Click here to switch to the map view.

The map label for this gene is 45357895

Identifier: 45357895

GI number: 45357895

Start: 328459

End: 330339

Strand: Direct

Name: 45357895

Synonym: MMP0332

Alternate gene names: NA

Gene position: 328459-330339 (Clockwise)

Preceding gene: 45357893

Following gene: 45357896

Centisome position: 19.77

GC content: 28.76

Gene sequence:

>1881_bases
TTGTATCTTTCAAAAGTACATATTGAAAATTATCGATCAATTAAAGAATTAGATTTGACTTTCGATCAAGGCAAAAATGT
AATTGTTGGTAAAAATAATGCAGGTAAAAGTAACATTATAAAAGCAATTGATATCGTACTCGGTGAACGAGTGCCCGATT
GGAATAAATATGAGAATATATCTAAATCAGATTTTTTTAATGCGGATACTTCTGAAGATATATTAATAGTTTGTGAATTA
AGCAAAGAACACGGTGAAAACCTCAAATTTTCGAATGTAAACAATTCTGCTTTTTTTAAAGTCTGTAAAAGTAATAATGA
ACAATATCATGTGAATGATTTATCAGATATCGATCGAATATTCTATTTTACCTCTGAAAAAGGTTCAATAGATTTAGATT
CTGGAATTTATCGAAAAATATGGATTGGAGGAAAAAATTACTGCAAAATTGATTATGATGATGAATTTAGCAACGTAGAT
CGATATGCGCTTGTATTTAGGGCAAGATTTGAAGAAAATGTTATCAAAAAAGACCTTGTGTTATTATACAAAAAAGACGA
TGAAGAAGAATGGACTGTAGGGATAAATGCAAACTCATTAAGGGGTAATTTAATACAAAGTGCAATAATTCCATCATTTA
GGGATCCAAAAGATCAATTGAGGATAAATAACTACACTTGGTTTGGAAAGCTTTTAAAAGAATATACTAAAGGAAGAAAT
GGGGAGGGTATAAAAGAAGCACTTAAAAATCTAGCGACGGAATCTAATCAGGTATTTGAAGAACTCCAAAAAAGTGTATG
CAACGATAACATACAAATTGCATTTCCAAATACCTCTTTTTCAGTACAGTACAATCCTGATCCAAAAGATCAGGATATTT
ATAAAAGTGCTCTTATATATGTAGATGATGGCTTCAAAAGTGAATTAAAGGACAAAGGTTCGGGGATTCAGAGTGCAATG
ACTATTGGATTATTTAATTTTTATATCAAACATATTGCACATAATTCTGGTTCTTTATTGGCTATAGAAGAACCGGAATT
GTATTTACATCCTCATGGTAGGCGAATTATTTCTGATAGGCTTAGTGAATTTATTGGTGAAGATGAAAATCAGGTAATAC
TTACAACACATTCTCCGGAGTTTATATGCTGTGCAAATGAAAATATCAACTTAATTGTGGTTAAAAAGGACAAAAGTGAG
TCAAAAGCGTATAATTTGCAGTTTAATGATATAAAAACCAGACAAATTCTTATTAAAAAACAAAATTCTGAAATGTTTTT
TGCAGATGCGGTTTTATTGGTCGAAGGTGCTGATAAATATATTTTGGAAGAGTTTTCAAAAGAATATGGGGAAACTAAAC
AGGTTAAATCTGAATCAGAACTTCTTGGGAAAAATTGGTTAAATAATTATAATGTTTCAATAATAAACTGTGGTGGAAAA
ACCGAATTACAAAAGTACGTGGCAGTATTAAATAACTTATCAATTCCTAATTATACATTAGCAGATTTTGATTTTTTTAG
GAACGATCTTAACAGTTATTTACAATTTTTAGGTTTTAATGATTTGAAAAATGAGTTAAATGGATTAAAATCTAAATTTA
CCTTTTTAAACAAGGGTAAATGTATCGATGATGTACCTGATGATTTTAAAAAAGATGTCATAGAGTATTTAAAAAAATTG
CACGAAATAAATTTATACATATTATCTGGTGAACTCGAAAATTTTTATTTTAAAAAACCTTATCATAGTAAAGAACAAGG
GGTTTTGGAACTCATCTGCAAAACGTTATGTGAAAATAGAGGAATAACTGAGTATGTGAATACAGATGAGTTTGAGGAAT
TATTTGATTTGTTTTTAAAAAAATGTTTGAAGTTAAATTAA

Upstream 100 bases:

>100_bases
AAAAATGATATTTTTAATTTTAAAATGTTGTTTTATTTCGTAAAATTAATATTCTTTTAAATCGAATCTTTTTATAAAAA
TAATCGAGTGGGGCGATTTT

Downstream 100 bases:

>100_bases
TAACTTCAAAAAATTTTAAAAATAGCCGTTACCAATTTTTACGGGGTGTTGGACCGCAATACTTTATATACTGGGTTAGA
CATAATTATTTTTCGAAATT

Product: hypothetical protein

Products: NA

Alternate protein names: SMC Domain Protein; ATP-Dependent Endonuclease Of OLD Family; Smc Domain Protein; SMC Protein-Like Protein; Overcoming Lysogenization Defect Protein; ATP-Dependent Endonuclease Of OLD Family-Like Protein; OLD Protein

Number of amino acids: Translated: 626; Mature: 626

Protein sequence:

>626_residues
MYLSKVHIENYRSIKELDLTFDQGKNVIVGKNNAGKSNIIKAIDIVLGERVPDWNKYENISKSDFFNADTSEDILIVCEL
SKEHGENLKFSNVNNSAFFKVCKSNNEQYHVNDLSDIDRIFYFTSEKGSIDLDSGIYRKIWIGGKNYCKIDYDDEFSNVD
RYALVFRARFEENVIKKDLVLLYKKDDEEEWTVGINANSLRGNLIQSAIIPSFRDPKDQLRINNYTWFGKLLKEYTKGRN
GEGIKEALKNLATESNQVFEELQKSVCNDNIQIAFPNTSFSVQYNPDPKDQDIYKSALIYVDDGFKSELKDKGSGIQSAM
TIGLFNFYIKHIAHNSGSLLAIEEPELYLHPHGRRIISDRLSEFIGEDENQVILTTHSPEFICCANENINLIVVKKDKSE
SKAYNLQFNDIKTRQILIKKQNSEMFFADAVLLVEGADKYILEEFSKEYGETKQVKSESELLGKNWLNNYNVSIINCGGK
TELQKYVAVLNNLSIPNYTLADFDFFRNDLNSYLQFLGFNDLKNELNGLKSKFTFLNKGKCIDDVPDDFKKDVIEYLKKL
HEINLYILSGELENFYFKKPYHSKEQGVLELICKTLCENRGITEYVNTDEFEELFDLFLKKCLKLN

Sequences:

>Translated_626_residues
MYLSKVHIENYRSIKELDLTFDQGKNVIVGKNNAGKSNIIKAIDIVLGERVPDWNKYENISKSDFFNADTSEDILIVCEL
SKEHGENLKFSNVNNSAFFKVCKSNNEQYHVNDLSDIDRIFYFTSEKGSIDLDSGIYRKIWIGGKNYCKIDYDDEFSNVD
RYALVFRARFEENVIKKDLVLLYKKDDEEEWTVGINANSLRGNLIQSAIIPSFRDPKDQLRINNYTWFGKLLKEYTKGRN
GEGIKEALKNLATESNQVFEELQKSVCNDNIQIAFPNTSFSVQYNPDPKDQDIYKSALIYVDDGFKSELKDKGSGIQSAM
TIGLFNFYIKHIAHNSGSLLAIEEPELYLHPHGRRIISDRLSEFIGEDENQVILTTHSPEFICCANENINLIVVKKDKSE
SKAYNLQFNDIKTRQILIKKQNSEMFFADAVLLVEGADKYILEEFSKEYGETKQVKSESELLGKNWLNNYNVSIINCGGK
TELQKYVAVLNNLSIPNYTLADFDFFRNDLNSYLQFLGFNDLKNELNGLKSKFTFLNKGKCIDDVPDDFKKDVIEYLKKL
HEINLYILSGELENFYFKKPYHSKEQGVLELICKTLCENRGITEYVNTDEFEELFDLFLKKCLKLN
>Mature_626_residues
MYLSKVHIENYRSIKELDLTFDQGKNVIVGKNNAGKSNIIKAIDIVLGERVPDWNKYENISKSDFFNADTSEDILIVCEL
SKEHGENLKFSNVNNSAFFKVCKSNNEQYHVNDLSDIDRIFYFTSEKGSIDLDSGIYRKIWIGGKNYCKIDYDDEFSNVD
RYALVFRARFEENVIKKDLVLLYKKDDEEEWTVGINANSLRGNLIQSAIIPSFRDPKDQLRINNYTWFGKLLKEYTKGRN
GEGIKEALKNLATESNQVFEELQKSVCNDNIQIAFPNTSFSVQYNPDPKDQDIYKSALIYVDDGFKSELKDKGSGIQSAM
TIGLFNFYIKHIAHNSGSLLAIEEPELYLHPHGRRIISDRLSEFIGEDENQVILTTHSPEFICCANENINLIVVKKDKSE
SKAYNLQFNDIKTRQILIKKQNSEMFFADAVLLVEGADKYILEEFSKEYGETKQVKSESELLGKNWLNNYNVSIINCGGK
TELQKYVAVLNNLSIPNYTLADFDFFRNDLNSYLQFLGFNDLKNELNGLKSKFTFLNKGKCIDDVPDDFKKDVIEYLKKL
HEINLYILSGELENFYFKKPYHSKEQGVLELICKTLCENRGITEYVNTDEFEELFDLFLKKCLKLN

Specific function: Unknown

COG id: COG3593

COG function: function code L; Predicted ATP-dependent endonuclease of the OLD family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 72327; Mature: 72327

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYLSKVHIENYRSIKELDLTFDQGKNVIVGKNNAGKSNIIKAIDIVLGERVPDWNKYENI
CCCEEEEHHHHCCHHHHEEECCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCHHHCCC
SKSDFFNADTSEDILIVCELSKEHGENLKFSNVNNSAFFKVCKSNNEQYHVNDLSDIDRI
CCCCCCCCCCCCCEEEEEEECCCCCCCCEEECCCCHHEEEEECCCCCEEEECCHHHHCEE
FYFTSEKGSIDLDSGIYRKIWIGGKNYCKIDYDDEFSNVDRYALVFRARFEENVIKKDLV
EEEECCCCCEECCCCCEEEEEECCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCEE
LLYKKDDEEEWTVGINANSLRGNLIQSAIIPSFRDPKDQLRINNYTWFGKLLKEYTKGRN
EEEECCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCHHHEEECCCHHHHHHHHHHHCCCC
GEGIKEALKNLATESNQVFEELQKSVCNDNIQIAFPNTSFSVQYNPDPKDQDIYKSALIY
CCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCEEEECCCEEEEEECCCCCCHHHHEEEEEE
VDDGFKSELKDKGSGIQSAMTIGLFNFYIKHIAHNSGSLLAIEEPELYLHPHGRRIISDR
EECCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEECCCCCHHHHHH
LSEFIGEDENQVILTTHSPEFICCANENINLIVVKKDKSESKAYNLQFNDIKTRQILIKK
HHHHHCCCCCEEEEEECCCCEEEECCCCEEEEEEECCCCCCCEEEEEECCCCEEEEEEEE
QNSEMFFADAVLLVEGADKYILEEFSKEYGETKQVKSESELLGKNWLNNYNVSIINCGGK
CCCCEEEEEEEEEEECCCHHHHHHHHHHHCCHHHHCCHHHHHHHHCCCCCCEEEEECCCH
TELQKYVAVLNNLSIPNYTLADFDFFRNDLNSYLQFLGFNDLKNELNGLKSKFTFLNKGK
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCC
CIDDVPDDFKKDVIEYLKKLHEINLYILSGELENFYFKKPYHSKEQGVLELICKTLCENR
CCCCCCHHHHHHHHHHHHHHHHCEEEEEECCCCCEEECCCCCCCHHHHHHHHHHHHHCCC
GITEYVNTDEFEELFDLFLKKCLKLN
CCCHHCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MYLSKVHIENYRSIKELDLTFDQGKNVIVGKNNAGKSNIIKAIDIVLGERVPDWNKYENI
CCCEEEEHHHHCCHHHHEEECCCCCEEEEECCCCCHHHHHHHHHHHHCCCCCCCHHHCCC
SKSDFFNADTSEDILIVCELSKEHGENLKFSNVNNSAFFKVCKSNNEQYHVNDLSDIDRI
CCCCCCCCCCCCCEEEEEEECCCCCCCCEEECCCCHHEEEEECCCCCEEEECCHHHHCEE
FYFTSEKGSIDLDSGIYRKIWIGGKNYCKIDYDDEFSNVDRYALVFRARFEENVIKKDLV
EEEECCCCCEECCCCCEEEEEECCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCEE
LLYKKDDEEEWTVGINANSLRGNLIQSAIIPSFRDPKDQLRINNYTWFGKLLKEYTKGRN
EEEECCCCCCEEEEECCCCHHHHHHHHHHCCCCCCCHHHEEECCCHHHHHHHHHHHCCCC
GEGIKEALKNLATESNQVFEELQKSVCNDNIQIAFPNTSFSVQYNPDPKDQDIYKSALIY
CCHHHHHHHHHHCCHHHHHHHHHHHHCCCCCEEEECCCEEEEEECCCCCCHHHHEEEEEE
VDDGFKSELKDKGSGIQSAMTIGLFNFYIKHIAHNSGSLLAIEEPELYLHPHGRRIISDR
EECCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCEEECCCCCHHHHHH
LSEFIGEDENQVILTTHSPEFICCANENINLIVVKKDKSESKAYNLQFNDIKTRQILIKK
HHHHHCCCCCEEEEEECCCCEEEECCCCEEEEEEECCCCCCCEEEEEECCCCEEEEEEEE
QNSEMFFADAVLLVEGADKYILEEFSKEYGETKQVKSESELLGKNWLNNYNVSIINCGGK
CCCCEEEEEEEEEEECCCHHHHHHHHHHHCCHHHHCCHHHHHHHHCCCCCCEEEEECCCH
TELQKYVAVLNNLSIPNYTLADFDFFRNDLNSYLQFLGFNDLKNELNGLKSKFTFLNKGK
HHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCC
CIDDVPDDFKKDVIEYLKKLHEINLYILSGELENFYFKKPYHSKEQGVLELICKTLCENR
CCCCCCHHHHHHHHHHHHHHHHCEEEEEECCCCCEEECCCCCCCHHHHHHHHHHHHHCCC
GITEYVNTDEFEELFDLFLKKCLKLN
CCCHHCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA