Definition Bdellovibrio bacteriovorus HD100, complete genome.
Accession NC_005363
Length 3,782,950

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The map label for this gene is 42523506

Identifier: 42523506

GI number: 42523506

Start: 1940544

End: 1940924

Strand: Direct

Name: 42523506

Synonym: Bd2032

Alternate gene names: NA

Gene position: 1940544-1940924 (Clockwise)

Preceding gene: 42523505

Following gene: 42523510

Centisome position: 51.3

GC content: 48.82

Gene sequence:

>381_bases
ATGAAAAAGCTTTTGTTGGTTTTGTCAGTTATGGGATCTTTGGCAGCGTGCAGTCACGGGAACTGCCGCGCCCAGAAGGA
AGCTCAGAAAAACGCCCCTAAAAGCGAGGTTGTTGTGGAAAAATCCAAAGCCACGGATCGTGTGAAGGTGTTTAAGTACG
ACGGATCTTTGCAGTGCGGTCAGGGTAAAAAAATCGCCCCGGCTGAAATGCAAAAAGACCTCAAGGGTATTGAGGTCTTT
TCTTCATCCAATCAGAATGACGGGATGATGCGTATTCAACTTTGCGGAAGCCCGACAGGCAACGCCAATGTCTACGAGAT
CGATCGTAAGGACCTGGACGCTGCCCTGAAGCTGGGCTTTAAAGAGTGGTTGGCTGAATAA

Upstream 100 bases:

>100_bases
GGATGAAAAGGCGGGCCGAGTTTACTTTATTTCCGGCGAAGCGAATTTGTATGCGATCGACGCCGGATGGATCAGAACCC
CTTACTTTTAGGAGTAAGTC

Downstream 100 bases:

>100_bases
GCAAACGCTCTTTGATTCTTTCTGTCGGGAGAGGACCTTCTCCCGGCACGTAGCGACCATCGATCACCATCACTTCATTT
GGTTTCTCAACGTTTCTTAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 126; Mature: 126

Protein sequence:

>126_residues
MKKLLLVLSVMGSLAACSHGNCRAQKEAQKNAPKSEVVVEKSKATDRVKVFKYDGSLQCGQGKKIAPAEMQKDLKGIEVF
SSSNQNDGMMRIQLCGSPTGNANVYEIDRKDLDAALKLGFKEWLAE

Sequences:

>Translated_126_residues
MKKLLLVLSVMGSLAACSHGNCRAQKEAQKNAPKSEVVVEKSKATDRVKVFKYDGSLQCGQGKKIAPAEMQKDLKGIEVF
SSSNQNDGMMRIQLCGSPTGNANVYEIDRKDLDAALKLGFKEWLAE
>Mature_126_residues
MKKLLLVLSVMGSLAACSHGNCRAQKEAQKNAPKSEVVVEKSKATDRVKVFKYDGSLQCGQGKKIAPAEMQKDLKGIEVF
SSSNQNDGMMRIQLCGSPTGNANVYEIDRKDLDAALKLGFKEWLAE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13764; Mature: 13764

Theoretical pI: Translated: 9.28; Mature: 9.28

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
7.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLLLVLSVMGSLAACSHGNCRAQKEAQKNAPKSEVVVEKSKATDRVKVFKYDGSLQCG
CHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCEEEECCCCCCEEEEEEECCCEECC
QGKKIAPAEMQKDLKGIEVFSSSNQNDGMMRIQLCGSPTGNANVYEIDRKDLDAALKLGF
CCCCCCHHHHHHHHHHHEEECCCCCCCCEEEEEECCCCCCCCEEEEECHHHHHHHHHHCH
KEWLAE
HHHHCC
>Mature Secondary Structure
MKKLLLVLSVMGSLAACSHGNCRAQKEAQKNAPKSEVVVEKSKATDRVKVFKYDGSLQCG
CHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCCCCEEEECCCCCCEEEEEEECCCEECC
QGKKIAPAEMQKDLKGIEVFSSSNQNDGMMRIQLCGSPTGNANVYEIDRKDLDAALKLGF
CCCCCCHHHHHHHHHHHEEECCCCCCCCEEEEEECCCCCCCCEEEEECHHHHHHHHHHCH
KEWLAE
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA