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The map label for this gene is 45358109

Identifier: 45358109

GI number: 45358109

Start: 550818

End: 551429

Strand: Direct

Name: 45358109

Synonym: MMP0546

Alternate gene names: NA

Gene position: 550818-551429 (Clockwise)

Preceding gene: 45358108

Following gene: 45358110

Centisome position: 33.16

GC content: 36.76

Gene sequence:

>612_bases
TTGAAACTAACGCTTGAAGAGGGGACTTCATTAGTCGGTTATGTTAGGAATGTTATAAAGCAGTATTTAAAAGGCGAAGA
ACCAGATATCCAAAAATATCCGGATAAATTTAATAATGTTTTTGGGGTATTTGTATCGCTTCATACGCATCCTGAACACG
ATTTAAGGGGATGTATCGGAATTCCTGAGCCAACAATGTCATTAATCGATGCAATAAAAGAAACATCGATAAGTGCAGCG
GTTCATGATCCTAGATTCCAGCCATTAAAACATTCTGAACTTAAAAATACGATTATAGAAGTTAGTGTTTTAACACCTCC
TGAAGATGTCGAAGTCGAAGATTCGATGGAATATCTAGAAAAACTTGAAGTTGGAAGGGATGGACTTATTATTGAATTTG
GACCATACCGGGGGCTGTTACTTCCACAAGTGGCTACAGAATATAATTGGGATACAAAACAGTTTTTATCCAATCTCTGT
TTAAAGGCGGGACTTCCCACAACTGCTTGGATAGAATATGACGTTAAAATAAAGTCTTTTCAAGCACAGGTGTTTGAAGA
ACTTATTCCAAATGGCCCCGTAGTTGAAAAATCAACGTATACTGGATGTTAA

Upstream 100 bases:

>100_bases
TTTCCAAAAATTATTCCAATTTATAAATTAATCGATAAAAAGGCGATATAATAAAATAAATGGCTTATTTTAGTTTTTAT
ATTAAAAGGGGGGATTTAAA

Downstream 100 bases:

>100_bases
CCAATACTTTTTTTAATTTTGTCAAATATATTAAATATAAAACTTTTTTCAAGTGATTTTTATGGATATACTCCCGATTG
AAGACATTTCTAAATTTAAC

Product: AMMECR1 domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 203; Mature: 203

Protein sequence:

>203_residues
MKLTLEEGTSLVGYVRNVIKQYLKGEEPDIQKYPDKFNNVFGVFVSLHTHPEHDLRGCIGIPEPTMSLIDAIKETSISAA
VHDPRFQPLKHSELKNTIIEVSVLTPPEDVEVEDSMEYLEKLEVGRDGLIIEFGPYRGLLLPQVATEYNWDTKQFLSNLC
LKAGLPTTAWIEYDVKIKSFQAQVFEELIPNGPVVEKSTYTGC

Sequences:

>Translated_203_residues
MKLTLEEGTSLVGYVRNVIKQYLKGEEPDIQKYPDKFNNVFGVFVSLHTHPEHDLRGCIGIPEPTMSLIDAIKETSISAA
VHDPRFQPLKHSELKNTIIEVSVLTPPEDVEVEDSMEYLEKLEVGRDGLIIEFGPYRGLLLPQVATEYNWDTKQFLSNLC
LKAGLPTTAWIEYDVKIKSFQAQVFEELIPNGPVVEKSTYTGC
>Mature_203_residues
MKLTLEEGTSLVGYVRNVIKQYLKGEEPDIQKYPDKFNNVFGVFVSLHTHPEHDLRGCIGIPEPTMSLIDAIKETSISAA
VHDPRFQPLKHSELKNTIIEVSVLTPPEDVEVEDSMEYLEKLEVGRDGLIIEFGPYRGLLLPQVATEYNWDTKQFLSNLC
LKAGLPTTAWIEYDVKIKSFQAQVFEELIPNGPVVEKSTYTGC

Specific function: Unknown

COG id: COG2078

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 AMMECR1 domain [H]

Homologues:

Organism=Homo sapiens, GI42544151, Length=181, Percent_Identity=30.939226519337, Blast_Score=77, Evalue=1e-14,
Organism=Homo sapiens, GI7669554, Length=159, Percent_Identity=31.4465408805031, Blast_Score=69, Evalue=4e-12,
Organism=Homo sapiens, GI284413707, Length=157, Percent_Identity=32.484076433121, Blast_Score=69, Evalue=4e-12,
Organism=Drosophila melanogaster, GI281362408, Length=153, Percent_Identity=30.718954248366, Blast_Score=68, Evalue=4e-12,
Organism=Drosophila melanogaster, GI24649478, Length=153, Percent_Identity=30.718954248366, Blast_Score=68, Evalue=4e-12,
Organism=Drosophila melanogaster, GI24649480, Length=153, Percent_Identity=30.718954248366, Blast_Score=68, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002733 [H]

Pfam domain/function: PF01871 AMMECR1 [H]

EC number: NA

Molecular weight: Translated: 22912; Mature: 22912

Theoretical pI: Translated: 4.58; Mature: 4.58

Prosite motif: PS51112 AMMECR1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLTLEEGTSLVGYVRNVIKQYLKGEEPDIQKYPDKFNNVFGVFVSLHTHPEHDLRGCIG
CEEEHHHCCHHHHHHHHHHHHHHCCCCCCHHHCCHHHHHHEEEEEEEECCCCHHHCCCCC
IPEPTMSLIDAIKETSISAAVHDPRFQPLKHSELKNTIIEVSVLTPPEDVEVEDSMEYLE
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCEEEEEEEECCCCCCCHHHHHHHHH
KLEVGRDGLIIEFGPYRGLLLPQVATEYNWDTKQFLSNLCLKAGLPTTAWIEYDVKIKSF
HHHCCCCCEEEEECCCCCEECHHHHHCCCCCHHHHHHHHHHHCCCCCCEEEEEEEEHHHH
QAQVFEELIPNGPVVEKSTYTGC
HHHHHHHHCCCCCEECCCCCCCC
>Mature Secondary Structure
MKLTLEEGTSLVGYVRNVIKQYLKGEEPDIQKYPDKFNNVFGVFVSLHTHPEHDLRGCIG
CEEEHHHCCHHHHHHHHHHHHHHCCCCCCHHHCCHHHHHHEEEEEEEECCCCHHHCCCCC
IPEPTMSLIDAIKETSISAAVHDPRFQPLKHSELKNTIIEVSVLTPPEDVEVEDSMEYLE
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCEEEEEEEECCCCCCCHHHHHHHHH
KLEVGRDGLIIEFGPYRGLLLPQVATEYNWDTKQFLSNLCLKAGLPTTAWIEYDVKIKSF
HHHCCCCCEEEEECCCCCEECHHHHHCCCCCHHHHHHHHHHHCCCCCCEEEEEEEEHHHH
QAQVFEELIPNGPVVEKSTYTGC
HHHHHHHHCCCCCEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]