| Definition | Bdellovibrio bacteriovorus HD100, complete genome. |
|---|---|
| Accession | NC_005363 |
| Length | 3,782,950 |
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The map label for this gene is 42522909
Identifier: 42522909
GI number: 42522909
Start: 1316694
End: 1317545
Strand: Direct
Name: 42522909
Synonym: Bd1391
Alternate gene names: NA
Gene position: 1316694-1317545 (Clockwise)
Preceding gene: 42522907
Following gene: 42522911
Centisome position: 34.81
GC content: 51.41
Gene sequence:
>852_bases GTGTTGAATTCAAAGCTGTTGCTGTCGTCCTTGCTGCTTTTGACCCTTGTTGCCTGTACGAAAAATGAAAAAACAAACAA TGTCGAACTGACCGGTTCAGAGACCTCGATTATTGGCGGCGAAAAGGCTGATGCCAATAGTCCGGTGACGGCCTCCACGG TTTCTTTGATTTACAACTATCAGGGCAAGCCTTACTCCATCTGCACAGGCACTTTGATTTCAAAGAATCTGGTTTTGACG GCCGCTCATTGCCTGGCGGAGCTTCAGGGCGCAGAAATCTTCGTTCATCTGGGGGAGGTTTTGCCGACGGAAGTCGATGA AACCAAACTCTTGCGAATAGCGGAATTTGAAACTCACAAAGAATATCATCTGGTTTACAATGAACAGGGCTTCCCGGTGA CGGGCCGCAATGACGTGGCCCTGATCAAGTTATTACTGGATGCTCCGGAAGGTGCAGTGCCGGTGCCGGTTCTGGATGAG TCCGTAGAGCTGAAAGCAGGAGAGACCTTGCTGCTTGCGGGCTATGGACTGTTGAATGAAATTGATAATCCGATTCCGGC AACGGGCCTGAACTTGGTGCGAGTGCCGCTGGCAAAATTGTGGGAATCCATTTTGGTGACGGATCAAACGAATGCAAAAG GCGCTTGTTCGGGTGATTCCGGCGGCCCGGCTTACCTGGAAACTTCCAAAGGCCTTGTTGTTGTGGGCATCACTCGTGGG CCCCACGATCTGGCGCCGGACTGTCGTCATTTCGGTGAATACACCAATGCTTCCATGTTCAAAACATTCATCTTGGAAGA GGCGGCTGCCATGGGTGCTGACGCCCCTGTCTTTACGACCGAGCGTCAGTAA
Upstream 100 bases:
>100_bases ATACTGTCCAAGAATTTGACACAGATCAATTCCTAGGAGTTTTCGCAACTGTTTGATAGATTCCCCAGCGGCGATTCACG CCGTTGTAAGGGGAGTCCCT
Downstream 100 bases:
>100_bases ATTGTCCTAAAGATTCGTCTGCAGTGTCAAAAACACACTGCGGACTTCCCCCGGGTACAGATAGATGTGCCCGTATTGAG TCGGGGATTCCTTCCAGTAT
Product: putative trypsin
Products: NA
Alternate protein names: Serine Protease; Secreted Trypsin-Like Serine Protease; Trypsin-Like Serine Protease Family Protein; Phosphotrypsin; Protease
Number of amino acids: Translated: 283; Mature: 283
Protein sequence:
>283_residues MLNSKLLLSSLLLLTLVACTKNEKTNNVELTGSETSIIGGEKADANSPVTASTVSLIYNYQGKPYSICTGTLISKNLVLT AAHCLAELQGAEIFVHLGEVLPTEVDETKLLRIAEFETHKEYHLVYNEQGFPVTGRNDVALIKLLLDAPEGAVPVPVLDE SVELKAGETLLLAGYGLLNEIDNPIPATGLNLVRVPLAKLWESILVTDQTNAKGACSGDSGGPAYLETSKGLVVVGITRG PHDLAPDCRHFGEYTNASMFKTFILEEAAAMGADAPVFTTERQ
Sequences:
>Translated_283_residues MLNSKLLLSSLLLLTLVACTKNEKTNNVELTGSETSIIGGEKADANSPVTASTVSLIYNYQGKPYSICTGTLISKNLVLT AAHCLAELQGAEIFVHLGEVLPTEVDETKLLRIAEFETHKEYHLVYNEQGFPVTGRNDVALIKLLLDAPEGAVPVPVLDE SVELKAGETLLLAGYGLLNEIDNPIPATGLNLVRVPLAKLWESILVTDQTNAKGACSGDSGGPAYLETSKGLVVVGITRG PHDLAPDCRHFGEYTNASMFKTFILEEAAAMGADAPVFTTERQ >Mature_283_residues MLNSKLLLSSLLLLTLVACTKNEKTNNVELTGSETSIIGGEKADANSPVTASTVSLIYNYQGKPYSICTGTLISKNLVLT AAHCLAELQGAEIFVHLGEVLPTEVDETKLLRIAEFETHKEYHLVYNEQGFPVTGRNDVALIKLLLDAPEGAVPVPVLDE SVELKAGETLLLAGYGLLNEIDNPIPATGLNLVRVPLAKLWESILVTDQTNAKGACSGDSGGPAYLETSKGLVVVGITRG PHDLAPDCRHFGEYTNASMFKTFILEEAAAMGADAPVFTTERQ
Specific function: Unknown
COG id: COG5640
COG function: function code O; Secreted trypsin-like serine protease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI4503137, Length=214, Percent_Identity=30.3738317757009, Blast_Score=72, Evalue=5e-13, Organism=Drosophila melanogaster, GI21358103, Length=191, Percent_Identity=29.3193717277487, Blast_Score=69, Evalue=4e-12, Organism=Drosophila melanogaster, GI24658940, Length=190, Percent_Identity=25.7894736842105, Blast_Score=66, Evalue=2e-11, Organism=Drosophila melanogaster, GI24663201, Length=192, Percent_Identity=28.6458333333333, Blast_Score=65, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30238; Mature: 30238
Theoretical pI: Translated: 4.51; Mature: 4.51
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00134 TRYPSIN_HIS ; PS50240 TRYPSIN_DOM
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNSKLLLSSLLLLTLVACTKNEKTNNVELTGSETSIIGGEKADANSPVTASTVSLIYNY CCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCEEEECCCCCCCCCCCCHHEEEEEEEC QGKPYSICTGTLISKNLVLTAAHCLAELQGAEIFVHLGEVLPTEVDETKLLRIAEFETHK CCCEEEEEECHHHHHHHHHHHHHHHHHHCCCEEEEEECHHCCCCCCHHHEEEEEECCCCC EYHLVYNEQGFPVTGRNDVALIKLLLDAPEGAVPVPVLDESVELKAGETLLLAGYGLLNE EEEEEECCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCEEECCCCEEEEECCHHHHH IDNPIPATGLNLVRVPLAKLWESILVTDQTNAKGACSGDSGGPAYLETSKGLVVVGITRG CCCCCCCCCCHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCEEEECCCCEEEEEECCC PHDLAPDCRHFGEYTNASMFKTFILEEAAAMGADAPVFTTERQ CCCCCHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEECCCC >Mature Secondary Structure MLNSKLLLSSLLLLTLVACTKNEKTNNVELTGSETSIIGGEKADANSPVTASTVSLIYNY CCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCEEEECCCCCCCCCCCCHHEEEEEEEC QGKPYSICTGTLISKNLVLTAAHCLAELQGAEIFVHLGEVLPTEVDETKLLRIAEFETHK CCCEEEEEECHHHHHHHHHHHHHHHHHHCCCEEEEEECHHCCCCCCHHHEEEEEECCCCC EYHLVYNEQGFPVTGRNDVALIKLLLDAPEGAVPVPVLDESVELKAGETLLLAGYGLLNE EEEEEECCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCEEECCCCEEEEECCHHHHH IDNPIPATGLNLVRVPLAKLWESILVTDQTNAKGACSGDSGGPAYLETSKGLVVVGITRG CCCCCCCCCCHHHHHHHHHHHHHHEEECCCCCCCCCCCCCCCCEEEECCCCEEEEEECCC PHDLAPDCRHFGEYTNASMFKTFILEEAAAMGADAPVFTTERQ CCCCCHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA