Definition Bdellovibrio bacteriovorus HD100, complete genome.
Accession NC_005363
Length 3,782,950

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The map label for this gene is 42523384

Identifier: 42523384

GI number: 42523384

Start: 1824364

End: 1825113

Strand: Direct

Name: 42523384

Synonym: Bd1905

Alternate gene names: NA

Gene position: 1824364-1825113 (Clockwise)

Preceding gene: 42523381

Following gene: 42523385

Centisome position: 48.23

GC content: 53.47

Gene sequence:

>750_bases
ATGAACAAGTCTGATATTCTGAACTACAAGGATTATCGCGCCTTTCTGGCGGACTATAACAGCTGGCGCAGTGAAAACCG
CGCAGGCTGGAGTCTGTCCGTGTGGACTCGTCATCTGGGTCTTTCCTATCCGTCCGCTCTGTCGATGATTCTGAATCGCA
AGCGCCATATCGGCGACAAGCTGCTGGAAACCATGTGCCAGTACTTTGAGTTCACCGAGCTTGAAAAGAATCACTTCGCC
AATCTGGTAAAGTACGAAAAATCCATCGAAAGCAGCACACTTCGTATCATGGTCCTGAATCATCTCGACGGGGATAAGAA
AAACTCTCTCGCCCGCTATATCGTGCGCGAAGGTCTTCGTATGCCTCGCTTTGAGGACGCCGAAAGTCTGGCCGAGTTGC
TGGGGCCGATTCTGGGGATGAAGACTTCGGAGGTTCTGGCTTTGGAGCCCGGTGTTCCGGAAAAGCCCGATCCCAAGTCT
ATGCACCAGGAAGTTCTGGGTCTGCTGGAACGATCCTTTGATTTGGTTCCCAAAGAGTCCCGCCAGTATTCGACCAACTT
CATCCGCATGGAACGTTCGCGCCTGCCAGAGGCTATTGCACGCCTGCGGGCCTTCCAGCGCGAGTTCATCGCAGAGTTTG
ACTCGGAGGCGGGGGAGTCCCTGGTGTGCTTCCAGAACGCCGTTTTTGCAATGCTGAAAGAGTCTGCTCCGGGCGAAGAG
ACTTTGCCTTCTTCCAAGAAACTGACCTGA

Upstream 100 bases:

>100_bases
CCCAGACAAGCCGTGCTCCATGAAAACCTTTCACTGCCCTTGTGAACGTTCACTAAACCTGTGAACGGTTGGTGGGACCT
TGAGGTATAAGGGTCCCACG

Downstream 100 bases:

>100_bases
TCGTTCCGCGAATTTCCGCCTATATTGCGCTTTTCAGAGCTGCGGCATCTATTGAGCCGGGCATCTATTGTTCGTATAGT
TTTTGGCGTGAATAGAGAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 249; Mature: 249

Protein sequence:

>249_residues
MNKSDILNYKDYRAFLADYNSWRSENRAGWSLSVWTRHLGLSYPSALSMILNRKRHIGDKLLETMCQYFEFTELEKNHFA
NLVKYEKSIESSTLRIMVLNHLDGDKKNSLARYIVREGLRMPRFEDAESLAELLGPILGMKTSEVLALEPGVPEKPDPKS
MHQEVLGLLERSFDLVPKESRQYSTNFIRMERSRLPEAIARLRAFQREFIAEFDSEAGESLVCFQNAVFAMLKESAPGEE
TLPSSKKLT

Sequences:

>Translated_249_residues
MNKSDILNYKDYRAFLADYNSWRSENRAGWSLSVWTRHLGLSYPSALSMILNRKRHIGDKLLETMCQYFEFTELEKNHFA
NLVKYEKSIESSTLRIMVLNHLDGDKKNSLARYIVREGLRMPRFEDAESLAELLGPILGMKTSEVLALEPGVPEKPDPKS
MHQEVLGLLERSFDLVPKESRQYSTNFIRMERSRLPEAIARLRAFQREFIAEFDSEAGESLVCFQNAVFAMLKESAPGEE
TLPSSKKLT
>Mature_249_residues
MNKSDILNYKDYRAFLADYNSWRSENRAGWSLSVWTRHLGLSYPSALSMILNRKRHIGDKLLETMCQYFEFTELEKNHFA
NLVKYEKSIESSTLRIMVLNHLDGDKKNSLARYIVREGLRMPRFEDAESLAELLGPILGMKTSEVLALEPGVPEKPDPKS
MHQEVLGLLERSFDLVPKESRQYSTNFIRMERSRLPEAIARLRAFQREFIAEFDSEAGESLVCFQNAVFAMLKESAPGEE
TLPSSKKLT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28690; Mature: 28690

Theoretical pI: Translated: 7.06; Mature: 7.06

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKSDILNYKDYRAFLADYNSWRSENRAGWSLSVWTRHLGLSYPSALSMILNRKRHIGDK
CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
LLETMCQYFEFTELEKNHFANLVKYEKSIESSTLRIMVLNHLDGDKKNSLARYIVREGLR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHCCC
MPRFEDAESLAELLGPILGMKTSEVLALEPGVPEKPDPKSMHQEVLGLLERSFDLVPKES
CCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCH
RQYSTNFIRMERSRLPEAIARLRAFQREFIAEFDSEAGESLVCFQNAVFAMLKESAPGEE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHCCCCCC
TLPSSKKLT
CCCCCCCCC
>Mature Secondary Structure
MNKSDILNYKDYRAFLADYNSWRSENRAGWSLSVWTRHLGLSYPSALSMILNRKRHIGDK
CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH
LLETMCQYFEFTELEKNHFANLVKYEKSIESSTLRIMVLNHLDGDKKNSLARYIVREGLR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHCCC
MPRFEDAESLAELLGPILGMKTSEVLALEPGVPEKPDPKSMHQEVLGLLERSFDLVPKES
CCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCH
RQYSTNFIRMERSRLPEAIARLRAFQREFIAEFDSEAGESLVCFQNAVFAMLKESAPGEE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHCCCCCC
TLPSSKKLT
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA