Click here to switch to the map view.

The map label for this gene is 42523212

Identifier: 42523212

GI number: 42523212

Start: 1653727

End: 1654266

Strand: Direct

Name: 42523212

Synonym: Bd1716

Alternate gene names: NA

Gene position: 1653727-1654266 (Clockwise)

Preceding gene: 42523211

Following gene: 42523214

Centisome position: 43.72

GC content: 49.26

Gene sequence:

>540_bases
ATGCGTAAACCACAACTTGCACTTTACGGAACACTCTTGGCTTTACTGCTTTCTTCCTGCGGCGGCATCGAATCGATGAT
TGGTCCGTCCGAAATTCTTTACGAAATTCCTTCTGAAATGTTTTATCAGACCAAGGGTGACTGCACCCAAGGTGATCTGT
CTTTCAGTATTCTGGTGGCGGCAGGCACGCAAATGTGGACGGATCCCGCAGCCGTACTGCATTCGCAGCAAGAGCTTTAT
CTGCACTCCAATCAAACCTTTGATATGCGCTATCGTGAATTCACTTTGGATGATGTGGCCTTTGATACAAGGTTGCAATC
GCGTTTCAGTATCGATGGCCACAGTGGGCGCGTGAAGCTCAACGGAGTCGGTGAAGGTTTTGTGATTCAGGACAACGGAC
GCCGCTATTTGCAATTGCAGTTCACTCAAGCCCTGAACTCGCCAGAGCTGGTTGGTAAAACGGCGCGCTTTCGTTTGATG
AATTCAATGAACGGACTCGACACGGACCGTGCCGAGTATTGTGGATACACGCTGTATTAG

Upstream 100 bases:

>100_bases
GCTAACACTTGTGGGGTTTTCTTTTTTTTGTCCACAGGACCTCGGGCCATTCTGACACCAAACTTGTGACAAGTCTGTTT
GGCAGGTCGTATAAACAAGT

Downstream 100 bases:

>100_bases
GACTTCGCTGCCAGAACCCAGATACCGACCAGAATAAACAAACTGCCGGAAACGTACTTCATGACTTGGGGGCTTAACAT
GGTCCCCAGGAATTTTCCAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 179; Mature: 179

Protein sequence:

>179_residues
MRKPQLALYGTLLALLLSSCGGIESMIGPSEILYEIPSEMFYQTKGDCTQGDLSFSILVAAGTQMWTDPAAVLHSQQELY
LHSNQTFDMRYREFTLDDVAFDTRLQSRFSIDGHSGRVKLNGVGEGFVIQDNGRRYLQLQFTQALNSPELVGKTARFRLM
NSMNGLDTDRAEYCGYTLY

Sequences:

>Translated_179_residues
MRKPQLALYGTLLALLLSSCGGIESMIGPSEILYEIPSEMFYQTKGDCTQGDLSFSILVAAGTQMWTDPAAVLHSQQELY
LHSNQTFDMRYREFTLDDVAFDTRLQSRFSIDGHSGRVKLNGVGEGFVIQDNGRRYLQLQFTQALNSPELVGKTARFRLM
NSMNGLDTDRAEYCGYTLY
>Mature_179_residues
MRKPQLALYGTLLALLLSSCGGIESMIGPSEILYEIPSEMFYQTKGDCTQGDLSFSILVAAGTQMWTDPAAVLHSQQELY
LHSNQTFDMRYREFTLDDVAFDTRLQSRFSIDGHSGRVKLNGVGEGFVIQDNGRRYLQLQFTQALNSPELVGKTARFRLM
NSMNGLDTDRAEYCGYTLY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20148; Mature: 20148

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKPQLALYGTLLALLLSSCGGIESMIGPSEILYEIPSEMFYQTKGDCTQGDLSFSILVA
CCCCHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHCCHHHHCCCCCCCCCCCCEEEEEEE
AGTQMWTDPAAVLHSQQELYLHSNQTFDMRYREFTLDDVAFDTRLQSRFSIDGHSGRVKL
ECCCCCCCHHHHHCCCCCEEEECCCEEEEEEEEEEHHHHHHHHHHHHHEEECCCCCEEEE
NGVGEGFVIQDNGRRYLQLQFTQALNSPELVGKTARFRLMNSMNGLDTDRAEYCGYTLY
EECCCEEEEECCCCEEEEEEEHHHCCCHHHHCHHHHHHHHHHCCCCCCCCHHHCCCCCC
>Mature Secondary Structure
MRKPQLALYGTLLALLLSSCGGIESMIGPSEILYEIPSEMFYQTKGDCTQGDLSFSILVA
CCCCHHHHHHHHHHHHHHCCCCHHHHCCHHHHHHHCCHHHHCCCCCCCCCCCCEEEEEEE
AGTQMWTDPAAVLHSQQELYLHSNQTFDMRYREFTLDDVAFDTRLQSRFSIDGHSGRVKL
ECCCCCCCHHHHHCCCCCEEEECCCEEEEEEEEEEHHHHHHHHHHHHHEEECCCCCEEEE
NGVGEGFVIQDNGRRYLQLQFTQALNSPELVGKTARFRLMNSMNGLDTDRAEYCGYTLY
EECCCEEEEECCCCEEEEEEEHHHCCCHHHHCHHHHHHHHHHCCCCCCCCHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA