Definition Bdellovibrio bacteriovorus HD100, complete genome.
Accession NC_005363
Length 3,782,950

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The map label for this gene is 42522911

Identifier: 42522911

GI number: 42522911

Start: 1319913

End: 1321013

Strand: Direct

Name: 42522911

Synonym: Bd1393

Alternate gene names: NA

Gene position: 1319913-1321013 (Clockwise)

Preceding gene: 42522909

Following gene: 42522913

Centisome position: 34.89

GC content: 50.59

Gene sequence:

>1101_bases
ATGAATATAAATCAAAGCCTGCTTTGCGAGTTCGTCATCAAGGGTTTGGTCTCTTATAAAAAAGAATTACGCGGGCCTTT
CTTGCAGGATTTTCGGCAGCAGTTTGCCAGCCTGAGTCCAGAAGAAGTGGCAGAGGCCTTTATTGATGTCACCTTTCTGG
GGTCGGCTCTGACCTTTCTGCAGGGGGAGCAGTGGAACCTGAAAAAGGATCCTGATACCAGCTCCGAAAATTATCTTCGT
TTCACCGAACAGACCTTTGCCTCCAATCTTTTGTCTTTGAATTATCTGCAGGAAACCCTGCAAACCTTGAATGCAAAAGA
ACTGCGCCAGACGGCCGAGCTCTGTGAAGAGCTGGAGCGTCTGCTGTTGTCCCACGTTCAGTCAGCGAGTCAGGAACAGA
AAAACCGCTTTGTGGCCAGAGCCCTGCAGTTGATGGAAAATGTCTTTGCTCATGAAAACACGCTGTCGTTGCAGGGAAAC
ATCCAGGCTCGTTCCCTGGCGCTTTCTTTGTATCGCACTTTCGACGGTCTGGATCAGATCTTTGGTTTGAACTATGACGC
CGACGTGGGAATGAAAACTGACGTGAACGGCACTGAAAGATTGTATGAAGGGGCGGGCCTTGGTGTGCAGTCTTCGTATT
CAACGTTGCTGACGGCTTTGCGCGAAGTGCAGGCGTCACAAGGAACACGCTTCATTGATCTGGGTTCCGGTTATGGACGG
GTGGGCCTGGTGGTGGGTGTGCTCAGGCCGGACATTGACTTTATCGGGTACGAGTACGTCAAACACCGCGTGGATATTTC
CAACGAATCCACGGCCAAGTTCGGTTTGCAGGATCACGTGCATTTTTTCACGCAGGATCTTTCTGAAAAAGACTTCCGCA
TCCCCGATGCCGAGGTCTATTACATGTTTGATCCGTTCAGCAAAGACACCTATCAGCATGTCTTGAATCAATTGGTGGAA
GTTTCGCGCCGTCAAAGAATTGTCGTGGTCACCAAGGGCAATGCACGATTGTGGCTGAAGGAAATCGCCGAACGCGAAGG
TTGGTTGCCAGGTCAGGAGTTTGACGGCGGCAATCTGTCGCTGTTCCGTTCGCGCGAATAG

Upstream 100 bases:

>100_bases
AGGAGGCCGCCCAGGTCAAATTCTTTTTGGAAACAGCGGAGGTCGGGCGTTATTTTCATAAATTCCGCTTATTTCCACGA
AGCCATGCTAAGCTTTATAT

Downstream 100 bases:

>100_bases
TTACTTTACAAATTTGACCTGGAACTTTTGACCTTTGATGCGGCCGTCACGCAACTTTTGCATGGCGCCGTCCGCGACTT
TCGCAGACACCGCCACAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 366; Mature: 366

Protein sequence:

>366_residues
MNINQSLLCEFVIKGLVSYKKELRGPFLQDFRQQFASLSPEEVAEAFIDVTFLGSALTFLQGEQWNLKKDPDTSSENYLR
FTEQTFASNLLSLNYLQETLQTLNAKELRQTAELCEELERLLLSHVQSASQEQKNRFVARALQLMENVFAHENTLSLQGN
IQARSLALSLYRTFDGLDQIFGLNYDADVGMKTDVNGTERLYEGAGLGVQSSYSTLLTALREVQASQGTRFIDLGSGYGR
VGLVVGVLRPDIDFIGYEYVKHRVDISNESTAKFGLQDHVHFFTQDLSEKDFRIPDAEVYYMFDPFSKDTYQHVLNQLVE
VSRRQRIVVVTKGNARLWLKEIAEREGWLPGQEFDGGNLSLFRSRE

Sequences:

>Translated_366_residues
MNINQSLLCEFVIKGLVSYKKELRGPFLQDFRQQFASLSPEEVAEAFIDVTFLGSALTFLQGEQWNLKKDPDTSSENYLR
FTEQTFASNLLSLNYLQETLQTLNAKELRQTAELCEELERLLLSHVQSASQEQKNRFVARALQLMENVFAHENTLSLQGN
IQARSLALSLYRTFDGLDQIFGLNYDADVGMKTDVNGTERLYEGAGLGVQSSYSTLLTALREVQASQGTRFIDLGSGYGR
VGLVVGVLRPDIDFIGYEYVKHRVDISNESTAKFGLQDHVHFFTQDLSEKDFRIPDAEVYYMFDPFSKDTYQHVLNQLVE
VSRRQRIVVVTKGNARLWLKEIAEREGWLPGQEFDGGNLSLFRSRE
>Mature_366_residues
MNINQSLLCEFVIKGLVSYKKELRGPFLQDFRQQFASLSPEEVAEAFIDVTFLGSALTFLQGEQWNLKKDPDTSSENYLR
FTEQTFASNLLSLNYLQETLQTLNAKELRQTAELCEELERLLLSHVQSASQEQKNRFVARALQLMENVFAHENTLSLQGN
IQARSLALSLYRTFDGLDQIFGLNYDADVGMKTDVNGTERLYEGAGLGVQSSYSTLLTALREVQASQGTRFIDLGSGYGR
VGLVVGVLRPDIDFIGYEYVKHRVDISNESTAKFGLQDHVHFFTQDLSEKDFRIPDAEVYYMFDPFSKDTYQHVLNQLVE
VSRRQRIVVVTKGNARLWLKEIAEREGWLPGQEFDGGNLSLFRSRE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41722; Mature: 41722

Theoretical pI: Translated: 4.81; Mature: 4.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNINQSLLCEFVIKGLVSYKKELRGPFLQDFRQQFASLSPEEVAEAFIDVTFLGSALTFL
CCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
QGEQWNLKKDPDTSSENYLRFTEQTFASNLLSLNYLQETLQTLNAKELRQTAELCEELER
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
LLLSHVQSASQEQKNRFVARALQLMENVFAHENTLSLQGNIQARSLALSLYRTFDGLDQI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHH
FGLNYDADVGMKTDVNGTERLYEGAGLGVQSSYSTLLTALREVQASQGTRFIDLGSGYGR
HCCCCCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCCH
VGLVVGVLRPDIDFIGYEYVKHRVDISNESTAKFGLQDHVHFFTQDLSEKDFRIPDAEVY
HHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHCCHHHHHHHHHHHCCCCCCCCCCCEEE
YMFDPFSKDTYQHVLNQLVEVSRRQRIVVVTKGNARLWLKEIAEREGWLPGQEFDGGNLS
EEECCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCEE
LFRSRE
EEECCC
>Mature Secondary Structure
MNINQSLLCEFVIKGLVSYKKELRGPFLQDFRQQFASLSPEEVAEAFIDVTFLGSALTFL
CCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHH
QGEQWNLKKDPDTSSENYLRFTEQTFASNLLSLNYLQETLQTLNAKELRQTAELCEELER
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
LLLSHVQSASQEQKNRFVARALQLMENVFAHENTLSLQGNIQARSLALSLYRTFDGLDQI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHH
FGLNYDADVGMKTDVNGTERLYEGAGLGVQSSYSTLLTALREVQASQGTRFIDLGSGYGR
HCCCCCCCCCCCCCCCHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCCCCH
VGLVVGVLRPDIDFIGYEYVKHRVDISNESTAKFGLQDHVHFFTQDLSEKDFRIPDAEVY
HHHHHHHHCCCHHHHHHHHHHHHHCCCCCCHHHCCHHHHHHHHHHHCCCCCCCCCCCEEE
YMFDPFSKDTYQHVLNQLVEVSRRQRIVVVTKGNARLWLKEIAEREGWLPGQEFDGGNLS
EEECCCCCHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCEE
LFRSRE
EEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA