Definition Bdellovibrio bacteriovorus HD100, complete genome.
Accession NC_005363
Length 3,782,950

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The map label for this gene is 42523131

Identifier: 42523131

GI number: 42523131

Start: 1565355

End: 1566254

Strand: Direct

Name: 42523131

Synonym: Bd1628

Alternate gene names: NA

Gene position: 1565355-1566254 (Clockwise)

Preceding gene: 42523130

Following gene: 42523132

Centisome position: 41.38

GC content: 51.78

Gene sequence:

>900_bases
TTGTCGCTGGTCTTCTCCGTTCCCGGAAAAACATTTATTGCTGGTGAATATCTGGCGCTGGCGGAAGGTCCGACACTGTT
CTTCCTTTCGCAGCCTTGCTTTGAAACGGAAATCTCCCGTGGCAAAGGCGATGTTCTGGGCATTCATCCGGAAAGCCCTG
CCGGGGTTTTCATGAGCAAACACCGGGGTTATTTCAGAAATTTCGATATCACTTTCCGTGATGCTTATTCCGGCAAAGGC
GGCTTTGGGGCCTCGACGGCTCAGTTCCTTTCCGTCTATGCGATGTGGCTTTATAAAGAAGCCCACCAAATGGACATGGA
AAAGTATCTCGACTTCAAACACATGCTTGAAGTGTACTATCACGTGGCCTGGAACGGGCAGGGTCAGCGACCCAGTGGCG
CGGATCTGGTAGCACAATTGAAGGGGTCGATGACCTTCTTTGAGAAGCGCAGTGGGATGATCTCTGTGACCAACTGGCCG
TTTGAGGATCTGGAATTGTTGCTGGTTCATACCGGCAACAAGCTTGCGACCCACGAACATCTGCGCACGCTGCCGGTGTT
CCCGACCGCAGGGCTTGAAAGCGCCATGCTGACGATCCGTGAAGCTTTCGACAAAATCGACAGCGCTCGCTTTGTCGAAG
GTGTCAAAGCCTATGCCCAAGAACTGTTAAAACTGAATTTCACCTGTGAACCGACGCTAAAACTTTTGTCTGACATCCGT
CAAATTCCAGGAGTCAAAGCCGCCAAAGGTTGTGGCGCTTTGGGGGTGGATGTGATGGCGATTGTGACGGCCAAAGGTGA
AACTGCAGGTGTTAAAGCCTACTGTGAAAGCAAGGGCCTGTCCGTGCTTTCTTCCTCTGATAAAATCTCGTCCGGACTTC
AGGTCCGAGGTAGCCTATGA

Upstream 100 bases:

>100_bases
GCGTATATCCCTGAGCAATGCCATCGACGTTCTGAAAGAACTTCGTGCGGCTCAGAAAACCCCAGCCTCCACGACTCAAC
ATCATTCCTAGGAGCGGACC

Downstream 100 bases:

>100_bases
AACAAGTGACTGTATCTGCTCCATCCAATATCGCCCTTATCAAGTACATGGGTAAAATTGAGGGCTCTGGCAATAAACCG
ACCAACGGTTCGTTGTCCTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 299; Mature: 298

Protein sequence:

>299_residues
MSLVFSVPGKTFIAGEYLALAEGPTLFFLSQPCFETEISRGKGDVLGIHPESPAGVFMSKHRGYFRNFDITFRDAYSGKG
GFGASTAQFLSVYAMWLYKEAHQMDMEKYLDFKHMLEVYYHVAWNGQGQRPSGADLVAQLKGSMTFFEKRSGMISVTNWP
FEDLELLLVHTGNKLATHEHLRTLPVFPTAGLESAMLTIREAFDKIDSARFVEGVKAYAQELLKLNFTCEPTLKLLSDIR
QIPGVKAAKGCGALGVDVMAIVTAKGETAGVKAYCESKGLSVLSSSDKISSGLQVRGSL

Sequences:

>Translated_299_residues
MSLVFSVPGKTFIAGEYLALAEGPTLFFLSQPCFETEISRGKGDVLGIHPESPAGVFMSKHRGYFRNFDITFRDAYSGKG
GFGASTAQFLSVYAMWLYKEAHQMDMEKYLDFKHMLEVYYHVAWNGQGQRPSGADLVAQLKGSMTFFEKRSGMISVTNWP
FEDLELLLVHTGNKLATHEHLRTLPVFPTAGLESAMLTIREAFDKIDSARFVEGVKAYAQELLKLNFTCEPTLKLLSDIR
QIPGVKAAKGCGALGVDVMAIVTAKGETAGVKAYCESKGLSVLSSSDKISSGLQVRGSL
>Mature_298_residues
SLVFSVPGKTFIAGEYLALAEGPTLFFLSQPCFETEISRGKGDVLGIHPESPAGVFMSKHRGYFRNFDITFRDAYSGKGG
FGASTAQFLSVYAMWLYKEAHQMDMEKYLDFKHMLEVYYHVAWNGQGQRPSGADLVAQLKGSMTFFEKRSGMISVTNWPF
EDLELLLVHTGNKLATHEHLRTLPVFPTAGLESAMLTIREAFDKIDSARFVEGVKAYAQELLKLNFTCEPTLKLLSDIRQ
IPGVKAAKGCGALGVDVMAIVTAKGETAGVKAYCESKGLSVLSSSDKISSGLQVRGSL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32793; Mature: 32662

Theoretical pI: Translated: 7.61; Mature: 7.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLVFSVPGKTFIAGEYLALAEGPTLFFLSQPCFETEISRGKGDVLGIHPESPAGVFMSK
CCEEEECCCCEEECCCEEEEECCCEEEEECCCCHHHHHCCCCCCEEEECCCCCCCHHHHH
HRGYFRNFDITFRDAYSGKGGFGASTAQFLSVYAMWLYKEAHQMDMEKYLDFKHMLEVYY
CCCCEECCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHE
HVAWNGQGQRPSGADLVAQLKGSMTFFEKRSGMISVTNWPFEDLELLLVHTGNKLATHEH
EEEECCCCCCCCCHHHHHHHHCCHHHHHHCCCEEEEECCCHHHEEEEEEECCCCHHHHHH
LRTLPVFPTAGLESAMLTIREAFDKIDSARFVEGVKAYAQELLKLNFTCEPTLKLLSDIR
HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
QIPGVKAAKGCGALGVDVMAIVTAKGETAGVKAYCESKGLSVLSSSDKISSGLQVRGSL
HCCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHCCCCEEEECCCHHCCCCEEECCC
>Mature Secondary Structure 
SLVFSVPGKTFIAGEYLALAEGPTLFFLSQPCFETEISRGKGDVLGIHPESPAGVFMSK
CEEEECCCCEEECCCEEEEECCCEEEEECCCCHHHHHCCCCCCEEEECCCCCCCHHHHH
HRGYFRNFDITFRDAYSGKGGFGASTAQFLSVYAMWLYKEAHQMDMEKYLDFKHMLEVYY
CCCCEECCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHE
HVAWNGQGQRPSGADLVAQLKGSMTFFEKRSGMISVTNWPFEDLELLLVHTGNKLATHEH
EEEECCCCCCCCCHHHHHHHHCCHHHHHHCCCEEEEECCCHHHEEEEEEECCCCHHHHHH
LRTLPVFPTAGLESAMLTIREAFDKIDSARFVEGVKAYAQELLKLNFTCEPTLKLLSDIR
HHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHH
QIPGVKAAKGCGALGVDVMAIVTAKGETAGVKAYCESKGLSVLSSSDKISSGLQVRGSL
HCCCCCCCCCCCCCCCEEEEEEEECCCCCCHHHHHHCCCCEEEECCCHHCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA