| Definition | Bdellovibrio bacteriovorus HD100, complete genome. |
|---|---|
| Accession | NC_005363 |
| Length | 3,782,950 |
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The map label for this gene is 42523384
Identifier: 42523384
GI number: 42523384
Start: 1824364
End: 1825113
Strand: Direct
Name: 42523384
Synonym: Bd1905
Alternate gene names: NA
Gene position: 1824364-1825113 (Clockwise)
Preceding gene: 42523381
Following gene: 42523385
Centisome position: 48.23
GC content: 53.47
Gene sequence:
>750_bases ATGAACAAGTCTGATATTCTGAACTACAAGGATTATCGCGCCTTTCTGGCGGACTATAACAGCTGGCGCAGTGAAAACCG CGCAGGCTGGAGTCTGTCCGTGTGGACTCGTCATCTGGGTCTTTCCTATCCGTCCGCTCTGTCGATGATTCTGAATCGCA AGCGCCATATCGGCGACAAGCTGCTGGAAACCATGTGCCAGTACTTTGAGTTCACCGAGCTTGAAAAGAATCACTTCGCC AATCTGGTAAAGTACGAAAAATCCATCGAAAGCAGCACACTTCGTATCATGGTCCTGAATCATCTCGACGGGGATAAGAA AAACTCTCTCGCCCGCTATATCGTGCGCGAAGGTCTTCGTATGCCTCGCTTTGAGGACGCCGAAAGTCTGGCCGAGTTGC TGGGGCCGATTCTGGGGATGAAGACTTCGGAGGTTCTGGCTTTGGAGCCCGGTGTTCCGGAAAAGCCCGATCCCAAGTCT ATGCACCAGGAAGTTCTGGGTCTGCTGGAACGATCCTTTGATTTGGTTCCCAAAGAGTCCCGCCAGTATTCGACCAACTT CATCCGCATGGAACGTTCGCGCCTGCCAGAGGCTATTGCACGCCTGCGGGCCTTCCAGCGCGAGTTCATCGCAGAGTTTG ACTCGGAGGCGGGGGAGTCCCTGGTGTGCTTCCAGAACGCCGTTTTTGCAATGCTGAAAGAGTCTGCTCCGGGCGAAGAG ACTTTGCCTTCTTCCAAGAAACTGACCTGA
Upstream 100 bases:
>100_bases CCCAGACAAGCCGTGCTCCATGAAAACCTTTCACTGCCCTTGTGAACGTTCACTAAACCTGTGAACGGTTGGTGGGACCT TGAGGTATAAGGGTCCCACG
Downstream 100 bases:
>100_bases TCGTTCCGCGAATTTCCGCCTATATTGCGCTTTTCAGAGCTGCGGCATCTATTGAGCCGGGCATCTATTGTTCGTATAGT TTTTGGCGTGAATAGAGAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 249; Mature: 249
Protein sequence:
>249_residues MNKSDILNYKDYRAFLADYNSWRSENRAGWSLSVWTRHLGLSYPSALSMILNRKRHIGDKLLETMCQYFEFTELEKNHFA NLVKYEKSIESSTLRIMVLNHLDGDKKNSLARYIVREGLRMPRFEDAESLAELLGPILGMKTSEVLALEPGVPEKPDPKS MHQEVLGLLERSFDLVPKESRQYSTNFIRMERSRLPEAIARLRAFQREFIAEFDSEAGESLVCFQNAVFAMLKESAPGEE TLPSSKKLT
Sequences:
>Translated_249_residues MNKSDILNYKDYRAFLADYNSWRSENRAGWSLSVWTRHLGLSYPSALSMILNRKRHIGDKLLETMCQYFEFTELEKNHFA NLVKYEKSIESSTLRIMVLNHLDGDKKNSLARYIVREGLRMPRFEDAESLAELLGPILGMKTSEVLALEPGVPEKPDPKS MHQEVLGLLERSFDLVPKESRQYSTNFIRMERSRLPEAIARLRAFQREFIAEFDSEAGESLVCFQNAVFAMLKESAPGEE TLPSSKKLT >Mature_249_residues MNKSDILNYKDYRAFLADYNSWRSENRAGWSLSVWTRHLGLSYPSALSMILNRKRHIGDKLLETMCQYFEFTELEKNHFA NLVKYEKSIESSTLRIMVLNHLDGDKKNSLARYIVREGLRMPRFEDAESLAELLGPILGMKTSEVLALEPGVPEKPDPKS MHQEVLGLLERSFDLVPKESRQYSTNFIRMERSRLPEAIARLRAFQREFIAEFDSEAGESLVCFQNAVFAMLKESAPGEE TLPSSKKLT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28690; Mature: 28690
Theoretical pI: Translated: 7.06; Mature: 7.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.6 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKSDILNYKDYRAFLADYNSWRSENRAGWSLSVWTRHLGLSYPSALSMILNRKRHIGDK CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH LLETMCQYFEFTELEKNHFANLVKYEKSIESSTLRIMVLNHLDGDKKNSLARYIVREGLR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHCCC MPRFEDAESLAELLGPILGMKTSEVLALEPGVPEKPDPKSMHQEVLGLLERSFDLVPKES CCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCH RQYSTNFIRMERSRLPEAIARLRAFQREFIAEFDSEAGESLVCFQNAVFAMLKESAPGEE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHCCCCCC TLPSSKKLT CCCCCCCCC >Mature Secondary Structure MNKSDILNYKDYRAFLADYNSWRSENRAGWSLSVWTRHLGLSYPSALSMILNRKRHIGDK CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH LLETMCQYFEFTELEKNHFANLVKYEKSIESSTLRIMVLNHLDGDKKNSLARYIVREGLR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHHHHHHHHCCC MPRFEDAESLAELLGPILGMKTSEVLALEPGVPEKPDPKSMHQEVLGLLERSFDLVPKES CCCCCCHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCH RQYSTNFIRMERSRLPEAIARLRAFQREFIAEFDSEAGESLVCFQNAVFAMLKESAPGEE HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHCCCCCC TLPSSKKLT CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA