| Definition | Bdellovibrio bacteriovorus HD100, complete genome. |
|---|---|
| Accession | NC_005363 |
| Length | 3,782,950 |
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The map label for this gene is hppA [H]
Identifier: 42523211
GI number: 42523211
Start: 1651395
End: 1653461
Strand: Direct
Name: hppA [H]
Synonym: Bd1715
Alternate gene names: 42523211
Gene position: 1651395-1653461 (Clockwise)
Preceding gene: 42523207
Following gene: 42523212
Centisome position: 43.65
GC content: 52.1
Gene sequence:
>2067_bases ATGTTTAGTGAATCTTTGCTGATCTCTCCTGCAATTGCAGGGGTCGTTGGTTTGATCGTTGCTTTGGCTCTGTACCTTCG CGTGAAGGCACAACCAGCGGGCAATGAGACAATGAATCGTATCGCGTCCTACGTGCGCGAAGGTTCTATGGCGTTCCTTG TGCGTGAGTACAAGGTCCTTTTCGTCTACGCAATCGTCGTAGGCTTGGCTCTTTGGTTCGCCTTGGGCGGTATCGCAGCA GGATCCTTCATCCTGGGTGCGTTCCTGTCTTTGCTTGCGGGCTTCTTCGGTATGAAGGCGGCAACTTATGCCAACGTTCG TACCTCTCAAGCCGCAGCTGGCGGTTCTAAAGCGGCGGCATTGCTGGTTGCTTTGGACGGCGGCGCTGTAATGGGTCTTT CCGTTGCAGGTCTTGGTTTGATCGGTCTTGGTGGTTTGTATGTTGCCTTCCAGGGTGATGCTCACCTGGGCACAATCCTT CACTCCTTCGCAGTGGGTGCTTCCTCTATCGCTCTATTTGCGCGTATCGGTGGTGGTATCTACACTAAAGCGGCGGACGT GGGTGCCGACATCGCTGGTAAAGTTGTAGAAAACATCCCTGAAGACGACCCTCGTAACCCTGGTGTAATCGCCGACAACG TTGGTGACAACGTGGGTGACGTTGCTGGTATGGGCGCAGACATCTATGAGTCCATGGTTGCTGCGATCGTTTCTGCTATG GCGATTGCTTTGACAATCCCTGCAGAAGGTCTTTCTGCTTTGATGACGGGTGCGGATGCTGAGACGGTGCGTGTTGCCGG TGTTGCATTGCCAATCCTGTTGTCCACTTTGGGTCTGGTGATCTCTATCATCGTTATCTTTGCTGCTCGCGCGTTCAAAA ACGGCAAGCCTGCAACTGTATTGCGTAATGCTTTGATCTTCCCTCCAATTCTTTTGACTATCGCTGCTTACATCATTCTT CCGATGTTCGGCATCAATCAGAGTGTGACTGTGGCTTTGGCTGCGGGTGCGTTCGGTGGTGCTTTGATCGGTTTGATCAC TGAGTACTACACAGCGGCTCGTCCCATCCGTCTGGTTGCTGAAGCGGCTTTGACTGGTGCGGGCACTGGTGTGATCCGTG GTTTGGCAGTGGGTATGGAATCCACAGCGATCCCAATGTTGATCGTTGTTATCGCAGCTTACGTGGCTGACCAGGCTTTG GGTCTGTACGGTATCGCAATGGCGGCAGTGGGTATGTTGGCTGGTACTGCAGTTGTAATGACTGTAGATGCTTACGGTCC AATCGCTGACAACGCGGGTGGTATCTCTGAAATGTCCGGTCTGGGCAAAGACGTTCGTGCGATCACTGACGAATTGGATG CGGTTGGTAATACAACGGCAGCTATCGGTAAAGGTTTCGCGATCGGTTCTGCGATCCTGACAGTTGTGGCATTGTTCTCT GCATTCAACATGGAAGTAAACCACGTTCGTGAGGGCGCGGGTCTTGCTAAAATGTCTTTGGATCTGACTTCTTCCGGCGT TCTGATCGGTATCTTGTTGGGCTCTATCCTTCCATTCCTGGTGGGTGCGACAACAATGACTGCGGTTGGTAAAGCGGCTC AGAAAATCGTTCAAGAGATCGCTCGTCAATTCAAAGAAATCCCAGGTCTTCGTGAAGGTAAAGCGGAACCACAACCAGCT AAGATCGTGGACATTGCAACTCAGGCTGCATTGTTCGAAATGATCCTGCCAGGTATGATCGCGATCCTTGCTCCAGTGGC AGTTGGTTTCTTGTTGGGGCCTCAGGCTTTGGCAGGTCTACTTGCTGGTGGTTTGGCTGTCGGTGCAACTATGTCCCTGT TCATGGCGAACGCGGGTGGTGCATGGGATAACGCTAAGAAATACATCGAAAAAGGCGGCCTTCCAGGTCATCCAAAAGGT TCCGATGCTCACAAAGCAGCGGTTGTTGGTGACACTGTCGGTGACCCGTTCAAAGACACTTCCGGTCCTGGCGTTGCGAT CCTTATCAAAGTTATGTCCGTCGTATCTTTGTTGATCGCTCAATTGATCGCTACTATCGGCGGCTAA
Upstream 100 bases:
>100_bases TTCAGCTGCTACGGCCCCCTCCCAGATTGACTCGATGTAATGAGACGCGGTAACTCTAAGCCTTCGTAATTAAAACGAGA AATCATAAACGGAGTGCAAC
Downstream 100 bases:
>100_bases GGCGCGGCAGCGCAGGAGGCCGTAGGGCCGCTACTCCGGCACTGCCGGAGTGTAAGCGGTCGCGAAGGCTGGACTTCGGC TCTGCCGAGGAGGCGTAGCT
Product: membrane-bound proton-translocating pyrophosphatase
Products: NA
Alternate protein names: Membrane-bound sodium-translocating pyrophosphatase; Pyrophosphate-energized inorganic pyrophosphatase; Na(+)-PPase [H]
Number of amino acids: Translated: 688; Mature: 688
Protein sequence:
>688_residues MFSESLLISPAIAGVVGLIVALALYLRVKAQPAGNETMNRIASYVREGSMAFLVREYKVLFVYAIVVGLALWFALGGIAA GSFILGAFLSLLAGFFGMKAATYANVRTSQAAAGGSKAAALLVALDGGAVMGLSVAGLGLIGLGGLYVAFQGDAHLGTIL HSFAVGASSIALFARIGGGIYTKAADVGADIAGKVVENIPEDDPRNPGVIADNVGDNVGDVAGMGADIYESMVAAIVSAM AIALTIPAEGLSALMTGADAETVRVAGVALPILLSTLGLVISIIVIFAARAFKNGKPATVLRNALIFPPILLTIAAYIIL PMFGINQSVTVALAAGAFGGALIGLITEYYTAARPIRLVAEAALTGAGTGVIRGLAVGMESTAIPMLIVVIAAYVADQAL GLYGIAMAAVGMLAGTAVVMTVDAYGPIADNAGGISEMSGLGKDVRAITDELDAVGNTTAAIGKGFAIGSAILTVVALFS AFNMEVNHVREGAGLAKMSLDLTSSGVLIGILLGSILPFLVGATTMTAVGKAAQKIVQEIARQFKEIPGLREGKAEPQPA KIVDIATQAALFEMILPGMIAILAPVAVGFLLGPQALAGLLAGGLAVGATMSLFMANAGGAWDNAKKYIEKGGLPGHPKG SDAHKAAVVGDTVGDPFKDTSGPGVAILIKVMSVVSLLIAQLIATIGG
Sequences:
>Translated_688_residues MFSESLLISPAIAGVVGLIVALALYLRVKAQPAGNETMNRIASYVREGSMAFLVREYKVLFVYAIVVGLALWFALGGIAA GSFILGAFLSLLAGFFGMKAATYANVRTSQAAAGGSKAAALLVALDGGAVMGLSVAGLGLIGLGGLYVAFQGDAHLGTIL HSFAVGASSIALFARIGGGIYTKAADVGADIAGKVVENIPEDDPRNPGVIADNVGDNVGDVAGMGADIYESMVAAIVSAM AIALTIPAEGLSALMTGADAETVRVAGVALPILLSTLGLVISIIVIFAARAFKNGKPATVLRNALIFPPILLTIAAYIIL PMFGINQSVTVALAAGAFGGALIGLITEYYTAARPIRLVAEAALTGAGTGVIRGLAVGMESTAIPMLIVVIAAYVADQAL GLYGIAMAAVGMLAGTAVVMTVDAYGPIADNAGGISEMSGLGKDVRAITDELDAVGNTTAAIGKGFAIGSAILTVVALFS AFNMEVNHVREGAGLAKMSLDLTSSGVLIGILLGSILPFLVGATTMTAVGKAAQKIVQEIARQFKEIPGLREGKAEPQPA KIVDIATQAALFEMILPGMIAILAPVAVGFLLGPQALAGLLAGGLAVGATMSLFMANAGGAWDNAKKYIEKGGLPGHPKG SDAHKAAVVGDTVGDPFKDTSGPGVAILIKVMSVVSLLIAQLIATIGG >Mature_688_residues MFSESLLISPAIAGVVGLIVALALYLRVKAQPAGNETMNRIASYVREGSMAFLVREYKVLFVYAIVVGLALWFALGGIAA GSFILGAFLSLLAGFFGMKAATYANVRTSQAAAGGSKAAALLVALDGGAVMGLSVAGLGLIGLGGLYVAFQGDAHLGTIL HSFAVGASSIALFARIGGGIYTKAADVGADIAGKVVENIPEDDPRNPGVIADNVGDNVGDVAGMGADIYESMVAAIVSAM AIALTIPAEGLSALMTGADAETVRVAGVALPILLSTLGLVISIIVIFAARAFKNGKPATVLRNALIFPPILLTIAAYIIL PMFGINQSVTVALAAGAFGGALIGLITEYYTAARPIRLVAEAALTGAGTGVIRGLAVGMESTAIPMLIVVIAAYVADQAL GLYGIAMAAVGMLAGTAVVMTVDAYGPIADNAGGISEMSGLGKDVRAITDELDAVGNTTAAIGKGFAIGSAILTVVALFS AFNMEVNHVREGAGLAKMSLDLTSSGVLIGILLGSILPFLVGATTMTAVGKAAQKIVQEIARQFKEIPGLREGKAEPQPA KIVDIATQAALFEMILPGMIAILAPVAVGFLLGPQALAGLLAGGLAVGATMSLFMANAGGAWDNAKKYIEKGGLPGHPKG SDAHKAAVVGDTVGDPFKDTSGPGVAILIKVMSVVSLLIAQLIATIGG
Specific function: Sodium pump that utilizes the energy of pyrophosphate hydrolysis as the driving force for Na(+) movement across the membrane [H]
COG id: COG3808
COG function: function code C; Inorganic pyrophosphatase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the H(+)-translocating pyrophosphatase (TC 3.A.10) family. K(+)-stimulated subfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004131 [H]
Pfam domain/function: PF03030 H_PPase [H]
EC number: =3.6.1.1 [H]
Molecular weight: Translated: 69154; Mature: 69154
