATTGTGA
CGGATTAATAAGAATCGTTACACATCACGACCCCGATGGACTGACCGCGGGTTCAATAATGTTGAAAACACTTCTAAGGT
TAAATAAAAATGTGCAAATGACTATTCTGGAGCATTTATCAAAAGAATCAGTCGAAGAACTTTCAAAAGAAAACGATAAA
ATGTTTATATTTTGTGACATGGGAAGTGGTCAGATTAATTTGATAAATCACCTTCAATTCAATGCAGTAATTCTCGACCA
CCACCCGCCTGAAGTTGCAGAAACCGAGATTGGAAATATTTTACAGTTAAATCCCCATTTATTTGGGGCAAACGGTGCAA
AAGAAATTTCTGCAAGTGGTGTTTGTTATTTAATTGCAAGATTGTTTGAGTACTACGATTTAGCAACTGTTGCAGTTGTT
GGAGCAATTGGGGACATGCAGCACCTGCCGTTTATTGGATTAAATAAATATATTTTAAATGAAGCTAGAAAATACCGTTA
TCTGAGCGTTATAAAAGATATTGTTTATAATTGTTACAATCTACCAATTTCAAGATCAATATACTACTCAACCCAACCTT
ACATTCGAGAATTGGATGGTATTGATAAAATAAAAGAAATTCTTGAAGAATTAAGTATAAATCCTGAAAAAAAAGGAATA
ACTGTGGCTGAAAAAGAAAATTTGCTCGAATATTTTAAACGTTTTAACAAAAATGACGATTTAATTGTTGATAGGTACGA
AATAAATCATAAATTAAACGATGCATTTTATCTTTCTGAAGTTTTAAATGCTTGCGGCAGAAAAGAGATGACCTCAGTAG
GAATTGGAATTTTGCTTGGAGATGACGAATGCATCAGACAGGGCGAGAATTTATACAAAGAATATAAGGATGAACTAATC
GGAGAATTAAAAAACGTAAAACTAACTTCAATGGATAATATTGAGTATTTTATCGGAGAAAAGGGAAAAACTGGTATAAT
ATCAGCTTTAATGGTAAAAGATAAACCAGTGCTTGGATTTAATGAGCAGGGTGAAATTTATAAGGTTTCTTCGAGGGGTA
GTAAAGAACTTGTTGAATGCGGGTTAAATCTTTCAAAAGCAATGGTTGTTTCAAAAGAATTTGGCGGAGATGGTGGGGGA
CACAATATCGCATCAGGTGCTGCGATTCAGAAAAACTACCTGAATGAATTTTTGGAAAAAGTTAACGAAATTGTGGGCGA
ACAGTTGAAAAAATAA

Upstream 100 bases:

>100_bases
GGCCCCGTAGTTGAAAAATCAACGTATACTGGATGTTAACCAATACTTTTTTTAATTTTGTCAAATATATTAAATATAAA
ACTTTTTTCAAGTGATTTTT

Downstream 100 bases:

>100_bases
ACTGTTAAACGATACCTGATTAAAAGTATAAATAACGGGATATAATATATTATTAGCCAAAAATTGGGGGATATCATGAG
AGCCTTCAAAGTAAAAAGAG

Product: RecJ-like protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 431; Mature: 431

Protein sequence:

>431_residues
MDILPIEDISKFNQITGKIKEKIENCDGLIRIVTHHDPDGLTAGSIMLKTLLRLNKNVQMTILEHLSKESVEELSKENDK
MFIFCDMGSGQINLINHLQFNAVILDHHPPEVAETEIGNILQLNPHLFGANGAKEISASGVCYLIARLFEYYDLATVAVV
GAIGDMQHLPFIGLNKYILNEARKYRYLSVIKDIVYNCYNLPISRSIYYSTQPYIRELDGIDKIKEILEELSINPEKKGI
TVAEKENLLEYFKRFNKNDDLIVDRYEINHKLNDAFYLSEVLNACGRKEMTSVGIGILLGDDECIRQGENLYKEYKDELI
GELKNVKLTSMDNIEYFIGEKGKTGIISALMVKDKPVLGFNEQGEIYKVSSRGSKELVECGLNLSKAMVVSKEFGGDGGG
HNIASGAAIQKNYLNEFLEKVNEIVGEQLKK

Sequences:

>Translated_431_residues
MDILPIEDISKFNQITGKIKEKIENCDGLIRIVTHHDPDGLTAGSIMLKTLLRLNKNVQMTILEHLSKESVEELSKENDK
MFIFCDMGSGQINLINHLQFNAVILDHHPPEVAETEIGNILQLNPHLFGANGAKEISASGVCYLIARLFEYYDLATVAVV
GAIGDMQHLPFIGLNKYILNEARKYRYLSVIKDIVYNCYNLPISRSIYYSTQPYIRELDGIDKIKEILEELSINPEKKGI
TVAEKENLLEYFKRFNKNDDLIVDRYEINHKLNDAFYLSEVLNACGRKEMTSVGIGILLGDDECIRQGENLYKEYKDELI
GELKNVKLTSMDNIEYFIGEKGKTGIISALMVKDKPVLGFNEQGEIYKVSSRGSKELVECGLNLSKAMVVSKEFGGDGGG
HNIASGAAIQKNYLNEFLEKVNEIVGEQLKK
>Mature_431_residues
MDILPIEDISKFNQITGKIKEKIENCDGLIRIVTHHDPDGLTAGSIMLKTLLRLNKNVQMTILEHLSKESVEELSKENDK
MFIFCDMGSGQINLINHLQFNAVILDHHPPEVAETEIGNILQLNPHLFGANGAKEISASGVCYLIARLFEYYDLATVAVV
GAIGDMQHLPFIGLNKYILNEARKYRYLSVIKDIVYNCYNLPISRSIYYSTQPYIRELDGIDKIKEILEELSINPEKKGI
TVAEKENLLEYFKRFNKNDDLIVDRYEINHKLNDAFYLSEVLNACGRKEMTSVGIGILLGDDECIRQGENLYKEYKDELI
GELKNVKLTSMDNIEYFIGEKGKTGIISALMVKDKPVLGFNEQGEIYKVSSRGSKELVECGLNLSKAMVVSKEFGGDGGG
HNIASGAAIQKNYLNEFLEKVNEIVGEQLKK

Specific function: Unknown

COG id: COG0608

COG function: function code L; Single-stranded DNA-specific exonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.jannaschii MJ0977 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003156
- InterPro:   IPR001667 [H]

Pfam domain/function: PF01368 DHH; PF02272 DHHA1 [H]

EC number: NA

Molecular weight: Translated: 48542; Mature: 48542

Theoretical pI: Translated: 5.17; Mature: 5.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDILPIEDISKFNQITGKIKEKIENCDGLIRIVTHHDPDGLTAGSIMLKTLLRLNKNVQM
CCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCH
TILEHLSKESVEELSKENDKMFIFCDMGSGQINLINHLQFNAVILDHHPPEVAETEIGNI
HHHHHHCHHHHHHHHCCCCCEEEEEECCCCCEEEEEEEEEEEEEECCCCCCHHHHCCCCE
LQLNPHLFGANGAKEISASGVCYLIARLFEYYDLATVAVVGAIGDMQHLPFIGLNKYILN
EEECCEEECCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH
EARKYRYLSVIKDIVYNCYNLPISRSIYYSTQPYIRELDGIDKIKEILEELSINPEKKGI
HHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHCCHHHHHHHHHHHCCCCCCCCC
TVAEKENLLEYFKRFNKNDDLIVDRYEINHKLNDAFYLSEVLNACGRKEMTSVGIGILLG
CHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCHHHHHCCEEEEEC
DDECIRQGENLYKEYKDELIGELKNVKLTSMDNIEYFIGEKGKTGIISALMVKDKPVLGF
CHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCEEECCCCCCCHHHEEEECCCCCCCC
NEQGEIYKVSSRGSKELVECGLNLSKAMVVSKEFGGDGGGHNIASGAAIQKNYLNEFLEK
CCCCCEEEECCCCCHHHHHHCCCHHHHHEEEHHCCCCCCCCCCCCCHHHHHHHHHHHHHH
VNEIVGEQLKK
HHHHHHHHHCC
>Mature Secondary Structure
MDILPIEDISKFNQITGKIKEKIENCDGLIRIVTHHDPDGLTAGSIMLKTLLRLNKNVQM
CCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCH
TILEHLSKESVEELSKENDKMFIFCDMGSGQINLINHLQFNAVILDHHPPEVAETEIGNI
HHHHHHCHHHHHHHHCCCCCEEEEEECCCCCEEEEEEEEEEEEEECCCCCCHHHHCCCCE
LQLNPHLFGANGAKEISASGVCYLIARLFEYYDLATVAVVGAIGDMQHLPFIGLNKYILN
EEECCEEECCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHH
EARKYRYLSVIKDIVYNCYNLPISRSIYYSTQPYIRELDGIDKIKEILEELSINPEKKGI
HHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHCCHHHHHHHHHHHCCCCCCCCC
TVAEKENLLEYFKRFNKNDDLIVDRYEINHKLNDAFYLSEVLNACGRKEMTSVGIGILLG
CHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCHHHHHHHHHHHCCCHHHHHCCEEEEEC
DDECIRQGENLYKEYKDELIGELKNVKLTSMDNIEYFIGEKGKTGIISALMVKDKPVLGF
CHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCEEECCCCCCCHHHEEEECCCCCCCC
NEQGEIYKVSSRGSKELVECGLNLSKAMVVSKEFGGDGGGHNIASGAAIQKNYLNEFLEK
CCCCCEEEECCCCCHHHHHHCCCHHHHHEEEHHCCCCCCCCCCCCCHHHHHHHHHHHHHH
VNEIVGEQLKK
HHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]