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The map label for this gene is 45357896

Identifier: 45357896

GI number: 45357896

Start: 330681

End: 331394

Strand: Direct

Name: 45357896

Synonym: MMP0333

Alternate gene names: NA

Gene position: 330681-331394 (Clockwise)

Preceding gene: 45357895

Following gene: 45357897

Centisome position: 19.91

GC content: 35.99

Gene sequence:

>714_bases
ATGGACATGTTATTGAAGATAATTTATTCGGCAGCAATCACGGGACTACTTGCGGCACTAATTTATAAAAAGAAGTATCT
CGACAAATGGGGGATATTCGGATCTTCGGTAATGGCATTTACAATATTGTTTTTGGCAGATTTAAAATGGCTACTGCTCC
TTATCTCGTTTTTAGTTCTGGGCAGTCTCGTAAGTAAAATGGGTTATGGTTTTAAAAAGACAATAAAAATGGCTGAATCA
AGACGTTCTTTGAAAAATGTTCTTGCAAATGGGCTCATGGCAATATTATTTGTTTTAGCGTATTCTTCTGGATTTATTAC
AGAAGAAATAGCCCTTGTGGGATACGTTGGAGCAATTGCAGCTGCAAATTCTGATACTTTTTCATCCGAACTTGGAATGC
TTTCAAGAGAAACTCCAAGGCTCATATCAAATTTTAAAACCGTTAAAACTGGAACCGATGGTGGAATAACTGTATGCGGT
ACTTTTGCAGGGTTACTTGGATCTTTTTTGATAGGTTTACTCGCATATGCTCTTTTTAATGATATATTGATGTTTTGGAC
TGCAACAATTTCTGGAATGATCGGTAACTTTGCAGATAGCTTTCTTGGTGCATTTTTCGAGCGAAAAGGAATATTAAATA
ACGAACACGTAAATTTCATGGCAACGTTAAGTGGCGGAACATTTGCAGTTTTATTTTACCAGCTTGTACTTTAA

Upstream 100 bases:

>100_bases
CTGATTTTTCCCGTATTATAATATAATAATGAATTTAATTTTAGGCTAGGTATCGTAAGATTTAATAATCTTTTGTGTTT
ATGAATGTATGGTGAATTTA

Downstream 100 bases:

>100_bases
AATAAGCTGGCTTTTCTGTTTTTCGGGTGAGGTAATAATTAACTTATTTTTTAATTTTTTCAAAGATTATATTTTTAACG
ATAGTTAATATTTAATCAGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 237; Mature: 237

Protein sequence:

>237_residues
MDMLLKIIYSAAITGLLAALIYKKKYLDKWGIFGSSVMAFTILFLADLKWLLLLISFLVLGSLVSKMGYGFKKTIKMAES
RRSLKNVLANGLMAILFVLAYSSGFITEEIALVGYVGAIAAANSDTFSSELGMLSRETPRLISNFKTVKTGTDGGITVCG
TFAGLLGSFLIGLLAYALFNDILMFWTATISGMIGNFADSFLGAFFERKGILNNEHVNFMATLSGGTFAVLFYQLVL

Sequences:

>Translated_237_residues
MDMLLKIIYSAAITGLLAALIYKKKYLDKWGIFGSSVMAFTILFLADLKWLLLLISFLVLGSLVSKMGYGFKKTIKMAES
RRSLKNVLANGLMAILFVLAYSSGFITEEIALVGYVGAIAAANSDTFSSELGMLSRETPRLISNFKTVKTGTDGGITVCG
TFAGLLGSFLIGLLAYALFNDILMFWTATISGMIGNFADSFLGAFFERKGILNNEHVNFMATLSGGTFAVLFYQLVL
>Mature_237_residues
MDMLLKIIYSAAITGLLAALIYKKKYLDKWGIFGSSVMAFTILFLADLKWLLLLISFLVLGSLVSKMGYGFKKTIKMAES
RRSLKNVLANGLMAILFVLAYSSGFITEEIALVGYVGAIAAANSDTFSSELGMLSRETPRLISNFKTVKTGTDGGITVCG
TFAGLLGSFLIGLLAYALFNDILMFWTATISGMIGNFADSFLGAFFERKGILNNEHVNFMATLSGGTFAVLFYQLVL

Specific function: Unknown

COG id: COG1836

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TMEM19 family [H]

Homologues:

Organism=Homo sapiens, GI21361720, Length=234, Percent_Identity=28.6324786324786, Blast_Score=73, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002794 [H]

Pfam domain/function: PF01940 DUF92 [H]

EC number: NA

Molecular weight: Translated: 25730; Mature: 25730

Theoretical pI: Translated: 9.67; Mature: 9.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDMLLKIIYSAAITGLLAALIYKKKYLDKWGIFGSSVMAFTILFLADLKWLLLLISFLVL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
GSLVSKMGYGFKKTIKMAESRRSLKNVLANGLMAILFVLAYSSGFITEEIALVGYVGAIA
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
AANSDTFSSELGMLSRETPRLISNFKTVKTGTDGGITVCGTFAGLLGSFLIGLLAYALFN
HCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
DILMFWTATISGMIGNFADSFLGAFFERKGILNNEHVNFMATLSGGTFAVLFYQLVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHHHHC
>Mature Secondary Structure
MDMLLKIIYSAAITGLLAALIYKKKYLDKWGIFGSSVMAFTILFLADLKWLLLLISFLVL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
GSLVSKMGYGFKKTIKMAESRRSLKNVLANGLMAILFVLAYSSGFITEEIALVGYVGAIA
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
AANSDTFSSELGMLSRETPRLISNFKTVKTGTDGGITVCGTFAGLLGSFLIGLLAYALFN
HCCCCHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
DILMFWTATISGMIGNFADSFLGAFFERKGILNNEHVNFMATLSGGTFAVLFYQLVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]