Theoretical pI: Translated: 5.50; Mature: 5.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFSESLLISPAIAGVVGLIVALALYLRVKAQPAGNETMNRIASYVREGSMAFLVREYKVL CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHH FVYAIVVGLALWFALGGIAAGSFILGAFLSLLAGFFGMKAATYANVRTSQAAAGGSKAAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCEE LLVALDGGAVMGLSVAGLGLIGLGGLYVAFQGDAHLGTILHSFAVGASSIALFARIGGGI EEEEECCCCEEHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHCHHHHHHHHHHCCCC YTKAADVGADIAGKVVENIPEDDPRNPGVIADNVGDNVGDVAGMGADIYESMVAAIVSAM EEHHHHCCHHHHHHHHHCCCCCCCCCCCEEECCCCCCHHHHHCCCHHHHHHHHHHHHHHH AIALTIPAEGLSALMTGADAETVRVAGVALPILLSTLGLVISIIVIFAARAFKNGKPATV HHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH LRNALIFPPILLTIAAYIILPMFGINQSVTVALAAGAFGGALIGLITEYYTAARPIRLVA HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCHHHHHH EAALTGAGTGVIRGLAVGMESTAIPMLIVVIAAYVADQALGLYGIAMAAVGMLAGTAVVM HHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEE TVDAYGPIADNAGGISEMSGLGKDVRAITDELDAVGNTTAAIGKGFAIGSAILTVVALFS EEECCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHH AFNMEVNHVREGAGLAKMSLDLTSSGVLIGILLGSILPFLVGATTMTAVGKAAQKIVQEI HHCCHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ARQFKEIPGLREGKAEPQPAKIVDIATQAALFEMILPGMIAILAPVAVGFLLGPQALAGL HHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH LAGGLAVGATMSLFMANAGGAWDNAKKYIEKGGLPGHPKGSDAHKAAVVGDTVGDPFKDT HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCCCCC SGPGVAILIKVMSVVSLLIAQLIATIGG CCCHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MFSESLLISPAIAGVVGLIVALALYLRVKAQPAGNETMNRIASYVREGSMAFLVREYKVL CCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHH FVYAIVVGLALWFALGGIAAGSFILGAFLSLLAGFFGMKAATYANVRTSQAAAGGSKAAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCEE LLVALDGGAVMGLSVAGLGLIGLGGLYVAFQGDAHLGTILHSFAVGASSIALFARIGGGI EEEEECCCCEEHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHCHHHHHHHHHHCCCC YTKAADVGADIAGKVVENIPEDDPRNPGVIADNVGDNVGDVAGMGADIYESMVAAIVSAM EEHHHHCCHHHHHHHHHCCCCCCCCCCCEEECCCCCCHHHHHCCCHHHHHHHHHHHHHHH AIALTIPAEGLSALMTGADAETVRVAGVALPILLSTLGLVISIIVIFAARAFKNGKPATV HHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH LRNALIFPPILLTIAAYIILPMFGINQSVTVALAAGAFGGALIGLITEYYTAARPIRLVA HHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHCCHHHHHH EAALTGAGTGVIRGLAVGMESTAIPMLIVVIAAYVADQALGLYGIAMAAVGMLAGTAVVM HHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEE TVDAYGPIADNAGGISEMSGLGKDVRAITDELDAVGNTTAAIGKGFAIGSAILTVVALFS EEECCCCCCCCCCCHHHHHHCCHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHHHHH AFNMEVNHVREGAGLAKMSLDLTSSGVLIGILLGSILPFLVGATTMTAVGKAAQKIVQEI HHCCHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ARQFKEIPGLREGKAEPQPAKIVDIATQAALFEMILPGMIAILAPVAVGFLLGPQALAGL HHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH LAGGLAVGATMSLFMANAGGAWDNAKKYIEKGGLPGHPKGSDAHKAAVVGDTVGDPFKDT HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCCCCC SGPGVAILIKVMSVVSLLIAQLIATIGG CCCHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 12552129 [H]